RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 ZNF155Q12901 538 aaPredicted RBP22.9■■□□□ 1.26
U2AF1-201ENST00000291552 EFR3AQ14156 821 aa22.9■■□□□ 1.26
U2AF1-201ENST00000291552 RCAN2Q14206 197 aa22.9■■□□□ 1.26
U2AF1-201ENST00000291552 SPDYAQ5MJ70 313 aa22.9■■□□□ 1.26
U2AF1-201ENST00000291552 OR5M10Q6IEU7 315 aa22.9■■□□□ 1.26
U2AF1-201ENST00000291552 FAM222BQ8WU58 562 aa22.9■■□□□ 1.26
U2AF1-201ENST00000291552 BBS4Q96RK4 519 aa22.9■■□□□ 1.26
U2AF1-201ENST00000291552 SHCBP1LQ9BZQ2 653 aa22.9■■□□□ 1.26
U2AF1-201ENST00000291552 MYNNQ9NPC7 610 aa22.9■■□□□ 1.26
U2AF1-201ENST00000291552 TAS2R10Q9NYW0 307 aa22.9■■□□□ 1.26
U2AF1-201ENST00000291552 CLCF1Q9UBD9 225 aa22.9■■□□□ 1.26
U2AF1-201ENST00000291552 VPS13CQ709C8 3753 aa22.9■■□□□ 1.26
U2AF1-201ENST00000291552 A6NNC1 897 aa22.89■■□□□ 1.25
U2AF1-201ENST00000291552 H0Y3Z8 333 aa22.89■■□□□ 1.25
U2AF1-201ENST00000291552 PSMG1O95456 288 aa22.89■■□□□ 1.25
U2AF1-201ENST00000291552 JUNP05412 331 aaKnown RBP22.89■■□□□ 1.25
U2AF1-201ENST00000291552 CD1EP15812 388 aa22.89■■□□□ 1.25
U2AF1-201ENST00000291552 TACR1P25103 407 aa22.89■■□□□ 1.25
U2AF1-201ENST00000291552 IL12BP29460 328 aa22.89■■□□□ 1.25
U2AF1-201ENST00000291552 PEX19P40855 299 aa22.89■■□□□ 1.25
U2AF1-201ENST00000291552 PNLIPRP2P54317 469 aa22.89■■□□□ 1.25
U2AF1-201ENST00000291552 SRYQ05066 204 aa22.89■■□□□ 1.25
U2AF1-201ENST00000291552 TRIM46Q7Z4K8 759 aa22.89■■□□□ 1.25
U2AF1-201ENST00000291552 IFNEQ86WN2 208 aa22.89■■□□□ 1.25
U2AF1-201ENST00000291552 CCDC126Q96EE4 140 aa22.89■■□□□ 1.25
U2AF1-201ENST00000291552 STMN4Q9H169 189 aaPredicted RBP22.89■■□□□ 1.25
U2AF1-201ENST00000291552 CLEC4MQ9H2X3 399 aaPredicted RBP22.89■■□□□ 1.25
U2AF1-201ENST00000291552 FLRT3Q9NZU0 649 aa22.89■■□□□ 1.25
U2AF1-201ENST00000291552 SENP1Q9P0U3 644 aa22.89■■□□□ 1.25
U2AF1-201ENST00000291552 FOXD3Q9UJU5 478 aaPredicted RBP22.89■■□□□ 1.25
U2AF1-201ENST00000291552 CCL27Q9Y4X3 112 aa22.89■■□□□ 1.25
U2AF1-201ENST00000291552 A0A087WV62 115 aa22.88■■□□□ 1.25
U2AF1-201ENST00000291552 CLCA1A8K7I4 914 aa22.88■■□□□ 1.25
U2AF1-201ENST00000291552 EEF1E1-BLOC1S5C9J1V9 151 aa22.88■■□□□ 1.25
U2AF1-201ENST00000291552 EEF1E1O43324 174 aaKnown RBP22.88■■□□□ 1.25
U2AF1-201ENST00000291552 ZIC3O60481 467 aa22.88■■□□□ 1.25
U2AF1-201ENST00000291552 IL18BPO95998 194 aa22.88■■□□□ 1.25
U2AF1-201ENST00000291552 TMIGD3P0DMS9 266 aaPredicted RBP22.88■■□□□ 1.25
U2AF1-201ENST00000291552 MPIP34949 423 aa22.88■■□□□ 1.25
U2AF1-201ENST00000291552 GCKP35557 465 aa22.88■■□□□ 1.25
U2AF1-201ENST00000291552 NCBP2P52298 156 aaKnown RBP eCLIP22.88■■□□□ 1.25
U2AF1-201ENST00000291552 CLDN18P56856 261 aa22.88■■□□□ 1.25
U2AF1-201ENST00000291552 B3GALT5-AS1P59052 145 aa22.88■■□□□ 1.25
U2AF1-201ENST00000291552 DNAJB13P59910 316 aa22.88■■□□□ 1.25
U2AF1-201ENST00000291552 TMEM107Q6UX40 140 aa22.88■■□□□ 1.25
U2AF1-201ENST00000291552 UCN2Q96RP3 112 aa22.88■■□□□ 1.25
U2AF1-201ENST00000291552 GLIPR2Q9H4G4 154 aa22.88■■□□□ 1.25
U2AF1-201ENST00000291552 TAS2R7Q9NYW3 318 aa22.88■■□□□ 1.25
U2AF1-201ENST00000291552 C19orf53Q9UNZ5 99 aaPredicted RBP22.88■■□□□ 1.25
U2AF1-201ENST00000291552 PTGDR2Q9Y5Y4 395 aa22.88■■□□□ 1.25
U2AF1-201ENST00000291552 RSL1D1O76021 490 aaKnown RBP22.87■■□□□ 1.25
U2AF1-201ENST00000291552 TCEA1P23193 301 aaKnown RBP22.87■■□□□ 1.25
U2AF1-201ENST00000291552 OPRM1P35372 400 aa22.87■■□□□ 1.25
U2AF1-201ENST00000291552 KRT20P35900 424 aa22.87■■□□□ 1.25
U2AF1-201ENST00000291552 PSPHP78330 225 aa22.87■■□□□ 1.25
U2AF1-201ENST00000291552 IMPG1Q17R60 797 aa22.87■■□□□ 1.25
U2AF1-201ENST00000291552 ENPP6Q6UWR7 440 aa22.87■■□□□ 1.25
U2AF1-201ENST00000291552 CDC20BQ86Y33 519 aa22.87■■□□□ 1.25
U2AF1-201ENST00000291552 LRRC46Q96FV0 321 aa22.87■■□□□ 1.25
U2AF1-201ENST00000291552 AMDHD1Q96NU7 426 aa22.87■■□□□ 1.25
U2AF1-201ENST00000291552 RTN4RQ9BZR6 473 aa22.87■■□□□ 1.25
U2AF1-201ENST00000291552 CCM2LQ9NUG4 571 aaPredicted RBP22.87■■□□□ 1.25
U2AF1-201ENST00000291552 TAS2R9Q9NYW1 312 aa22.87■■□□□ 1.25
U2AF1-201ENST00000291552 ST6GALNAC2Q9UJ37 374 aa22.87■■□□□ 1.25
U2AF1-201ENST00000291552 DKKL1Q9UK85 242 aa22.87■■□□□ 1.25
U2AF1-201ENST00000291552 MRPS18CQ9Y3D5 142 aaKnown RBP22.87■■□□□ 1.25
U2AF1-201ENST00000291552 FLNAP21333 2647 aaKnown RBP22.87■■□□□ 1.25
U2AF1-201ENST00000291552 UPK1AO00322 258 aa22.86■■□□□ 1.25
U2AF1-201ENST00000291552 PLOD2O00469 737 aa22.86■■□□□ 1.25
U2AF1-201ENST00000291552 SCO2O43819 266 aa22.86■■□□□ 1.25
U2AF1-201ENST00000291552 FADS1O60427 444 aa22.86■■□□□ 1.25
U2AF1-201ENST00000291552 COQ9O75208 318 aa22.86■■□□□ 1.25
U2AF1-201ENST00000291552 ZNF708P17019 499 aa22.86■■□□□ 1.25
U2AF1-201ENST00000291552 EVI2BP34910 448 aa22.86■■□□□ 1.25
U2AF1-201ENST00000291552 DGKQP52824 942 aa22.86■■□□□ 1.25
U2AF1-201ENST00000291552 DAZAP2Q15038 168 aaPredicted RBP22.86■■□□□ 1.25
U2AF1-201ENST00000291552 NOXRED1Q6NXP6 359 aa22.86■■□□□ 1.25
U2AF1-201ENST00000291552 OR2L13Q8N349 312 aa22.86■■□□□ 1.25
U2AF1-201ENST00000291552 FADS6Q8N9I5 356 aa22.86■■□□□ 1.25
U2AF1-201ENST00000291552 FAM76AQ8TAV0 307 aa22.86■■□□□ 1.25
U2AF1-201ENST00000291552 LINC01560Q8TB33 94 aa22.86■■□□□ 1.25
U2AF1-201ENST00000291552 EPS8L3Q8TE67 593 aaKnown RBP22.86■■□□□ 1.25
U2AF1-201ENST00000291552 EGLN2Q96KS0 407 aa22.86■■□□□ 1.25
U2AF1-201ENST00000291552 SFXN2Q96NB2 322 aa22.86■■□□□ 1.25
U2AF1-201ENST00000291552 CXXC4Q9H2H0 198 aa22.86■■□□□ 1.25
U2AF1-201ENST00000291552 MIEF1Q9NQG6 463 aa22.86■■□□□ 1.25
U2AF1-201ENST00000291552 OXSMQ9NWU1 459 aa22.86■■□□□ 1.25
U2AF1-201ENST00000291552 OR10H1Q9Y4A9 318 aa22.86■■□□□ 1.25
U2AF1-201ENST00000291552 SMIM23A6NLE4 172 aa22.85■■□□□ 1.25
U2AF1-201ENST00000291552 RCBTB2O95199 551 aa22.85■■□□□ 1.25
U2AF1-201ENST00000291552 DPP4P27487 766 aa22.85■■□□□ 1.25
U2AF1-201ENST00000291552 CRHR1P34998 444 aa22.85■■□□□ 1.25
U2AF1-201ENST00000291552 NAA20P61599 178 aa22.85■■□□□ 1.25
U2AF1-201ENST00000291552 SORDQ00796 357 aa22.85■■□□□ 1.25
U2AF1-201ENST00000291552 KIAA0040Q15053 153 aa22.85■■□□□ 1.25
U2AF1-201ENST00000291552 CCDC153Q494R4 210 aa22.85■■□□□ 1.25
U2AF1-201ENST00000291552 SH2D4BQ5SQS7 431 aa22.85■■□□□ 1.25
U2AF1-201ENST00000291552 CLEC6AQ6EIG7 209 aa22.85■■□□□ 1.25
U2AF1-201ENST00000291552 TDRPQ86YL5 185 aa22.85■■□□□ 1.25
U2AF1-201ENST00000291552 GCNT2Q8N0V5 402 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms