RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 RUNX1T1Q06455 604 aa23.47■■□□□ 1.35
ROM1-201ENST00000278833 PTCRAQ6ISU1 281 aaPredicted RBP23.47■■□□□ 1.35
ROM1-201ENST00000278833 USP30Q70CQ3 517 aa23.47■■□□□ 1.35
ROM1-201ENST00000278833 PIGXQ8TBF5 258 aa23.47■■□□□ 1.35
ROM1-201ENST00000278833 ACOT11Q8WXI4 607 aaPredicted RBP23.47■■□□□ 1.35
ROM1-201ENST00000278833 RIPOR3Q96MK2 946 aa23.47■■□□□ 1.35
ROM1-201ENST00000278833 NELL2Q99435 816 aa23.47■■□□□ 1.35
ROM1-201ENST00000278833 JAM3Q9BX67 310 aa23.47■■□□□ 1.35
ROM1-201ENST00000278833 SAP130Q9H0E3 1048 aa23.47■■□□□ 1.35
ROM1-201ENST00000278833 KLHL28Q9NXS3 571 aa23.47■■□□□ 1.35
ROM1-201ENST00000278833 SLC13A4Q9UKG4 626 aa23.47■■□□□ 1.35
ROM1-201ENST00000278833 SF3B6Q9Y3B4 125 aaKnown RBP23.47■■□□□ 1.35
ROM1-201ENST00000278833 CHST2Q9Y4C5 530 aa23.47■■□□□ 1.35
ROM1-201ENST00000278833 PCDHGB2Q9Y5G2 931 aa23.47■■□□□ 1.35
ROM1-201ENST00000278833 KCNE3Q9Y6H6 103 aa23.47■■□□□ 1.35
ROM1-201ENST00000278833 SNRNP200O75643 2136 aaKnown RBP23.47■■□□□ 1.35
ROM1-201ENST00000278833 LATO43561 262 aa23.47■■□□□ 1.35
ROM1-201ENST00000278833 OR5F1O95221 314 aa23.47■■□□□ 1.35
ROM1-201ENST00000278833 TPTEP56180 551 aa23.47■■□□□ 1.35
ROM1-201ENST00000278833 PAQR6Q6TCH4 344 aa23.47■■□□□ 1.35
ROM1-201ENST00000278833 TMPRSS11AQ6ZMR5 421 aa23.47■■□□□ 1.35
ROM1-201ENST00000278833 OLIG3Q7RTU3 272 aa23.47■■□□□ 1.35
ROM1-201ENST00000278833 OR8D4Q8NGM9 314 aa23.47■■□□□ 1.35
ROM1-201ENST00000278833 MS4A4EQ96PG1 132 aa23.47■■□□□ 1.35
ROM1-201ENST00000278833 OR2A14Q96R47 310 aa23.47■■□□□ 1.35
ROM1-201ENST00000278833 YIPF4Q9BSR8 244 aa23.47■■□□□ 1.35
ROM1-201ENST00000278833 PLA2G2FQ9BZM2 168 aa23.47■■□□□ 1.35
ROM1-201ENST00000278833 SYNPO2LQ9H987 977 aa23.47■■□□□ 1.35
ROM1-201ENST00000278833 DOCK8Q8NF50 2099 aa23.47■■□□□ 1.35
ROM1-201ENST00000278833 RNGTTO60942 597 aaKnown RBP23.46■■□□□ 1.35
ROM1-201ENST00000278833 ASGR2P07307 311 aa23.46■■□□□ 1.35
ROM1-201ENST00000278833 CHRM5P08912 532 aaPredicted RBP23.46■■□□□ 1.35
ROM1-201ENST00000278833 WASP42768 502 aa23.46■■□□□ 1.35
ROM1-201ENST00000278833 KIR2DL1P43626 348 aaPredicted RBP23.46■■□□□ 1.35
ROM1-201ENST00000278833 CHRNEQ04844 493 aa23.46■■□□□ 1.35
ROM1-201ENST00000278833 ZNF750Q32MQ0 723 aa23.46■■□□□ 1.35
ROM1-201ENST00000278833 ITPRIPL2Q3MIP1 535 aa23.46■■□□□ 1.35
ROM1-201ENST00000278833 CDC73Q6P1J9 531 aa23.46■■□□□ 1.35
ROM1-201ENST00000278833 CD200R1LQ6Q8B3 271 aa23.46■■□□□ 1.35
ROM1-201ENST00000278833 CACUL1Q86Y37 369 aa23.46■■□□□ 1.35
ROM1-201ENST00000278833 POGLUT1Q8NBL1 392 aa23.46■■□□□ 1.35
ROM1-201ENST00000278833 TMEM145Q8NBT3 493 aa23.46■■□□□ 1.35
ROM1-201ENST00000278833 ZNF485Q8NCK3 441 aa23.46■■□□□ 1.35
ROM1-201ENST00000278833 OR9A2Q8NGT5 310 aa23.46■■□□□ 1.35
ROM1-201ENST00000278833 KIAA1143Q96AT1 154 aaPredicted RBP23.46■■□□□ 1.35
ROM1-201ENST00000278833 ERLEC1Q96DZ1 483 aa23.46■■□□□ 1.35
ROM1-201ENST00000278833 OR2M4Q96R27 311 aa23.46■■□□□ 1.35
ROM1-201ENST00000278833 POLMQ9NP87 494 aaPredicted RBP23.46■■□□□ 1.35
ROM1-201ENST00000278833 TBC1D24Q9ULP9 559 aa23.46■■□□□ 1.35
ROM1-201ENST00000278833 CAB39Q9Y376 341 aaPredicted RBP23.46■■□□□ 1.35
ROM1-201ENST00000278833 CMAHPQ9Y471 501 aa23.46■■□□□ 1.35
ROM1-201ENST00000278833 GPSM3Q9Y4H4 160 aa23.46■■□□□ 1.35
ROM1-201ENST00000278833 DYRK3O43781 588 aa23.45■■□□□ 1.35
ROM1-201ENST00000278833 FGF9P31371 208 aaPredicted RBP23.45■■□□□ 1.35
ROM1-201ENST00000278833 CASP3P42574 277 aa23.45■■□□□ 1.35
ROM1-201ENST00000278833 TNFRSF17Q02223 184 aa23.45■■□□□ 1.35
ROM1-201ENST00000278833 FLYWCH1Q4VC44 716 aa23.45■■□□□ 1.35
ROM1-201ENST00000278833 LIPKQ5VXJ0 399 aa23.45■■□□□ 1.35
ROM1-201ENST00000278833 HSDL2Q6YN16 418 aa23.45■■□□□ 1.35
ROM1-201ENST00000278833 QSOX2Q6ZRP7 698 aa23.45■■□□□ 1.35
ROM1-201ENST00000278833 VN1R4Q7Z5H5 301 aa23.45■■□□□ 1.35
ROM1-201ENST00000278833 LAPTM4BQ86VI4 370 aa23.45■■□□□ 1.35
ROM1-201ENST00000278833 FAM20CQ8IXL6 584 aa23.45■■□□□ 1.35
ROM1-201ENST00000278833 OSTF1Q92882 214 aa23.45■■□□□ 1.35
ROM1-201ENST00000278833 RNFT2Q96EX2 444 aa23.45■■□□□ 1.35
ROM1-201ENST00000278833 COQ7Q99807 217 aa23.45■■□□□ 1.35
ROM1-201ENST00000278833 SRRQ9GZT4 340 aa23.45■■□□□ 1.35
ROM1-201ENST00000278833 EGLN3Q9H6Z9 239 aa23.45■■□□□ 1.35
ROM1-201ENST00000278833 SYNDIG1Q9H7V2 258 aa23.45■■□□□ 1.35
ROM1-201ENST00000278833 SACM1LQ9NTJ5 587 aa23.45■■□□□ 1.35
ROM1-201ENST00000278833 SEMA4GQ9NTN9 838 aa23.45■■□□□ 1.35
ROM1-201ENST00000278833 PHF11Q9UIL8 331 aa23.45■■□□□ 1.35
ROM1-201ENST00000278833 PCOLCE2Q9UKZ9 415 aa23.45■■□□□ 1.35
ROM1-201ENST00000278833 SEC14L5O43304 696 aa23.45■■□□□ 1.34
ROM1-201ENST00000278833 IFI6P09912 130 aa23.45■■□□□ 1.34
ROM1-201ENST00000278833 SMIM10L1P0DMW3 83 aa23.45■■□□□ 1.34
ROM1-201ENST00000278833 LSM11P83369 360 aaKnown RBP eCLIP23.45■■□□□ 1.34
ROM1-201ENST00000278833 RGS1Q08116 209 aa23.45■■□□□ 1.34
ROM1-201ENST00000278833 ACSM1Q08AH1 577 aa23.45■■□□□ 1.34
ROM1-201ENST00000278833 SMAD2Q15796 467 aaKnown RBP23.45■■□□□ 1.34
ROM1-201ENST00000278833 FAM214AQ32MH5 1076 aa23.45■■□□□ 1.34
ROM1-201ENST00000278833 MFSD12Q6NUT3 480 aa23.45■■□□□ 1.34
ROM1-201ENST00000278833 AMIGO1Q86WK6 493 aa23.45■■□□□ 1.34
ROM1-201ENST00000278833 ANKK1Q8NFD2 765 aa23.45■■□□□ 1.34
ROM1-201ENST00000278833 IL17RDQ8NFM7 739 aa23.45■■□□□ 1.34
ROM1-201ENST00000278833 ELSPBP1Q96BH3 223 aa23.45■■□□□ 1.34
ROM1-201ENST00000278833 OTUB1Q96FW1 271 aaPredicted RBP23.45■■□□□ 1.34
ROM1-201ENST00000278833 SMIM10Q96HG1 83 aa23.45■■□□□ 1.34
ROM1-201ENST00000278833 GABRG3Q99928 467 aa23.45■■□□□ 1.34
ROM1-201ENST00000278833 IL20Q9NYY1 176 aa23.45■■□□□ 1.34
ROM1-201ENST00000278833 TBC1D3KA0A087X1G2 549 aa23.44■■□□□ 1.34
ROM1-201ENST00000278833 TBC1D3FA6NER0 549 aaPredicted RBP23.44■■□□□ 1.34
ROM1-201ENST00000278833 ALPPL2P10696 532 aa23.44■■□□□ 1.34
ROM1-201ENST00000278833 IL9P15248 144 aa23.44■■□□□ 1.34
ROM1-201ENST00000278833 MTNR1AP48039 350 aa23.44■■□□□ 1.34
ROM1-201ENST00000278833 SLC9A3P48764 834 aa23.44■■□□□ 1.34
ROM1-201ENST00000278833 ADPRHP54922 357 aa23.44■■□□□ 1.34
ROM1-201ENST00000278833 TBC1D3GQ6DHY5 549 aa23.44■■□□□ 1.34
ROM1-201ENST00000278833 ZNF730Q6ZMV8 503 aa23.44■■□□□ 1.34
ROM1-201ENST00000278833 PRICKLE2Q7Z3G6 844 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms