RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 PPP2R2DQ66LE6 453 aa12.77□□□□□ -0.37
TRIM56-201ENST00000306085 CTRB2Q6GPI1 263 aa12.77□□□□□ -0.37
TRIM56-201ENST00000306085 DBX2Q6ZNG2 339 aa12.77□□□□□ -0.37
TRIM56-201ENST00000306085 SHFQ7M4L6 423 aa12.77□□□□□ -0.37
TRIM56-201ENST00000306085 KCND1Q9NSA2 647 aa12.77□□□□□ -0.37
TRIM56-201ENST00000306085 HTRA2O43464 458 aaPredicted RBP12.77□□□□□ -0.37
TRIM56-201ENST00000306085 RAD1O60671 282 aa12.77□□□□□ -0.37
TRIM56-201ENST00000306085 GPR143P51810 404 aa12.77□□□□□ -0.37
TRIM56-201ENST00000306085 DLX2Q07687 328 aaPredicted RBP12.77□□□□□ -0.37
TRIM56-201ENST00000306085 ZNF662Q6ZS27 426 aa12.77□□□□□ -0.37
TRIM56-201ENST00000306085 OR4K14Q8NGD5 310 aa12.77□□□□□ -0.37
TRIM56-201ENST00000306085 HEBP1Q9NRV9 189 aa12.77□□□□□ -0.37
TRIM56-201ENST00000306085 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.77□□□□□ -0.37
TRIM56-201ENST00000306085 TGM1P22735 817 aa12.77□□□□□ -0.37
TRIM56-201ENST00000306085 GRM5P41594 1212 aa12.77□□□□□ -0.37
TRIM56-201ENST00000306085 AKR1C1Q04828 323 aa12.77□□□□□ -0.37
TRIM56-201ENST00000306085 SLC22A6Q4U2R8 563 aa12.77□□□□□ -0.37
TRIM56-201ENST00000306085 CCDC116Q8IYX3 515 aa12.77□□□□□ -0.37
TRIM56-201ENST00000306085 KRTCAP2Q8N6L1 136 aa12.77□□□□□ -0.37
TRIM56-201ENST00000306085 NXF5Q9H1B4 397 aaKnown RBP12.77□□□□□ -0.37
TRIM56-201ENST00000306085 AKAIN1P0CW23 69 aa12.77□□□□□ -0.37
TRIM56-201ENST00000306085 SCGB1C2P0DMR2 95 aa12.77□□□□□ -0.37
TRIM56-201ENST00000306085 PRSS3P35030 304 aa12.77□□□□□ -0.37
TRIM56-201ENST00000306085 RPS26P62854 115 aaKnown RBP12.77□□□□□ -0.37
TRIM56-201ENST00000306085 MGAT3Q09327 533 aa12.77□□□□□ -0.37
TRIM56-201ENST00000306085 SPANXN4Q5MJ08 99 aa12.77□□□□□ -0.37
TRIM56-201ENST00000306085 CNIH2Q6PI25 160 aa12.77□□□□□ -0.37
TRIM56-201ENST00000306085 KBTBD6Q86V97 674 aa12.77□□□□□ -0.37
TRIM56-201ENST00000306085 IQCKQ8N0W5 287 aa12.77□□□□□ -0.37
TRIM56-201ENST00000306085 SFXN5Q8TD22 340 aa12.77□□□□□ -0.37
TRIM56-201ENST00000306085 IRGQQ8WZA9 623 aa12.77□□□□□ -0.37
TRIM56-201ENST00000306085 BPIFA2Q96DR5 249 aa12.77□□□□□ -0.37
TRIM56-201ENST00000306085 RNF170Q96K19 258 aa12.77□□□□□ -0.37
TRIM56-201ENST00000306085 TMEM59Q9BXS4 323 aa12.77□□□□□ -0.37
TRIM56-201ENST00000306085 SCN3AQ9NY46 2000 aa12.76□□□□□ -0.37
TRIM56-201ENST00000306085 ENSAO43768 121 aaKnown RBP12.76□□□□□ -0.37
TRIM56-201ENST00000306085 BCKDHBP21953 392 aa12.76□□□□□ -0.37
TRIM56-201ENST00000306085 UPP1Q16831 310 aa12.76□□□□□ -0.37
TRIM56-201ENST00000306085 KIAA0895LQ68EN5 471 aa12.76□□□□□ -0.37
TRIM56-201ENST00000306085 DEFB118Q96PH6 123 aa12.76□□□□□ -0.37
TRIM56-201ENST00000306085 ADAMTS10Q9H324 1103 aa12.76□□□□□ -0.37
TRIM56-201ENST00000306085 RHBDL3P58872 404 aa12.76□□□□□ -0.37
TRIM56-201ENST00000306085 RPS27LQ71UM5 84 aaKnown RBP12.76□□□□□ -0.37
TRIM56-201ENST00000306085 OR4F6Q8NGB9 312 aa12.76□□□□□ -0.37
TRIM56-201ENST00000306085 LGALS12Q96DT0 336 aa12.76□□□□□ -0.37
TRIM56-201ENST00000306085 HLA-AP01891 365 aaKnown RBP12.76□□□□□ -0.37
TRIM56-201ENST00000306085 STSP08842 583 aa12.76□□□□□ -0.37
TRIM56-201ENST00000306085 ZDHHC11BP0C7U3 371 aa12.76□□□□□ -0.37
TRIM56-201ENST00000306085 CBSLP0DN79 551 aa12.76□□□□□ -0.37
TRIM56-201ENST00000306085 CBSP35520 551 aa12.76□□□□□ -0.37
TRIM56-201ENST00000306085 GPR50Q13585 617 aa12.76□□□□□ -0.37
TRIM56-201ENST00000306085 HNF4GQ14541 408 aa12.76□□□□□ -0.37
TRIM56-201ENST00000306085 METTL2BQ6P1Q9 378 aaKnown RBP12.76□□□□□ -0.37
TRIM56-201ENST00000306085 NOXA1Q86UR1 476 aa12.76□□□□□ -0.37
TRIM56-201ENST00000306085 NANOS1Q8WY41 292 aaKnown RBP12.76□□□□□ -0.37
TRIM56-201ENST00000306085 DPEP3Q9H4B8 488 aa12.76□□□□□ -0.37
TRIM56-201ENST00000306085 SLC23A2Q9UGH3 650 aa12.76□□□□□ -0.37
TRIM56-201ENST00000306085 CEP250Q9BV73 2442 aa12.76□□□□□ -0.37
TRIM56-201ENST00000306085 PTTG1O95997 202 aa12.76□□□□□ -0.37
TRIM56-201ENST00000306085 PTPN2P17706 415 aa12.76□□□□□ -0.37
TRIM56-201ENST00000306085 KREMEN1Q96MU8 473 aa12.76□□□□□ -0.37
TRIM56-201ENST00000306085 MICU1Q9BPX6 476 aa12.76□□□□□ -0.37
TRIM56-201ENST00000306085 WDR18Q9BV38 432 aa12.76□□□□□ -0.37
TRIM56-201ENST00000306085 OR51J1Q9H342 316 aa12.76□□□□□ -0.37
TRIM56-201ENST00000306085 CRHBPP24387 322 aa12.76□□□□□ -0.37
TRIM56-201ENST00000306085 CRYZQ08257 329 aaKnown RBP12.76□□□□□ -0.37
TRIM56-201ENST00000306085 KIAA0319Q5VV43 1072 aa12.76□□□□□ -0.37
TRIM56-201ENST00000306085 ZNF596Q8TC21 504 aa12.76□□□□□ -0.37
TRIM56-201ENST00000306085 SUV39H2Q9H5I1 410 aa12.76□□□□□ -0.37
TRIM56-201ENST00000306085 FBXW11Q9UKB1 542 aa12.76□□□□□ -0.37
TRIM56-201ENST00000306085 GPR52Q9Y2T5 361 aa12.76□□□□□ -0.37
TRIM56-201ENST00000306085 MMP20O60882 483 aa12.76□□□□□ -0.37
TRIM56-201ENST00000306085 KDELR2P33947 212 aa12.76□□□□□ -0.37
TRIM56-201ENST00000306085 LIPJQ5W064 366 aa12.76□□□□□ -0.37
TRIM56-201ENST00000306085 FCRLBQ6BAA4 426 aa12.76□□□□□ -0.37
TRIM56-201ENST00000306085 PIGWQ7Z7B1 504 aa12.76□□□□□ -0.37
TRIM56-201ENST00000306085 UPRTQ96BW1 309 aa12.76□□□□□ -0.37
TRIM56-201ENST00000306085 H0YAE9 185 aa12.76□□□□□ -0.37
TRIM56-201ENST00000306085 KDELR3O43731 214 aa12.76□□□□□ -0.37
TRIM56-201ENST00000306085 APLNRP35414 380 aa12.76□□□□□ -0.37
TRIM56-201ENST00000306085 SPHARQ15513 63 aa12.76□□□□□ -0.37
TRIM56-201ENST00000306085 KIAA0930Q6ICG6 404 aaPredicted RBP12.76□□□□□ -0.37
TRIM56-201ENST00000306085 C6orf120Q7Z4R8 191 aa12.76□□□□□ -0.37
TRIM56-201ENST00000306085 TAC4Q86UU9 113 aa12.76□□□□□ -0.37
TRIM56-201ENST00000306085 DNAJC22Q8N4W6 341 aa12.76□□□□□ -0.37
TRIM56-201ENST00000306085 NDNFQ8TB73 568 aa12.76□□□□□ -0.37
TRIM56-201ENST00000306085 GPN2Q9H9Y4 310 aaPredicted RBP12.76□□□□□ -0.37
TRIM56-201ENST00000306085 PRODH2Q9UF12 536 aa12.76□□□□□ -0.37
TRIM56-201ENST00000306085 AK6Q9Y3D8 172 aaKnown RBP12.76□□□□□ -0.37
TRIM56-201ENST00000306085 NCOA3Q9Y6Q9 1424 aa12.76□□□□□ -0.37
TRIM56-201ENST00000306085 A8MT66 165 aa12.76□□□□□ -0.37
TRIM56-201ENST00000306085 NKX3-2P78367 333 aa12.76□□□□□ -0.37
TRIM56-201ENST00000306085 MEF2AQ02078 507 aaPredicted RBP12.76□□□□□ -0.37
TRIM56-201ENST00000306085 ARL6IP1Q15041 203 aa12.76□□□□□ -0.37
TRIM56-201ENST00000306085 SPATS1Q496A3 300 aa12.76□□□□□ -0.37
TRIM56-201ENST00000306085 TSSK4Q6SA08 328 aa12.76□□□□□ -0.37
TRIM56-201ENST00000306085 DDIT4LQ96D03 193 aa12.76□□□□□ -0.37
TRIM56-201ENST00000306085 NUBP2Q9Y5Y2 271 aa12.76□□□□□ -0.37
TRIM56-201ENST00000306085 KDM6BO15054 1643 aa12.76□□□□□ -0.37
TRIM56-201ENST00000306085 SLC38A8A6NNN8 435 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms