RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 AP1M2Q9Y6Q5 423 aa12.87□□□□□ -0.35
CHRFAM7A-201ENST00000299847 TRAV18A0A075B6X5 111 aa12.87□□□□□ -0.35
CHRFAM7A-201ENST00000299847 B8ZZF3 427 aa12.87□□□□□ -0.35
CHRFAM7A-201ENST00000299847 SHOXO15266 292 aa12.87□□□□□ -0.35
CHRFAM7A-201ENST00000299847 APEHP13798 732 aaKnown RBP12.87□□□□□ -0.35
CHRFAM7A-201ENST00000299847 ZNF252P-AS1Q0IIN9 211 aa12.87□□□□□ -0.35
CHRFAM7A-201ENST00000299847 OR5M10Q6IEU7 315 aa12.87□□□□□ -0.35
CHRFAM7A-201ENST00000299847 CCBE1Q6UXH8 406 aaPredicted RBP12.87□□□□□ -0.35
CHRFAM7A-201ENST00000299847 TMEM184CQ9NVA4 438 aa12.87□□□□□ -0.35
CHRFAM7A-201ENST00000299847 DCDC2BA2VCK2 349 aa12.86□□□□□ -0.35
CHRFAM7A-201ENST00000299847 H7C2Y5 167 aa12.86□□□□□ -0.35
CHRFAM7A-201ENST00000299847 NME4O00746 187 aa12.86□□□□□ -0.35
CHRFAM7A-201ENST00000299847 LCKP06239 509 aa12.86□□□□□ -0.35
CHRFAM7A-201ENST00000299847 MTNR1AP48039 350 aa12.86□□□□□ -0.35
CHRFAM7A-201ENST00000299847 CAMLGP49069 296 aa12.86□□□□□ -0.35
CHRFAM7A-201ENST00000299847 UBE2NP61088 152 aaKnown RBP12.86□□□□□ -0.35
CHRFAM7A-201ENST00000299847 TRAM1Q15629 374 aa12.86□□□□□ -0.35
CHRFAM7A-201ENST00000299847 LRRTM3Q86VH5 581 aa12.86□□□□□ -0.35
CHRFAM7A-201ENST00000299847 UEVLDQ8IX04 471 aa12.86□□□□□ -0.35
CHRFAM7A-201ENST00000299847 NUDT21O43809 227 aaKnown RBP12.86□□□□□ -0.35
CHRFAM7A-201ENST00000299847 SEMA4FO95754 770 aa12.86□□□□□ -0.35
CHRFAM7A-201ENST00000299847 HPRP00739 348 aa12.86□□□□□ -0.35
CHRFAM7A-201ENST00000299847 GYPBP06028 91 aa12.86□□□□□ -0.35
CHRFAM7A-201ENST00000299847 S100PP25815 95 aa12.86□□□□□ -0.35
CHRFAM7A-201ENST00000299847 PCGF3Q3KNV8 242 aa12.86□□□□□ -0.35
CHRFAM7A-201ENST00000299847 GRHL2Q6ISB3 625 aa12.86□□□□□ -0.35
CHRFAM7A-201ENST00000299847 COMMD7Q86VX2 200 aa12.86□□□□□ -0.35
CHRFAM7A-201ENST00000299847 OR5H2Q8NGV7 314 aa12.86□□□□□ -0.35
CHRFAM7A-201ENST00000299847 SDSLQ96GA7 329 aa12.86□□□□□ -0.35
CHRFAM7A-201ENST00000299847 PAPOLGQ9BWT3 736 aaKnown RBP12.86□□□□□ -0.35
CHRFAM7A-201ENST00000299847 SAV1Q9H4B6 383 aaPredicted RBP12.86□□□□□ -0.35
CHRFAM7A-201ENST00000299847 ASF1BQ9NVP2 202 aa12.86□□□□□ -0.35
CHRFAM7A-201ENST00000299847 PTBP2Q9UKA9 531 aaKnown RBP12.86□□□□□ -0.35
CHRFAM7A-201ENST00000299847 RARRES3Q9UL19 164 aa12.86□□□□□ -0.35
CHRFAM7A-201ENST00000299847 SLC22A31A6NKX4 558 aa12.86□□□□□ -0.35
CHRFAM7A-201ENST00000299847 SYT7O43581 403 aa12.86□□□□□ -0.35
CHRFAM7A-201ENST00000299847 SPDEFO95238 335 aa12.86□□□□□ -0.35
CHRFAM7A-201ENST00000299847 LUMP51884 338 aaPredicted RBP12.86□□□□□ -0.35
CHRFAM7A-201ENST00000299847 CSNK2A1P68400 391 aaPredicted RBP12.86□□□□□ -0.35
CHRFAM7A-201ENST00000299847 STK11Q15831 433 aa12.86□□□□□ -0.35
CHRFAM7A-201ENST00000299847 SPATS1Q496A3 300 aa12.86□□□□□ -0.35
CHRFAM7A-201ENST00000299847 TEX26Q8N6G2 289 aa12.86□□□□□ -0.35
CHRFAM7A-201ENST00000299847 ASCC1Q8N9N2 400 aaKnown RBP12.86□□□□□ -0.35
CHRFAM7A-201ENST00000299847 CSNK2A3Q8NEV1 391 aa12.86□□□□□ -0.35
CHRFAM7A-201ENST00000299847 RAB7BQ96AH8 199 aa12.86□□□□□ -0.35
CHRFAM7A-201ENST00000299847 CPEB1Q9BZB8 566 aaKnown RBP12.86□□□□□ -0.35
CHRFAM7A-201ENST00000299847 HSD3B1P14060 373 aa12.86□□□□□ -0.35
CHRFAM7A-201ENST00000299847 ETV4P43268 484 aa12.86□□□□□ -0.35
CHRFAM7A-201ENST00000299847 LBX1P52954 281 aa12.86□□□□□ -0.35
CHRFAM7A-201ENST00000299847 P2RY14Q15391 338 aa12.86□□□□□ -0.35
CHRFAM7A-201ENST00000299847 RGNQ15493 299 aa12.86□□□□□ -0.35
CHRFAM7A-201ENST00000299847 GSG1LQ6UXU4 331 aa12.86□□□□□ -0.35
CHRFAM7A-201ENST00000299847 HERPUD2Q9BSE4 406 aa12.86□□□□□ -0.35
CHRFAM7A-201ENST00000299847 PRDM9Q9NQV7 894 aa12.86□□□□□ -0.35
CHRFAM7A-201ENST00000299847 GABRR1P24046 479 aa12.86□□□□□ -0.35
CHRFAM7A-201ENST00000299847 IL4RP24394 825 aa12.86□□□□□ -0.35
CHRFAM7A-201ENST00000299847 DCKP27707 260 aa12.86□□□□□ -0.35
CHRFAM7A-201ENST00000299847 CLDN8P56748 225 aa12.86□□□□□ -0.35
CHRFAM7A-201ENST00000299847 ELAVL3Q14576 367 aaKnown RBP12.86□□□□□ -0.35
CHRFAM7A-201ENST00000299847 SERINC5Q86VE9 423 aa12.86□□□□□ -0.35
CHRFAM7A-201ENST00000299847 ALDH16A1Q8IZ83 802 aa12.86□□□□□ -0.35
CHRFAM7A-201ENST00000299847 MDGA1Q8NFP4 955 aa12.86□□□□□ -0.35
CHRFAM7A-201ENST00000299847 ADAM18Q9Y3Q7 739 aa12.86□□□□□ -0.35
CHRFAM7A-201ENST00000299847 DLG5Q8TDM6 1919 aa12.86□□□□□ -0.35
CHRFAM7A-201ENST00000299847 RDH16O75452 317 aa12.85□□□□□ -0.35
CHRFAM7A-201ENST00000299847 DIRAS3O95661 229 aa12.85□□□□□ -0.35
CHRFAM7A-201ENST00000299847 PFKMP08237 780 aa12.85□□□□□ -0.35
CHRFAM7A-201ENST00000299847 CAPN3P20807 821 aa12.85□□□□□ -0.35
CHRFAM7A-201ENST00000299847 ELP2Q6IA86 826 aa12.85□□□□□ -0.35
CHRFAM7A-201ENST00000299847 TMEM205Q6UW68 189 aa12.85□□□□□ -0.35
CHRFAM7A-201ENST00000299847 ISCA2Q86U28 154 aa12.85□□□□□ -0.35
CHRFAM7A-201ENST00000299847 ALOXE3Q9BYJ1 711 aa12.85□□□□□ -0.35
CHRFAM7A-201ENST00000299847 PCDHGA7Q9Y5G6 932 aa12.85□□□□□ -0.35
CHRFAM7A-201ENST00000299847 A0A1W2PQL4 384 aaPredicted RBP12.85□□□□□ -0.35
CHRFAM7A-201ENST00000299847 CDC14CA4D256 554 aa12.85□□□□□ -0.35
CHRFAM7A-201ENST00000299847 A8MVJ9 347 aa12.85□□□□□ -0.35
CHRFAM7A-201ENST00000299847 POU4F2Q12837 409 aa12.85□□□□□ -0.35
CHRFAM7A-201ENST00000299847 CLLU1OSQ5K130 101 aa12.85□□□□□ -0.35
CHRFAM7A-201ENST00000299847 C9orf135Q5VTT2 229 aa12.85□□□□□ -0.35
CHRFAM7A-201ENST00000299847 GPR139Q6DWJ6 353 aa12.85□□□□□ -0.35
CHRFAM7A-201ENST00000299847 ACBD7Q8N6N7 88 aa12.85□□□□□ -0.35
CHRFAM7A-201ENST00000299847 ZNF420Q8TAQ5 688 aaPredicted RBP12.85□□□□□ -0.35
CHRFAM7A-201ENST00000299847 CDS1Q92903 461 aa12.85□□□□□ -0.35
CHRFAM7A-201ENST00000299847 TMEM9Q9P0T7 183 aa12.85□□□□□ -0.35
CHRFAM7A-201ENST00000299847 RHBDD3Q9Y3P4 386 aa12.85□□□□□ -0.35
CHRFAM7A-201ENST00000299847 NEURL4Q96JN8 1562 aa12.85□□□□□ -0.35
CHRFAM7A-201ENST00000299847 FAM230AA0A1W2PPH8 454 aa12.85□□□□□ -0.35
CHRFAM7A-201ENST00000299847 UBFD1O14562 309 aaKnown RBP12.85□□□□□ -0.35
CHRFAM7A-201ENST00000299847 AGPAT2O15120 278 aa12.85□□□□□ -0.35
CHRFAM7A-201ENST00000299847 DUSP3P51452 185 aaPredicted RBP12.85□□□□□ -0.35
CHRFAM7A-201ENST00000299847 OR7A5Q15622 319 aa12.85□□□□□ -0.35
CHRFAM7A-201ENST00000299847 SLC39A5Q6ZMH5 540 aa12.85□□□□□ -0.35
CHRFAM7A-201ENST00000299847 TAS1R1Q7RTX1 841 aa12.85□□□□□ -0.35
CHRFAM7A-201ENST00000299847 ACTRT3Q9BYD9 372 aa12.85□□□□□ -0.35
CHRFAM7A-201ENST00000299847 PLEKHA3Q9HB20 300 aa12.85□□□□□ -0.35
CHRFAM7A-201ENST00000299847 ANKMY1Q9P2S6 941 aa12.85□□□□□ -0.35
CHRFAM7A-201ENST00000299847 LIPT1Q9Y234 373 aa12.85□□□□□ -0.35
CHRFAM7A-201ENST00000299847 DOK2O60496 412 aa12.85□□□□□ -0.35
CHRFAM7A-201ENST00000299847 CEBPBP17676 345 aa12.85□□□□□ -0.35
CHRFAM7A-201ENST00000299847 P2RY2P41231 377 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms