RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 H0YJX3 145 aa12.34□□□□□ -0.43
SGCA-201ENST00000262018 TXNDC9O14530 226 aa12.34□□□□□ -0.43
SGCA-201ENST00000262018 GUCY1B2O75343 617 aa12.34□□□□□ -0.43
SGCA-201ENST00000262018 C6orf47O95873 294 aa12.34□□□□□ -0.43
SGCA-201ENST00000262018 GPIP06744 558 aa12.34□□□□□ -0.43
SGCA-201ENST00000262018 SLC35G6P0C7Q6 338 aa12.34□□□□□ -0.43
SGCA-201ENST00000262018 SMIM10L1P0DMW3 83 aa12.34□□□□□ -0.43
SGCA-201ENST00000262018 IGFBP2P18065 325 aa12.34□□□□□ -0.43
SGCA-201ENST00000262018 EFNA1P20827 205 aaPredicted RBP12.34□□□□□ -0.43
SGCA-201ENST00000262018 FRKP42685 505 aaPredicted RBP12.34□□□□□ -0.43
SGCA-201ENST00000262018 VSX2P58304 361 aaPredicted RBP12.34□□□□□ -0.43
SGCA-201ENST00000262018 ARF3P61204 181 aaPredicted RBP12.34□□□□□ -0.43
SGCA-201ENST00000262018 DSG2Q14126 1118 aa12.34□□□□□ -0.43
SGCA-201ENST00000262018 GRM7Q14831 915 aa12.34□□□□□ -0.43
SGCA-201ENST00000262018 YOD1Q5VVQ6 348 aaPredicted RBP12.34□□□□□ -0.43
SGCA-201ENST00000262018 COX15Q7KZN9 410 aa12.34□□□□□ -0.43
SGCA-201ENST00000262018 CXXC5Q7LFL8 322 aaKnown RBP12.34□□□□□ -0.43
SGCA-201ENST00000262018 ZNF551Q7Z340 670 aaPredicted RBP12.34□□□□□ -0.43
SGCA-201ENST00000262018 SERPINA11Q86U17 422 aa12.34□□□□□ -0.43
SGCA-201ENST00000262018 ADGRG5Q8IZF4 528 aa12.34□□□□□ -0.43
SGCA-201ENST00000262018 OR4N4Q8N0Y3 316 aa12.34□□□□□ -0.43
SGCA-201ENST00000262018 C10orf111Q8N326 155 aa12.34□□□□□ -0.43
SGCA-201ENST00000262018 CSNK1A1LQ8N752 337 aa12.34□□□□□ -0.43
SGCA-201ENST00000262018 ACOT4Q8N9L9 421 aa12.34□□□□□ -0.43
SGCA-201ENST00000262018 CAMKVQ8NCB2 501 aa12.34□□□□□ -0.43
SGCA-201ENST00000262018 UTP15Q8TED0 518 aaKnown RBP12.34□□□□□ -0.43
SGCA-201ENST00000262018 PHF10Q8WUB8 498 aaKnown RBP12.34□□□□□ -0.43
SGCA-201ENST00000262018 CANT1Q8WVQ1 401 aa12.34□□□□□ -0.43
SGCA-201ENST00000262018 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.34□□□□□ -0.43
SGCA-201ENST00000262018 CIDECQ96AQ7 238 aaPredicted RBP12.34□□□□□ -0.43
SGCA-201ENST00000262018 C8orf44Q96CB5 159 aa12.34□□□□□ -0.43
SGCA-201ENST00000262018 SMIM10Q96HG1 83 aa12.34□□□□□ -0.43
SGCA-201ENST00000262018 REXO5Q96IC2 774 aaKnown RBP12.34□□□□□ -0.43
SGCA-201ENST00000262018 NSMCE2Q96MF7 247 aa12.34□□□□□ -0.43
SGCA-201ENST00000262018 BTBD9Q96Q07 612 aa12.34□□□□□ -0.43
SGCA-201ENST00000262018 CRB3Q9BUF7 120 aa12.34□□□□□ -0.43
SGCA-201ENST00000262018 FAIM2Q9BWQ8 316 aa12.34□□□□□ -0.43
SGCA-201ENST00000262018 SPATA9Q9BWV2 254 aa12.34□□□□□ -0.43
SGCA-201ENST00000262018 ROGDIQ9GZN7 287 aa12.34□□□□□ -0.43
SGCA-201ENST00000262018 Q9H521 79 aa12.34□□□□□ -0.43
SGCA-201ENST00000262018 RPF2Q9H7B2 306 aaKnown RBP12.34□□□□□ -0.43
SGCA-201ENST00000262018 TPT1P8Q9HAU6 139 aa12.34□□□□□ -0.43
SGCA-201ENST00000262018 TEX10Q9NXF1 929 aaPredicted RBP12.34□□□□□ -0.43
SGCA-201ENST00000262018 CTSFQ9UBX1 484 aa12.34□□□□□ -0.43
SGCA-201ENST00000262018 RIMS3Q9UJD0 308 aa12.34□□□□□ -0.43
SGCA-201ENST00000262018 NXT1Q9UKK6 140 aaKnown RBP12.34□□□□□ -0.43
SGCA-201ENST00000262018 CNOT11Q9UKZ1 510 aaKnown RBP12.34□□□□□ -0.43
SGCA-201ENST00000262018 PCDHGB4Q9UN71 923 aa12.34□□□□□ -0.43
SGCA-201ENST00000262018 CORO2BQ9UQ03 480 aa12.34□□□□□ -0.43
SGCA-201ENST00000262018 ASB4Q9Y574 426 aa12.34□□□□□ -0.43
SGCA-201ENST00000262018 NUP214P35658 2090 aaPredicted RBP12.34□□□□□ -0.43
SGCA-201ENST00000262018 INTS1Q8N201 2190 aaKnown RBP12.33□□□□□ -0.44
SGCA-201ENST00000262018 DHRS12A0PJE2 317 aa12.33□□□□□ -0.44
SGCA-201ENST00000262018 FITM1A5D6W6 292 aa12.33□□□□□ -0.44
SGCA-201ENST00000262018 URADA6NGE7 173 aa12.33□□□□□ -0.44
SGCA-201ENST00000262018 GSTA4O15217 222 aa12.33□□□□□ -0.44
SGCA-201ENST00000262018 P2RX6O15547 441 aa12.33□□□□□ -0.44
SGCA-201ENST00000262018 ZNHIT1O43257 154 aa12.33□□□□□ -0.44
SGCA-201ENST00000262018 GMNNO75496 209 aa12.33□□□□□ -0.44
SGCA-201ENST00000262018 EIF2S1P05198 315 aaKnown RBP12.33□□□□□ -0.44
SGCA-201ENST00000262018 ABCB1P08183 1280 aaPredicted RBP12.33□□□□□ -0.44
SGCA-201ENST00000262018 ABOP16442 354 aa12.33□□□□□ -0.44
SGCA-201ENST00000262018 ARSFP54793 590 aa12.33□□□□□ -0.44
SGCA-201ENST00000262018 EMP3P54852 163 aa12.33□□□□□ -0.44
SGCA-201ENST00000262018 HBA1P69905 142 aa12.33□□□□□ -0.44
SGCA-201ENST00000262018 MYBPHQ13203 477 aa12.33□□□□□ -0.44
SGCA-201ENST00000262018 SLAMF1Q13291 335 aa12.33□□□□□ -0.44
SGCA-201ENST00000262018 GAB1Q13480 694 aa12.33□□□□□ -0.44
SGCA-201ENST00000262018 PCOLCEQ15113 449 aa12.33□□□□□ -0.44
SGCA-201ENST00000262018 LILRA2Q8N149 483 aa12.33□□□□□ -0.44
SGCA-201ENST00000262018 TTC29Q8NA56 475 aaPredicted RBP12.33□□□□□ -0.44
SGCA-201ENST00000262018 KCT2Q8NC54 265 aa12.33□□□□□ -0.44
SGCA-201ENST00000262018 PAPD5Q8NDF8 572 aaKnown RBP12.33□□□□□ -0.44
SGCA-201ENST00000262018 THAP3Q8WTV1 239 aaPredicted RBP12.33□□□□□ -0.44
SGCA-201ENST00000262018 OR5P2Q8WZ92 322 aa12.33□□□□□ -0.44
SGCA-201ENST00000262018 GPR137Q96N19 417 aa12.33□□□□□ -0.44
SGCA-201ENST00000262018 PKP2Q99959 881 aa12.33□□□□□ -0.44
SGCA-201ENST00000262018 SLC26A1Q9H2B4 701 aa12.33□□□□□ -0.44
SGCA-201ENST00000262018 COPS7BQ9H9Q2 264 aaPredicted RBP12.33□□□□□ -0.44
SGCA-201ENST00000262018 NPDC1Q9NQX5 325 aaPredicted RBP12.33□□□□□ -0.44
SGCA-201ENST00000262018 LYARQ9NX58 379 aaKnown RBP12.33□□□□□ -0.44
SGCA-201ENST00000262018 DNAJB12Q9NXW2 375 aaKnown RBP12.33□□□□□ -0.44
SGCA-201ENST00000262018 TAS2R9Q9NYW1 312 aa12.33□□□□□ -0.44
SGCA-201ENST00000262018 FN1P02751 2386 aaKnown RBP12.33□□□□□ -0.44
SGCA-201ENST00000262018 COL6A5A8TX70 2615 aa12.32□□□□□ -0.44
SGCA-201ENST00000262018 NSG1A0A0A6YYJ2 146 aa12.32□□□□□ -0.44
SGCA-201ENST00000262018 CXCR6O00574 342 aa12.32□□□□□ -0.44
SGCA-201ENST00000262018 PDPK1O15530 556 aa12.32□□□□□ -0.44
SGCA-201ENST00000262018 C1QCP02747 245 aa12.32□□□□□ -0.44
SGCA-201ENST00000262018 IL10P22301 178 aa12.32□□□□□ -0.44
SGCA-201ENST00000262018 PSMA4P25789 261 aaKnown RBP12.32□□□□□ -0.44
SGCA-201ENST00000262018 CERS1P27544 350 aa12.32□□□□□ -0.44
SGCA-201ENST00000262018 ALDH9A1P49189 494 aa12.32□□□□□ -0.44
SGCA-201ENST00000262018 MEOX1P50221 254 aa12.32□□□□□ -0.44
SGCA-201ENST00000262018 RAB8AP61006 207 aa12.32□□□□□ -0.44
SGCA-201ENST00000262018 ADAM8P78325 824 aa12.32□□□□□ -0.44
SGCA-201ENST00000262018 MLC1Q15049 377 aa12.32□□□□□ -0.44
SGCA-201ENST00000262018 PRTGQ2VWP7 1150 aa12.32□□□□□ -0.44
SGCA-201ENST00000262018 FAM214AQ32MH5 1076 aa12.32□□□□□ -0.44
SGCA-201ENST00000262018 KRTCAP3Q53RY4 240 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms