RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 OR9A2Q8NGT5 310 aa13.2□□□□□ -0.3
PRKCB-201ENST00000303531 SCGB1C1Q8TD33 95 aa13.2□□□□□ -0.3
PRKCB-201ENST00000303531 NECAB3Q96P71 396 aaPredicted RBP13.2□□□□□ -0.3
PRKCB-201ENST00000303531 AKR1C4P17516 323 aa13.2□□□□□ -0.3
PRKCB-201ENST00000303531 SOX3P41225 446 aa13.2□□□□□ -0.3
PRKCB-201ENST00000303531 FAM69BQ5VUD6 431 aa13.2□□□□□ -0.3
PRKCB-201ENST00000303531 MAMDC2Q7Z304 686 aaPredicted RBP13.2□□□□□ -0.3
PRKCB-201ENST00000303531 HOXB13Q92826 284 aaPredicted RBP13.2□□□□□ -0.3
PRKCB-201ENST00000303531 BADQ92934 168 aa13.2□□□□□ -0.3
PRKCB-201ENST00000303531 TCEAL4Q96EI5 215 aa13.2□□□□□ -0.3
PRKCB-201ENST00000303531 SLC26A5P58743 744 aa13.2□□□□□ -0.3
PRKCB-201ENST00000303531 OR5AK2Q8NH90 309 aa13.2□□□□□ -0.3
PRKCB-201ENST00000303531 CAPNS1P04632 268 aa13.2□□□□□ -0.3
PRKCB-201ENST00000303531 DDCP20711 480 aa13.2□□□□□ -0.3
PRKCB-201ENST00000303531 BCL2L15Q5TBC7 163 aa13.2□□□□□ -0.3
PRKCB-201ENST00000303531 SERPINA11Q86U17 422 aa13.2□□□□□ -0.3
PRKCB-201ENST00000303531 DCP2Q8IU60 420 aaKnown RBP13.2□□□□□ -0.3
PRKCB-201ENST00000303531 CPOQ8IVL8 374 aa13.2□□□□□ -0.3
PRKCB-201ENST00000303531 GDPD1Q8N9F7 314 aa13.2□□□□□ -0.3
PRKCB-201ENST00000303531 ADAMTS18Q8TE60 1221 aa13.2□□□□□ -0.3
PRKCB-201ENST00000303531 TFAP2CQ92754 450 aa13.2□□□□□ -0.3
PRKCB-201ENST00000303531 RDH14Q9HBH5 336 aa13.2□□□□□ -0.3
PRKCB-201ENST00000303531 DNAJC25-GNG10A0A024R161 153 aa13.2□□□□□ -0.3
PRKCB-201ENST00000303531 MBLAC1A4D2B0 266 aaPredicted RBP13.2□□□□□ -0.3
PRKCB-201ENST00000303531 LSSP48449 732 aa13.2□□□□□ -0.3
PRKCB-201ENST00000303531 NSDHLQ15738 373 aa13.2□□□□□ -0.3
PRKCB-201ENST00000303531 OR6C4Q8NGE1 309 aa13.2□□□□□ -0.3
PRKCB-201ENST00000303531 CHFRQ96EP1 664 aa13.2□□□□□ -0.3
PRKCB-201ENST00000303531 TSNAXQ99598 290 aaKnown RBP13.2□□□□□ -0.3
PRKCB-201ENST00000303531 ALG8Q9BVK2 526 aa13.2□□□□□ -0.3
PRKCB-201ENST00000303531 GPN2Q9H9Y4 310 aaPredicted RBP13.2□□□□□ -0.3
PRKCB-201ENST00000303531 COPZ2Q9P299 210 aa13.2□□□□□ -0.3
PRKCB-201ENST00000303531 GPR45Q9Y5Y3 372 aa13.2□□□□□ -0.3
PRKCB-201ENST00000303531 ZNF705EA8MWA4 302 aaPredicted RBP13.2□□□□□ -0.3
PRKCB-201ENST00000303531 B4GAT1O43505 415 aa13.2□□□□□ -0.3
PRKCB-201ENST00000303531 POU3F4P49335 361 aa13.2□□□□□ -0.3
PRKCB-201ENST00000303531 GRIN2CQ14957 1233 aa13.2□□□□□ -0.3
PRKCB-201ENST00000303531 PIWIL3Q7Z3Z3 882 aaKnown RBP13.2□□□□□ -0.3
PRKCB-201ENST00000303531 ZDHHC1Q8WTX9 485 aa13.2□□□□□ -0.3
PRKCB-201ENST00000303531 FKBP10Q96AY3 582 aa13.2□□□□□ -0.3
PRKCB-201ENST00000303531 SORBS1Q9BX66 1292 aaKnown RBP13.2□□□□□ -0.3
PRKCB-201ENST00000303531 ENPP5Q9UJA9 477 aa13.2□□□□□ -0.3
PRKCB-201ENST00000303531 GRXCR2A6NFK2 248 aa13.19□□□□□ -0.3
PRKCB-201ENST00000303531 KCNJ13O60928 360 aa13.19□□□□□ -0.3
PRKCB-201ENST00000303531 SLC10A3P09131 477 aa13.19□□□□□ -0.3
PRKCB-201ENST00000303531 CA5AP35218 305 aa13.19□□□□□ -0.3
PRKCB-201ENST00000303531 HTR2BP41595 481 aa13.19□□□□□ -0.3
PRKCB-201ENST00000303531 FGL1Q08830 312 aa13.19□□□□□ -0.3
PRKCB-201ENST00000303531 MFSD8Q8NHS3 518 aa13.19□□□□□ -0.3
PRKCB-201ENST00000303531 ZFYVE21Q9BQ24 234 aa13.19□□□□□ -0.3
PRKCB-201ENST00000303531 WASH4PA8MWX3 477 aa13.19□□□□□ -0.3
PRKCB-201ENST00000303531 EEF1E1-BLOC1S5C9J1V9 151 aa13.19□□□□□ -0.3
PRKCB-201ENST00000303531 PRAMEF2O60811 474 aa13.19□□□□□ -0.3
PRKCB-201ENST00000303531 TUBG1P23258 451 aa13.19□□□□□ -0.3
PRKCB-201ENST00000303531 HTR2AP28223 471 aa13.19□□□□□ -0.3
PRKCB-201ENST00000303531 SOX9P48436 509 aa13.19□□□□□ -0.3
PRKCB-201ENST00000303531 MRPL49Q13405 166 aaKnown RBP13.19□□□□□ -0.3
PRKCB-201ENST00000303531 RNASE10Q5GAN6 216 aaKnown RBP13.19□□□□□ -0.3
PRKCB-201ENST00000303531 GARNL3Q5VVW2 1013 aa13.19□□□□□ -0.3
PRKCB-201ENST00000303531 ALDH16A1Q8IZ83 802 aa13.19□□□□□ -0.3
PRKCB-201ENST00000303531 C3orf58Q8NDZ4 430 aa13.19□□□□□ -0.3
PRKCB-201ENST00000303531 GATA6Q92908 595 aa13.19□□□□□ -0.3
PRKCB-201ENST00000303531 KLHL9Q9P2J3 617 aa13.19□□□□□ -0.3
PRKCB-201ENST00000303531 RABL2AQ9UBK7 228 aaPredicted RBP13.19□□□□□ -0.3
PRKCB-201ENST00000303531 RABL2BQ9UNT1 228 aa13.19□□□□□ -0.3
PRKCB-201ENST00000303531 DRGXA6NNA5 263 aa13.19□□□□□ -0.3
PRKCB-201ENST00000303531 NPR2P20594 1047 aa13.19□□□□□ -0.3
PRKCB-201ENST00000303531 DRD5P21918 477 aa13.19□□□□□ -0.3
PRKCB-201ENST00000303531 SNRPD2P62316 118 aaKnown RBP13.19□□□□□ -0.3
PRKCB-201ENST00000303531 METTL2BQ6P1Q9 378 aaKnown RBP13.19□□□□□ -0.3
PRKCB-201ENST00000303531 OR5D16Q8NGK9 328 aa13.19□□□□□ -0.3
PRKCB-201ENST00000303531 MAFIPQ8WZ33 124 aa13.19□□□□□ -0.3
PRKCB-201ENST00000303531 ZNF597Q96LX8 424 aa13.19□□□□□ -0.3
PRKCB-201ENST00000303531 SERINC2Q96SA4 455 aa13.19□□□□□ -0.3
PRKCB-201ENST00000303531 TMEM121BQ9BXQ6 578 aaPredicted RBP13.19□□□□□ -0.3
PRKCB-201ENST00000303531 FAIMQ9NVQ4 179 aa13.19□□□□□ -0.3
PRKCB-201ENST00000303531 A6NHS1 94 aa13.19□□□□□ -0.3
PRKCB-201ENST00000303531 CTSAP10619 480 aa13.19□□□□□ -0.3
PRKCB-201ENST00000303531 GGT2P36268 569 aa13.19□□□□□ -0.3
PRKCB-201ENST00000303531 PTH2RP49190 550 aa13.19□□□□□ -0.3
PRKCB-201ENST00000303531 HSD11B1LQ7Z5J1 315 aa13.19□□□□□ -0.3
PRKCB-201ENST00000303531 UTP4Q969X6 686 aaKnown RBP13.19□□□□□ -0.3
PRKCB-201ENST00000303531 CUEDC1Q9NWM3 386 aaPredicted RBP13.19□□□□□ -0.3
PRKCB-201ENST00000303531 PCDH10Q9P2E7 1040 aa13.19□□□□□ -0.3
PRKCB-201ENST00000303531 SSX5O60225 188 aa13.19□□□□□ -0.3
PRKCB-201ENST00000303531 IFNA2P01563 188 aa13.19□□□□□ -0.3
PRKCB-201ENST00000303531 TMEM53Q6P2H8 277 aa13.19□□□□□ -0.3
PRKCB-201ENST00000303531 CYB561A3Q8NBI2 242 aa13.19□□□□□ -0.3
PRKCB-201ENST00000303531 OR5L2Q8NGL0 311 aa13.19□□□□□ -0.3
PRKCB-201ENST00000303531 STRADBQ9C0K7 418 aa13.19□□□□□ -0.3
PRKCB-201ENST00000303531 PCDHA9Q9Y5H5 950 aa13.19□□□□□ -0.3
PRKCB-201ENST00000303531 FUOMA2VDF0 154 aa13.19□□□□□ -0.3
PRKCB-201ENST00000303531 FAM171A2A8MVW0 826 aa13.19□□□□□ -0.3
PRKCB-201ENST00000303531 KIAA0355O15063 1070 aa13.19□□□□□ -0.3
PRKCB-201ENST00000303531 LYRM1O43325 122 aa13.19□□□□□ -0.3
PRKCB-201ENST00000303531 FRS3O43559 492 aa13.19□□□□□ -0.3
PRKCB-201ENST00000303531 ZNF888P0CJ79 500 aaPredicted RBP13.19□□□□□ -0.3
PRKCB-201ENST00000303531 PRKXP51817 358 aa13.19□□□□□ -0.3
PRKCB-201ENST00000303531 EFR3AQ14156 821 aa13.19□□□□□ -0.3
PRKCB-201ENST00000303531 SLC22A10Q63ZE4 541 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms