RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 NLE1Q9NVX2 485 aaPredicted RBP10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 B4GALT6Q9UBX8 382 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 LSM5Q9Y4Y9 91 aaKnown RBP10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 A6NLC8 198 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 GMDSO60547 372 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 TNFP01375 233 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 CAPNS1P04632 268 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 BMP1P13497 986 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 PRSS3P35030 304 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 GPR4P46093 362 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 MGAT3Q09327 533 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 POU4F3Q15319 338 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 UNC50Q53HI1 259 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 COQ5Q5HYK3 327 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 HES5Q5TA89 166 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 SHFQ7M4L6 423 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 LSMEM2Q8N112 164 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 OR13C3Q8NGS6 347 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 OR52P1PQ8NH57 321 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 HOXB13Q92826 284 aaPredicted RBP10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 FKBP10Q96AY3 582 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 SGTBQ96EQ0 304 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 CREBZFQ9NS37 354 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 YIPF1Q9Y548 306 aa10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 DNMT3AQ9Y6K1 912 aaPredicted RBP10.22□□□□□ -0.77
PKNOX1-201ENST00000291547 A8MVJ9 347 aa10.21□□□□□ -0.77
PKNOX1-201ENST00000291547 KNG1P01042 644 aa10.21□□□□□ -0.77
PKNOX1-201ENST00000291547 KLK3P07288 261 aaPredicted RBP10.21□□□□□ -0.77
PKNOX1-201ENST00000291547 ASGR2P07307 311 aa10.21□□□□□ -0.77
PKNOX1-201ENST00000291547 TYRP1P17643 537 aa10.21□□□□□ -0.77
PKNOX1-201ENST00000291547 CNR2P34972 360 aa10.21□□□□□ -0.77
PKNOX1-201ENST00000291547 GGT2P36268 569 aa10.21□□□□□ -0.77
PKNOX1-201ENST00000291547 DLSTP36957 453 aa10.21□□□□□ -0.77
PKNOX1-201ENST00000291547 PBX2P40425 430 aa10.21□□□□□ -0.77
PKNOX1-201ENST00000291547 FASLGP48023 281 aa10.21□□□□□ -0.77
PKNOX1-201ENST00000291547 ZNF84P51523 738 aa10.21□□□□□ -0.77
PKNOX1-201ENST00000291547 RPS26P62854 115 aaKnown RBP10.21□□□□□ -0.77
PKNOX1-201ENST00000291547 RBM39Q14498 530 aaKnown RBP10.21□□□□□ -0.77
PKNOX1-201ENST00000291547 ARHGAP11AQ6P4F7 1023 aa10.21□□□□□ -0.77
PKNOX1-201ENST00000291547 C6orf120Q7Z4R8 191 aa10.21□□□□□ -0.77
PKNOX1-201ENST00000291547 TRMT10AQ8TBZ6 339 aaKnown RBP10.21□□□□□ -0.77
PKNOX1-201ENST00000291547 PRR11Q96HE9 360 aaPredicted RBP10.21□□□□□ -0.77
PKNOX1-201ENST00000291547 SCPEP1Q9HB40 452 aa10.21□□□□□ -0.77
PKNOX1-201ENST00000291547 TDP1Q9NUW8 608 aa10.21□□□□□ -0.77
PKNOX1-201ENST00000291547 PRODH2Q9UF12 536 aa10.21□□□□□ -0.77
PKNOX1-201ENST00000291547 ENPP5Q9UJA9 477 aa10.21□□□□□ -0.77
PKNOX1-201ENST00000291547 SCN9AQ15858 1988 aa10.21□□□□□ -0.77
PKNOX1-201ENST00000291547 PIGBOS1A0A0B4J2F0 54 aa10.21□□□□□ -0.77
PKNOX1-201ENST00000291547 EPOP01588 193 aa10.21□□□□□ -0.77
PKNOX1-201ENST00000291547 CD1DP15813 335 aa10.21□□□□□ -0.77
PKNOX1-201ENST00000291547 GPR143P51810 404 aa10.21□□□□□ -0.77
PKNOX1-201ENST00000291547 RSU1Q15404 277 aa10.21□□□□□ -0.77
PKNOX1-201ENST00000291547 PCGF3Q3KNV8 242 aa10.21□□□□□ -0.77
PKNOX1-201ENST00000291547 LRIT3Q3SXY7 679 aa10.21□□□□□ -0.77
PKNOX1-201ENST00000291547 MPP7Q5T2T1 576 aa10.21□□□□□ -0.77
PKNOX1-201ENST00000291547 TMEM164Q5U3C3 297 aa10.21□□□□□ -0.77
PKNOX1-201ENST00000291547 TPGS2Q68CL5 300 aa10.21□□□□□ -0.77
PKNOX1-201ENST00000291547 TEX19Q8NA77 164 aa10.21□□□□□ -0.77
PKNOX1-201ENST00000291547 LDAHQ9H6V9 325 aa10.21□□□□□ -0.77
PKNOX1-201ENST00000291547 TMEM181Q9P2C4 612 aa10.21□□□□□ -0.77
PKNOX1-201ENST00000291547 ATXN7L1Q9ULK2 861 aaPredicted RBP10.21□□□□□ -0.77
PKNOX1-201ENST00000291547 BACE2Q9Y5Z0 518 aa10.21□□□□□ -0.77
PKNOX1-201ENST00000291547 DCNP07585 359 aaKnown RBP10.21□□□□□ -0.78
PKNOX1-201ENST00000291547 C1GALT1C1LP0DN25 315 aa10.21□□□□□ -0.78
PKNOX1-201ENST00000291547 MAOAP21397 527 aa10.21□□□□□ -0.78
PKNOX1-201ENST00000291547 NNATQ16517 81 aa10.21□□□□□ -0.78
PKNOX1-201ENST00000291547 UGT3A2Q3SY77 523 aa10.21□□□□□ -0.78
PKNOX1-201ENST00000291547 PLEKHS1Q5SXH7 462 aa10.21□□□□□ -0.78
PKNOX1-201ENST00000291547 DCST2Q5T1A1 773 aa10.21□□□□□ -0.78
PKNOX1-201ENST00000291547 CNIH2Q6PI25 160 aa10.21□□□□□ -0.78
PKNOX1-201ENST00000291547 NT5C3BQ969T7 300 aa10.21□□□□□ -0.78
PKNOX1-201ENST00000291547 HS6ST2Q96MM7 605 aa10.21□□□□□ -0.78
PKNOX1-201ENST00000291547 MAGIXQ9H6Y5 334 aa10.21□□□□□ -0.78
PKNOX1-201ENST00000291547 B3GNT2Q9NY97 397 aa10.21□□□□□ -0.78
PKNOX1-201ENST00000291547 RIMS3Q9UJD0 308 aa10.21□□□□□ -0.78
PKNOX1-201ENST00000291547 KIAA1551Q9HCM1 1747 aa10.21□□□□□ -0.78
PKNOX1-201ENST00000291547 EMC8O43402 210 aa10.21□□□□□ -0.78
PKNOX1-201ENST00000291547 SCO2O43819 266 aa10.21□□□□□ -0.78
PKNOX1-201ENST00000291547 BMP2P12643 396 aa10.21□□□□□ -0.78
PKNOX1-201ENST00000291547 NFATC4Q14934 902 aa10.21□□□□□ -0.78
PKNOX1-201ENST00000291547 CST9Q5W186 159 aa10.21□□□□□ -0.78
PKNOX1-201ENST00000291547 LCN8Q6JVE9 175 aa10.21□□□□□ -0.78
PKNOX1-201ENST00000291547 PLBD1Q6P4A8 553 aa10.21□□□□□ -0.78
PKNOX1-201ENST00000291547 HACD2Q6Y1H2 254 aa10.21□□□□□ -0.78
PKNOX1-201ENST00000291547 DPY19L4Q7Z388 723 aa10.21□□□□□ -0.78
PKNOX1-201ENST00000291547 SLC5A8Q8N695 610 aa10.21□□□□□ -0.78
PKNOX1-201ENST00000291547 OR4K5Q8NGD3 323 aa10.21□□□□□ -0.78
PKNOX1-201ENST00000291547 OR52E2Q8NGJ4 325 aa10.21□□□□□ -0.78
PKNOX1-201ENST00000291547 NPY6RQ99463 290 aa10.21□□□□□ -0.78
PKNOX1-201ENST00000291547 TCEAL7Q9BRU2 100 aa10.21□□□□□ -0.78
PKNOX1-201ENST00000291547 HOXD1Q9GZZ0 328 aa10.21□□□□□ -0.78
PKNOX1-201ENST00000291547 IL21RQ9HBE5 538 aa10.21□□□□□ -0.78
PKNOX1-201ENST00000291547 B3GALT1Q9Y5Z6 326 aa10.21□□□□□ -0.78
PKNOX1-201ENST00000291547 LRRC37AA6NMS7 1700 aa10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 HHLA1C9JL84 531 aa10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 NPIPA2E9PIF3 369 aa10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 NPIPA3F8WFD2 350 aa10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 NRP1O14786 923 aa10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 KDELR3O43731 214 aa10.2□□□□□ -0.78
PKNOX1-201ENST00000291547 PRAMEF11O60813 436 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms