RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 TMEM64Q6YI46 380 aa11.15□□□□□ -0.63
HMGB2-201ENST00000296503 FBXW8Q8N3Y1 598 aa11.15□□□□□ -0.63
HMGB2-201ENST00000296503 OR5M3Q8NGP4 307 aa11.15□□□□□ -0.63
HMGB2-201ENST00000296503 FBXO27Q8NI29 283 aa11.15□□□□□ -0.63
HMGB2-201ENST00000296503 FNDC8Q8TC99 324 aa11.15□□□□□ -0.63
HMGB2-201ENST00000296503 ZNF675Q8TD23 568 aa11.15□□□□□ -0.63
HMGB2-201ENST00000296503 ADIPOR1Q96A54 375 aa11.15□□□□□ -0.63
HMGB2-201ENST00000296503 PPCDCQ96CD2 204 aa11.15□□□□□ -0.63
HMGB2-201ENST00000296503 SLX1AQ9BQ83 275 aa11.15□□□□□ -0.63
HMGB2-201ENST00000296503 SACM1LQ9NTJ5 587 aa11.15□□□□□ -0.63
HMGB2-201ENST00000296503 SEC14L3Q9UDX4 400 aa11.15□□□□□ -0.63
HMGB2-201ENST00000296503 DTNAQ9Y4J8 743 aa11.15□□□□□ -0.63
HMGB2-201ENST00000296503 NPFFR2Q9Y5X5 522 aa11.15□□□□□ -0.63
HMGB2-201ENST00000296503 BAHCC1Q9P281 2608 aa11.14□□□□□ -0.63
HMGB2-201ENST00000296503 ASPDHA6ND91 283 aa11.14□□□□□ -0.63
HMGB2-201ENST00000296503 NPIPA5E9PKD4 350 aa11.14□□□□□ -0.63
HMGB2-201ENST00000296503 G3V3Y1 287 aa11.14□□□□□ -0.63
HMGB2-201ENST00000296503 DNAJA2O60884 412 aa11.14□□□□□ -0.63
HMGB2-201ENST00000296503 PRPS2P11908 318 aa11.14□□□□□ -0.63
HMGB2-201ENST00000296503 ETS2P15036 469 aa11.14□□□□□ -0.63
HMGB2-201ENST00000296503 CNR1P21554 472 aa11.14□□□□□ -0.63
HMGB2-201ENST00000296503 GPX3P22352 226 aa11.14□□□□□ -0.63
HMGB2-201ENST00000296503 RFC3P40938 356 aa11.14□□□□□ -0.63
HMGB2-201ENST00000296503 AQP5P55064 265 aa11.14□□□□□ -0.63
HMGB2-201ENST00000296503 ZNF791Q3KP31 576 aaPredicted RBP11.14□□□□□ -0.63
HMGB2-201ENST00000296503 C1QTNF12Q5T7M4 302 aa11.14□□□□□ -0.63
HMGB2-201ENST00000296503 FHL5Q5TD97 284 aa11.14□□□□□ -0.63
HMGB2-201ENST00000296503 GFRALQ6UXV0 394 aa11.14□□□□□ -0.63
HMGB2-201ENST00000296503 Q6ZNX1 250 aa11.14□□□□□ -0.63
HMGB2-201ENST00000296503 R3HCC1LQ7Z5L2 792 aaKnown RBP11.14□□□□□ -0.63
HMGB2-201ENST00000296503 DND1Q8IYX4 353 aaKnown RBP11.14□□□□□ -0.63
HMGB2-201ENST00000296503 PQLC1Q8N2U9 271 aa11.14□□□□□ -0.63
HMGB2-201ENST00000296503 GOLM1Q8NBJ4 401 aa11.14□□□□□ -0.63
HMGB2-201ENST00000296503 NMD3Q96D46 503 aaKnown RBP11.14□□□□□ -0.63
HMGB2-201ENST00000296503 SPACA9Q96E40 222 aaPredicted RBP11.14□□□□□ -0.63
HMGB2-201ENST00000296503 MAGED4Q96JG8 741 aa11.14□□□□□ -0.63
HMGB2-201ENST00000296503 FRMD6Q96NE9 622 aa11.14□□□□□ -0.63
HMGB2-201ENST00000296503 ITPAQ9BY32 194 aa11.14□□□□□ -0.63
HMGB2-201ENST00000296503 NUF2Q9BZD4 464 aa11.14□□□□□ -0.63
HMGB2-201ENST00000296503 NXF5Q9H1B4 397 aaKnown RBP11.14□□□□□ -0.63
HMGB2-201ENST00000296503 TSPAN10Q9H1Z9 355 aaPredicted RBP11.14□□□□□ -0.63
HMGB2-201ENST00000296503 GLIPR2Q9H4G4 154 aa11.14□□□□□ -0.63
HMGB2-201ENST00000296503 AKTIPQ9H8T0 292 aa11.14□□□□□ -0.63
HMGB2-201ENST00000296503 PAIP2BQ9ULR5 123 aaKnown RBP11.14□□□□□ -0.63
HMGB2-201ENST00000296503 NPIPA1Q9UND3 350 aa11.14□□□□□ -0.63
HMGB2-201ENST00000296503 POMPQ9Y244 141 aa11.14□□□□□ -0.63
HMGB2-201ENST00000296503 DTX4Q9Y2E6 619 aa11.14□□□□□ -0.63
HMGB2-201ENST00000296503 SLC22A2O15244 555 aa11.13□□□□□ -0.63
HMGB2-201ENST00000296503 PDPK1O15530 556 aa11.13□□□□□ -0.63
HMGB2-201ENST00000296503 TRMUO75648 421 aaKnown RBP11.13□□□□□ -0.63
HMGB2-201ENST00000296503 KITP10721 976 aa11.13□□□□□ -0.63
HMGB2-201ENST00000296503 ZNF24P17028 368 aa11.13□□□□□ -0.63
HMGB2-201ENST00000296503 DDX5P17844 614 aaKnown RBP11.13□□□□□ -0.63
HMGB2-201ENST00000296503 GPC1P35052 558 aa11.13□□□□□ -0.63
HMGB2-201ENST00000296503 SOX18P35713 384 aa11.13□□□□□ -0.63
HMGB2-201ENST00000296503 CPA2P48052 419 aa11.13□□□□□ -0.63
HMGB2-201ENST00000296503 EMDP50402 254 aa11.13□□□□□ -0.63
HMGB2-201ENST00000296503 MANFP55145 182 aaKnown RBP11.13□□□□□ -0.63
HMGB2-201ENST00000296503 DCAF7P61962 342 aa11.13□□□□□ -0.63
HMGB2-201ENST00000296503 PLGLB1Q02325 96 aa11.13□□□□□ -0.63
HMGB2-201ENST00000296503 EMX2Q04743 252 aa11.13□□□□□ -0.63
HMGB2-201ENST00000296503 DUSP8Q13202 625 aa11.13□□□□□ -0.63
HMGB2-201ENST00000296503 NNATQ16517 81 aa11.13□□□□□ -0.63
HMGB2-201ENST00000296503 LYPD8Q6UX82 237 aa11.13□□□□□ -0.63
HMGB2-201ENST00000296503 PRR22Q8IZ63 422 aa11.13□□□□□ -0.63
HMGB2-201ENST00000296503 ZNF441Q8N8Z8 693 aa11.13□□□□□ -0.63
HMGB2-201ENST00000296503 POGLUT1Q8NBL1 392 aa11.13□□□□□ -0.63
HMGB2-201ENST00000296503 OR7G2Q8NG99 324 aa11.13□□□□□ -0.63
HMGB2-201ENST00000296503 ZFP28Q8NHY6 868 aa11.13□□□□□ -0.63
HMGB2-201ENST00000296503 PIWIL2Q8TC59 973 aaKnown RBP11.13□□□□□ -0.63
HMGB2-201ENST00000296503 ITPKCQ96DU7 683 aa11.13□□□□□ -0.63
HMGB2-201ENST00000296503 MTERF3Q96E29 417 aa11.13□□□□□ -0.63
HMGB2-201ENST00000296503 LCORQ96JN0 433 aaPredicted RBP11.13□□□□□ -0.63
HMGB2-201ENST00000296503 CLPTM1LQ96KA5 538 aa11.13□□□□□ -0.63
HMGB2-201ENST00000296503 AMDHD1Q96NU7 426 aa11.13□□□□□ -0.63
HMGB2-201ENST00000296503 RYDENQ9NUL5 291 aaKnown RBP11.13□□□□□ -0.63
HMGB2-201ENST00000296503 TAS2R9Q9NYW1 312 aa11.13□□□□□ -0.63
HMGB2-201ENST00000296503 ZGRF1Q86YA3 2104 aa11.13□□□□□ -0.63
HMGB2-201ENST00000296503 SH3PXD2BA1X283 911 aa11.12□□□□□ -0.63
HMGB2-201ENST00000296503 TP53I11O14683 189 aa11.12□□□□□ -0.63
HMGB2-201ENST00000296503 PLOD3O60568 738 aa11.12□□□□□ -0.63
HMGB2-201ENST00000296503 ATP6V1G1O75348 118 aa11.12□□□□□ -0.63
HMGB2-201ENST00000296503 NME6O75414 186 aaPredicted RBP11.12□□□□□ -0.63
HMGB2-201ENST00000296503 WISP2O76076 250 aa11.12□□□□□ -0.63
HMGB2-201ENST00000296503 FBXO45P0C2W1 286 aa11.12□□□□□ -0.63
HMGB2-201ENST00000296503 CCL3P10147 92 aa11.12□□□□□ -0.63
HMGB2-201ENST00000296503 PEX2P28328 305 aa11.12□□□□□ -0.63
HMGB2-201ENST00000296503 HPCAL1P37235 193 aa11.12□□□□□ -0.63
HMGB2-201ENST00000296503 RPL3P39023 403 aaKnown RBP11.12□□□□□ -0.63
HMGB2-201ENST00000296503 PPICP45877 212 aa11.12□□□□□ -0.63
HMGB2-201ENST00000296503 TMED10P49755 219 aaKnown RBP11.12□□□□□ -0.63
HMGB2-201ENST00000296503 CDK9P50750 372 aaKnown RBP11.12□□□□□ -0.63
HMGB2-201ENST00000296503 TDGF1P3P51864 188 aa11.12□□□□□ -0.63
HMGB2-201ENST00000296503 KCNK10P57789 538 aa11.12□□□□□ -0.63
HMGB2-201ENST00000296503 TUBA4AP68366 448 aa11.12□□□□□ -0.63
HMGB2-201ENST00000296503 PTGR1Q14914 329 aa11.12□□□□□ -0.63
HMGB2-201ENST00000296503 TRIP10Q15642 601 aa11.12□□□□□ -0.63
HMGB2-201ENST00000296503 KRTCAP3Q53RY4 240 aa11.12□□□□□ -0.63
HMGB2-201ENST00000296503 ZNF385BQ569K4 471 aa11.12□□□□□ -0.63
HMGB2-201ENST00000296503 TMEM107Q6UX40 140 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms