RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 DHRS4L1P0CG22 281 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 ACTC1P68032 377 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 ACTA1P68133 377 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 PPA1Q15181 289 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 DEFB110Q30KQ9 67 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 NDUFAF5Q5TEU4 345 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 LRRC25Q8N386 305 aaPredicted RBP11.44□□□□□ -0.58
SMG6-201ENST00000263073 SYNPRQ8TBG9 265 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 SGTBQ96EQ0 304 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 OR51J1Q9H342 316 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 ZNF442Q9H7R0 627 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 TUBG2Q9NRH3 451 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 ANKMY1Q9P2S6 941 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 CASC3O15234 703 aaKnown RBP11.44□□□□□ -0.58
SMG6-201ENST00000263073 RPS2P15880 293 aaKnown RBP11.44□□□□□ -0.58
SMG6-201ENST00000263073 TDGQ13569 410 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 UGT3A2Q3SY77 523 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 C6orf132Q5T0Z8 1188 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 ZNF767PQ75MW2 155 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 TMEM173Q86WV6 379 aaPredicted RBP11.44□□□□□ -0.58
SMG6-201ENST00000263073 TTC9BQ8N6N2 239 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 CELF2-AS1Q8N7Q2 184 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 SLAMF9Q96A28 289 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 NEDD4LQ96PU5 975 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 GPR62Q9BZJ7 368 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 UBE2J1Q9Y385 318 aaPredicted RBP11.44□□□□□ -0.58
SMG6-201ENST00000263073 SC5DO75845 299 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 GALTP07902 379 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 SLC10A3P09131 477 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 DHPSP49366 369 aaPredicted RBP11.44□□□□□ -0.58
SMG6-201ENST00000263073 WNT4P56705 351 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 GDPD1Q8N9F7 314 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 OR7G2Q8NG99 324 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 BRI3BPQ8WY22 251 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 ZNF597Q96LX8 424 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 LRFN1Q9P244 771 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 FNIP2Q9P278 1114 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 UGT2A1Q9Y4X1 527 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 ASB3Q9Y575 518 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 NFAT5O94916 1531 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 ZNF705FA8MVS1 300 aaPredicted RBP11.44□□□□□ -0.58
SMG6-201ENST00000263073 HEXBP07686 556 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 ZNF705DP0CH99 300 aaPredicted RBP11.44□□□□□ -0.58
SMG6-201ENST00000263073 ZNF705BP0CI00 300 aaPredicted RBP11.44□□□□□ -0.58
SMG6-201ENST00000263073 IL1RNP18510 177 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 NDUFS1P28331 727 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 CTHP32929 405 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 TNFSF8P32971 234 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 FASLGP48023 281 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 RIDAP52758 137 aaKnown RBP11.44□□□□□ -0.58
SMG6-201ENST00000263073 GHRHRQ02643 423 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 FGL1Q08830 312 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 PROX2Q3B8N5 592 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 ALG10BQ5I7T1 473 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 DPY19L4Q7Z388 723 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 ZNF550Q7Z398 422 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 CD163Q86VB7 1156 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 TSTD1Q8NFU3 115 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 C1orf74Q96LT6 269 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 FIZ1Q96SL8 496 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 PITX2Q99697 317 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 SULT4A1Q9BR01 284 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 BRINP1O60477 761 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 HOXB2P14652 356 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 CFL1P23528 166 aaKnown RBP11.44□□□□□ -0.58
SMG6-201ENST00000263073 POLR2IP36954 125 aaKnown RBP11.44□□□□□ -0.58
SMG6-201ENST00000263073 LEXMQ3ZCV2 418 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 SLC35F2Q8IXU6 374 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 METTL4Q8N3J2 472 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 ACBD4Q8NC06 268 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 OR5H6Q8NGV6 325 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 OR14K1Q8NGZ2 314 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 FRZBQ92765 325 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 NT5C3BQ969T7 300 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 NRXN3Q9Y4C0 1643 aa11.44□□□□□ -0.58
SMG6-201ENST00000263073 ANKRD33BA6NCL7 494 aa11.43□□□□□ -0.58
SMG6-201ENST00000263073 IGLON5A6NGN9 336 aa11.43□□□□□ -0.58
SMG6-201ENST00000263073 ZNF705GA8MUZ8 300 aaPredicted RBP11.43□□□□□ -0.58
SMG6-201ENST00000263073 ACTA2P62736 377 aa11.43□□□□□ -0.58
SMG6-201ENST00000263073 ACTG2P63267 376 aa11.43□□□□□ -0.58
SMG6-201ENST00000263073 GPR17Q13304 367 aa11.43□□□□□ -0.58
SMG6-201ENST00000263073 KCTD18Q6PI47 426 aaPredicted RBP11.43□□□□□ -0.58
SMG6-201ENST00000263073 TOR1AIP2Q8NFQ8 470 aa11.43□□□□□ -0.58
SMG6-201ENST00000263073 TSPAN15O95858 294 aa11.43□□□□□ -0.58
SMG6-201ENST00000263073 SLC16A8O95907 504 aa11.43□□□□□ -0.58
SMG6-201ENST00000263073 SNRNP70P08621 437 aaKnown RBP11.43□□□□□ -0.58
SMG6-201ENST00000263073 DPP6P42658 865 aa11.43□□□□□ -0.58
SMG6-201ENST00000263073 HNRNPKP61978 463 aaKnown RBP eCLIP11.43□□□□□ -0.58
SMG6-201ENST00000263073 SHC2P98077 582 aa11.43□□□□□ -0.58
SMG6-201ENST00000263073 NOGQ13253 232 aa11.43□□□□□ -0.58
SMG6-201ENST00000263073 GPR19Q15760 415 aa11.43□□□□□ -0.58
SMG6-201ENST00000263073 ALKAL2Q6UX46 152 aa11.43□□□□□ -0.58
SMG6-201ENST00000263073 ARFGAP1Q8N6T3 406 aa11.43□□□□□ -0.58
SMG6-201ENST00000263073 PEX11GQ96HA9 241 aa11.43□□□□□ -0.58
SMG6-201ENST00000263073 HINT2Q9BX68 163 aa11.43□□□□□ -0.58
SMG6-201ENST00000263073 DDX31Q9H8H2 851 aaKnown RBP11.43□□□□□ -0.58
SMG6-201ENST00000263073 B3GAT2Q9NPZ5 323 aa11.43□□□□□ -0.58
SMG6-201ENST00000263073 GMEB2Q9UKD1 530 aa11.43□□□□□ -0.58
SMG6-201ENST00000263073 ICKQ9UPZ9 632 aa11.43□□□□□ -0.58
SMG6-201ENST00000263073 ZNF142P52746 1687 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms