RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 OSTF1Q92882 214 aa12.76□□□□□ -0.37
CDH8-201ENST00000299345 UFD1Q92890 307 aa12.76□□□□□ -0.37
CDH8-201ENST00000299345 CDS1Q92903 461 aa12.76□□□□□ -0.37
CDH8-201ENST00000299345 CDCA3Q99618 268 aaPredicted RBP12.76□□□□□ -0.37
CDH8-201ENST00000299345 RSPO3Q9BXY4 272 aaPredicted RBP12.76□□□□□ -0.37
CDH8-201ENST00000299345 LRRK1Q38SD2 2015 aa12.76□□□□□ -0.37
CDH8-201ENST00000299345 AQP9O43315 295 aa12.76□□□□□ -0.37
CDH8-201ENST00000299345 PBX2P40425 430 aa12.76□□□□□ -0.37
CDH8-201ENST00000299345 WNT4P56705 351 aa12.76□□□□□ -0.37
CDH8-201ENST00000299345 ILF3Q12906 894 aaKnown RBP eCLIP12.76□□□□□ -0.37
CDH8-201ENST00000299345 OR2G6Q5TZ20 316 aa12.76□□□□□ -0.37
CDH8-201ENST00000299345 LHFPL3Q86UP9 236 aa12.76□□□□□ -0.37
CDH8-201ENST00000299345 NRMQ8IXM6 262 aa12.76□□□□□ -0.37
CDH8-201ENST00000299345 CAMKVQ8NCB2 501 aa12.76□□□□□ -0.37
CDH8-201ENST00000299345 KCTD7Q96MP8 289 aa12.76□□□□□ -0.37
CDH8-201ENST00000299345 MS4A4EQ96PG1 132 aa12.76□□□□□ -0.37
CDH8-201ENST00000299345 NELL2Q99435 816 aa12.76□□□□□ -0.37
CDH8-201ENST00000299345 CCDC3Q9BQI4 270 aa12.76□□□□□ -0.37
CDH8-201ENST00000299345 MTHFD2LQ9H903 347 aaPredicted RBP12.76□□□□□ -0.37
CDH8-201ENST00000299345 UGT2A1Q9Y4X1 527 aa12.76□□□□□ -0.37
CDH8-201ENST00000299345 CEP290O15078 2479 aa12.76□□□□□ -0.37
CDH8-201ENST00000299345 H0Y8X5 98 aa12.76□□□□□ -0.37
CDH8-201ENST00000299345 RFXAPO00287 272 aa12.76□□□□□ -0.37
CDH8-201ENST00000299345 UBXN7O94888 489 aa12.76□□□□□ -0.37
CDH8-201ENST00000299345 GNSP15586 552 aa12.76□□□□□ -0.37
CDH8-201ENST00000299345 PAICSP22234 425 aaKnown RBP12.76□□□□□ -0.37
CDH8-201ENST00000299345 PEBP1P30086 187 aaKnown RBP12.76□□□□□ -0.37
CDH8-201ENST00000299345 SLC16A1P53985 500 aa12.76□□□□□ -0.37
CDH8-201ENST00000299345 ENTPD8Q5MY95 495 aa12.76□□□□□ -0.37
CDH8-201ENST00000299345 ANKRD54Q6NXT1 300 aa12.76□□□□□ -0.37
CDH8-201ENST00000299345 PHC2Q8IXK0 858 aa12.76□□□□□ -0.37
CDH8-201ENST00000299345 ELSPBP1Q96BH3 223 aa12.76□□□□□ -0.37
CDH8-201ENST00000299345 GPA33Q99795 319 aa12.76□□□□□ -0.37
CDH8-201ENST00000299345 PBX4Q9BYU1 374 aa12.76□□□□□ -0.37
CDH8-201ENST00000299345 PLA2G12AQ9BZM1 189 aa12.76□□□□□ -0.37
CDH8-201ENST00000299345 MAN2C1Q9NTJ4 1040 aa12.76□□□□□ -0.37
CDH8-201ENST00000299345 SEMA4GQ9NTN9 838 aa12.76□□□□□ -0.37
CDH8-201ENST00000299345 IL20RAQ9UHF4 553 aa12.76□□□□□ -0.37
CDH8-201ENST00000299345 SMIM30A4D0T7 59 aa12.75□□□□□ -0.37
CDH8-201ENST00000299345 OR6C74A6NCV1 312 aa12.75□□□□□ -0.37
CDH8-201ENST00000299345 ADRA2AP08913 450 aa12.75□□□□□ -0.37
CDH8-201ENST00000299345 HBQ1P09105 142 aa12.75□□□□□ -0.37
CDH8-201ENST00000299345 PDX1P52945 283 aa12.75□□□□□ -0.37
CDH8-201ENST00000299345 ARFIP1P53367 373 aa12.75□□□□□ -0.37
CDH8-201ENST00000299345 PDZK1Q5T2W1 519 aa12.75□□□□□ -0.37
CDH8-201ENST00000299345 ZNF425Q6IV72 752 aa12.75□□□□□ -0.37
CDH8-201ENST00000299345 FAM131AQ6UXB0 335 aa12.75□□□□□ -0.37
CDH8-201ENST00000299345 CD300LDQ6UXZ3 194 aa12.75□□□□□ -0.37
CDH8-201ENST00000299345 CCL4L1Q8NHW4 92 aa12.75□□□□□ -0.37
CDH8-201ENST00000299345 ACOT11Q8WXI4 607 aaPredicted RBP12.75□□□□□ -0.37
CDH8-201ENST00000299345 TMEM168Q9H0V1 697 aa12.75□□□□□ -0.37
CDH8-201ENST00000299345 GON4LQ3T8J9 2241 aa12.75□□□□□ -0.37
CDH8-201ENST00000299345 LINC01565O15544 149 aa12.75□□□□□ -0.37
CDH8-201ENST00000299345 TMCC2O75069 709 aa12.75□□□□□ -0.37
CDH8-201ENST00000299345 SNX4O95219 450 aa12.75□□□□□ -0.37
CDH8-201ENST00000299345 ATXN8OSP0DMR3 200 aa12.75□□□□□ -0.37
CDH8-201ENST00000299345 BMP7P18075 431 aa12.75□□□□□ -0.37
CDH8-201ENST00000299345 ETV5P41161 510 aa12.75□□□□□ -0.37
CDH8-201ENST00000299345 KIR2DL1P43626 348 aaPredicted RBP12.75□□□□□ -0.37
CDH8-201ENST00000299345 ETV1P50549 477 aa12.75□□□□□ -0.37
CDH8-201ENST00000299345 LBX1P52954 281 aa12.75□□□□□ -0.37
CDH8-201ENST00000299345 FUT5Q11128 374 aa12.75□□□□□ -0.37
CDH8-201ENST00000299345 RAB40BQ12829 278 aa12.75□□□□□ -0.37
CDH8-201ENST00000299345 NFATC4Q14934 902 aa12.75□□□□□ -0.37
CDH8-201ENST00000299345 DESI1Q6ICB0 168 aa12.75□□□□□ -0.37
CDH8-201ENST00000299345 FIGLAQ6QHK4 219 aa12.75□□□□□ -0.37
CDH8-201ENST00000299345 ABHD13Q7L211 337 aa12.75□□□□□ -0.37
CDH8-201ENST00000299345 RANBP3LQ86VV4 465 aaPredicted RBP12.75□□□□□ -0.37
CDH8-201ENST00000299345 CDK20Q8IZL9 346 aa12.75□□□□□ -0.37
CDH8-201ENST00000299345 ZNF655Q8N720 491 aaPredicted RBP12.75□□□□□ -0.37
CDH8-201ENST00000299345 MORN4Q8NDC4 146 aa12.75□□□□□ -0.37
CDH8-201ENST00000299345 TMCO6Q96DC7 493 aa12.75□□□□□ -0.37
CDH8-201ENST00000299345 SLC35A4Q96G79 324 aa12.75□□□□□ -0.37
CDH8-201ENST00000299345 SLC41A3Q96GZ6 507 aa12.75□□□□□ -0.37
CDH8-201ENST00000299345 DIRAS2Q96HU8 199 aa12.75□□□□□ -0.37
CDH8-201ENST00000299345 NXF2Q9GZY0 626 aaKnown RBP12.75□□□□□ -0.37
CDH8-201ENST00000299345 NDOR1Q9UHB4 597 aa12.75□□□□□ -0.37
CDH8-201ENST00000299345 EXOSC1Q9Y3B2 195 aaKnown RBP12.75□□□□□ -0.37
CDH8-201ENST00000299345 A0A075B6Q4 140 aa12.75□□□□□ -0.37
CDH8-201ENST00000299345 ZNF670-ZNF695F2Z2N8 137 aa12.75□□□□□ -0.37
CDH8-201ENST00000299345 K7EQS6 105 aa12.75□□□□□ -0.37
CDH8-201ENST00000299345 KRT8P05787 483 aa12.75□□□□□ -0.37
CDH8-201ENST00000299345 ACP2P11117 423 aa12.75□□□□□ -0.37
CDH8-201ENST00000299345 HNRNPA0Q13151 305 aaKnown RBP12.75□□□□□ -0.37
CDH8-201ENST00000299345 KIR2DS3Q14952 304 aa12.75□□□□□ -0.37
CDH8-201ENST00000299345 EIPR1Q53HC9 387 aa12.75□□□□□ -0.37
CDH8-201ENST00000299345 MFSD12Q6NUT3 480 aa12.75□□□□□ -0.37
CDH8-201ENST00000299345 PAQR7Q86WK9 346 aa12.75□□□□□ -0.37
CDH8-201ENST00000299345 OOSP2Q86WS3 158 aa12.75□□□□□ -0.37
CDH8-201ENST00000299345 COX18Q8N8Q8 333 aa12.75□□□□□ -0.37
CDH8-201ENST00000299345 OR52L1Q8NGH7 329 aa12.75□□□□□ -0.37
CDH8-201ENST00000299345 QPCTLQ9NXS2 382 aa12.75□□□□□ -0.37
CDH8-201ENST00000299345 NLGN3Q9NZ94 848 aa12.75□□□□□ -0.37
CDH8-201ENST00000299345 CES1P1Q9UKY3 287 aa12.75□□□□□ -0.37
CDH8-201ENST00000299345 GPR55Q9Y2T6 319 aaPredicted RBP12.75□□□□□ -0.37
CDH8-201ENST00000299345 YBX2Q9Y2T7 364 aaKnown RBP12.75□□□□□ -0.37
CDH8-201ENST00000299345 PTPRSQ13332 1948 aa12.75□□□□□ -0.37
CDH8-201ENST00000299345 CASKO14936 926 aa12.74□□□□□ -0.37
CDH8-201ENST00000299345 PRICKLE3O43900 615 aaPredicted RBP12.74□□□□□ -0.37
CDH8-201ENST00000299345 CDK5Q00535 292 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms