RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 CSNK1A1P48729 337 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 CAV2P51636 162 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 GPR50Q13585 617 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 MPEG1Q2M385 716 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 CYP27C1Q4G0S4 372 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 TRIM74Q86UV6 250 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 ELMOD2Q8IZ81 293 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 VWA5B2Q8N398 1253 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 METTL27Q8N6F8 245 aaPredicted RBP3.86□□□□□ -1.79
SCN3A-201ENST00000283254 ASCC1Q8N9N2 400 aaKnown RBP3.86□□□□□ -1.79
SCN3A-201ENST00000283254 POGLUT1Q8NBL1 392 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 FNDC9Q8TBE3 224 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 C10orf82Q8WW14 230 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 ESAMQ96AP7 390 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 BIRC7Q96CA5 298 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 SCRN2Q96FV2 425 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 BOD1Q96IK1 185 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 TMEM43Q9BTV4 400 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 RNF39Q9H2S5 420 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 MTG2Q9H4K7 406 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 GPN2Q9H9Y4 310 aaPredicted RBP3.86□□□□□ -1.79
SCN3A-201ENST00000283254 SAGE1Q9NXZ1 904 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 NKX6-3A6NJ46 265 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 CD300LBA8K4G0 201 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 NPIPA7E9PJI5 369 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 NFKBIEO00221 500 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 MAFKO60675 156 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 RDH16O75452 317 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 VNN1O95497 513 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 CH25HO95992 272 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 NPIPA8P0DM63 369 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 ETS2P15036 469 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 ZNF14P17017 642 aaPredicted RBP3.86□□□□□ -1.79
SCN3A-201ENST00000283254 MSX1P28360 303 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 NAA10P41227 235 aaPredicted RBP3.86□□□□□ -1.79
SCN3A-201ENST00000283254 EMP2P54851 167 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 CRYZQ08257 329 aaKnown RBP3.86□□□□□ -1.79
SCN3A-201ENST00000283254 ATXN7L3Q14CW9 347 aaPredicted RBP3.86□□□□□ -1.79
SCN3A-201ENST00000283254 ISLR2Q6UXK2 745 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 GSG1LQ6UXU4 331 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 SLC46A3Q7Z3Q1 461 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 IRF2BP1Q8IU81 584 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 BEST3Q8N1M1 668 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 SLC7A13Q8TCU3 470 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 ASB17Q8WXJ9 295 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 HLA-CQ95604 372 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 ISG20Q96AZ6 181 aaKnown RBP3.86□□□□□ -1.79
SCN3A-201ENST00000283254 BCL7BQ9BQE9 202 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 UTP23Q9BRU9 249 aaKnown RBP3.86□□□□□ -1.79
SCN3A-201ENST00000283254 TOR3AQ9H497 397 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 ANKMY1Q9P2S6 941 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 STEAP1Q9UHE8 339 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 NSG1A0A0A6YYJ2 146 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 LOC730098B7Z3J9 87 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 PIP5K1CO60331 668 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 ZNF780AO75290 641 aaPredicted RBP3.86□□□□□ -1.79
SCN3A-201ENST00000283254 SNCGO76070 127 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 SOX14O95416 240 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 WNT11O96014 354 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 LCATP04180 440 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 CHRM5P08912 532 aaPredicted RBP3.86□□□□□ -1.79
SCN3A-201ENST00000283254 IQCF3P0C7M6 154 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 CT45A6P0DMU7 189 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 CT45A5P0DMU8 189 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 CT45A7P0DMV0 189 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 CT45A8P0DMV1 189 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 CT45A9P0DMV2 189 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 CAMLGP49069 296 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 PSMA6P60900 246 aaKnown RBP3.86□□□□□ -1.79
SCN3A-201ENST00000283254 PHC1P78364 1004 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 NR0B2Q15466 257 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 ECM1Q16610 540 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 QPCTQ16769 361 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 CT45A2Q5DJT8 189 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 CT45A1Q5HYN5 189 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 SLX4IPQ5VYV7 408 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 STEAP3Q658P3 488 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 MAMDC4Q6UXC1 1216 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 WDR53Q7Z5U6 358 aaPredicted RBP3.86□□□□□ -1.79
SCN3A-201ENST00000283254 FAM109AQ8N4B1 249 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 TCEANCQ8N8B7 351 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 FAM83FQ8NEG4 500 aaPredicted RBP3.86□□□□□ -1.79
SCN3A-201ENST00000283254 OR4K15Q8NH41 348 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 OR1S1Q8NH92 325 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 CT45A3Q8NHU0 189 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 NDNFQ8TB73 568 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 ZNF675Q8TD23 568 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 ADAMTS16Q8TE57 1224 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 MAL2Q969L2 176 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 ZUFSPQ96AP4 578 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 RTP3Q9BQQ7 232 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 GALPQ9UBC7 116 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 SIX4Q9UIU6 781 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 SPG11Q96JI7 2443 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 LOC100130705A0A1B0GUX0 176 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.86□□□□□ -1.79
SCN3A-201ENST00000283254 K7EQM0 130 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 SC5DO75845 299 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 MSL3P1P0C860 447 aa3.86□□□□□ -1.79
SCN3A-201ENST00000283254 PRKACBP22694 351 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms