RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 ULK3Q6PHR2 472 aa12.66□□□□□ -0.38
PRPF38A-201ENST00000257181 TMPRSS12Q86WS5 348 aa12.66□□□□□ -0.38
PRPF38A-201ENST00000257181 ELP5Q8TE02 316 aa12.66□□□□□ -0.38
PRPF38A-201ENST00000257181 SLC37A2Q8TED4 501 aa12.66□□□□□ -0.38
PRPF38A-201ENST00000257181 ZNF480Q8WV37 535 aa12.66□□□□□ -0.38
PRPF38A-201ENST00000257181 SLC22A12Q96S37 553 aa12.66□□□□□ -0.38
PRPF38A-201ENST00000257181 C12orf71A8MTZ7 269 aa12.66□□□□□ -0.38
PRPF38A-201ENST00000257181 KPNA4O00629 521 aaPredicted RBP12.66□□□□□ -0.38
PRPF38A-201ENST00000257181 VAMP5O95183 116 aa12.66□□□□□ -0.38
PRPF38A-201ENST00000257181 IL2RAP01589 272 aa12.66□□□□□ -0.38
PRPF38A-201ENST00000257181 C7P10643 843 aa12.66□□□□□ -0.38
PRPF38A-201ENST00000257181 ARSDP51689 593 aa12.66□□□□□ -0.38
PRPF38A-201ENST00000257181 VMACQ2NL98 169 aa12.66□□□□□ -0.38
PRPF38A-201ENST00000257181 OLFML2AQ68BL7 652 aa12.66□□□□□ -0.38
PRPF38A-201ENST00000257181 CARM1Q86X55 608 aa12.66□□□□□ -0.38
PRPF38A-201ENST00000257181 ZNF321PQ8N8H1 164 aa12.66□□□□□ -0.38
PRPF38A-201ENST00000257181 OR8S1Q8NH09 359 aa12.66□□□□□ -0.38
PRPF38A-201ENST00000257181 OIT3Q8WWZ8 545 aa12.66□□□□□ -0.38
PRPF38A-201ENST00000257181 CORINQ9Y5Q5 1042 aa12.66□□□□□ -0.38
PRPF38A-201ENST00000257181 PCYT1AP49585 367 aa12.66□□□□□ -0.38
PRPF38A-201ENST00000257181 TPTEP56180 551 aa12.66□□□□□ -0.38
PRPF38A-201ENST00000257181 UBQLNLQ8IYU4 475 aa12.66□□□□□ -0.38
PRPF38A-201ENST00000257181 WDR77Q9BQA1 342 aaPredicted RBP12.66□□□□□ -0.38
PRPF38A-201ENST00000257181 BOCQ9BWV1 1114 aa12.66□□□□□ -0.38
PRPF38A-201ENST00000257181 MTMR10Q9NXD2 777 aa12.66□□□□□ -0.38
PRPF38A-201ENST00000257181 ING3Q9NXR8 418 aa12.66□□□□□ -0.38
PRPF38A-201ENST00000257181 ERVK-19Q9WJR5 959 aa12.66□□□□□ -0.38
PRPF38A-201ENST00000257181 RIDAP52758 137 aaKnown RBP12.65□□□□□ -0.38
PRPF38A-201ENST00000257181 ZNF789Q5FWF6 425 aa12.65□□□□□ -0.38
PRPF38A-201ENST00000257181 AGBL4Q5VU57 503 aa12.65□□□□□ -0.38
PRPF38A-201ENST00000257181 ZNF761Q86XN6 746 aaPredicted RBP12.65□□□□□ -0.38
PRPF38A-201ENST00000257181 LMNTD1Q8N9Z9 388 aa12.65□□□□□ -0.38
PRPF38A-201ENST00000257181 THAP3Q8WTV1 239 aaPredicted RBP12.65□□□□□ -0.38
PRPF38A-201ENST00000257181 PDCD10Q9BUL8 212 aa12.65□□□□□ -0.38
PRPF38A-201ENST00000257181 SOX17Q9H6I2 414 aaPredicted RBP12.65□□□□□ -0.38
PRPF38A-201ENST00000257181 MT-ND2P03891 347 aa12.65□□□□□ -0.38
PRPF38A-201ENST00000257181 CCR7P32248 378 aa12.65□□□□□ -0.38
PRPF38A-201ENST00000257181 SCRN3Q0VDG4 424 aa12.65□□□□□ -0.38
PRPF38A-201ENST00000257181 VEZF1Q14119 521 aa12.65□□□□□ -0.38
PRPF38A-201ENST00000257181 ZNF628Q5EBL2 1059 aa12.65□□□□□ -0.38
PRPF38A-201ENST00000257181 TMEM214Q6NUQ4 689 aaKnown RBP12.65□□□□□ -0.38
PRPF38A-201ENST00000257181 LRRN1Q6UXK5 716 aa12.65□□□□□ -0.38
PRPF38A-201ENST00000257181 CCDC103Q8IW40 242 aa12.65□□□□□ -0.38
PRPF38A-201ENST00000257181 HSH2DQ96JZ2 352 aa12.65□□□□□ -0.38
PRPF38A-201ENST00000257181 FKRPQ9H9S5 495 aa12.65□□□□□ -0.38
PRPF38A-201ENST00000257181 ELOVL3Q9HB03 270 aa12.65□□□□□ -0.38
PRPF38A-201ENST00000257181 SLC22A23A1A5C7 686 aa12.65□□□□□ -0.38
PRPF38A-201ENST00000257181 HPRP00739 348 aa12.65□□□□□ -0.38
PRPF38A-201ENST00000257181 OCLNQ16625 522 aa12.65□□□□□ -0.38
PRPF38A-201ENST00000257181 TRIM16LQ309B1 348 aa12.65□□□□□ -0.38
PRPF38A-201ENST00000257181 VWA2Q5GFL6 755 aa12.65□□□□□ -0.38
PRPF38A-201ENST00000257181 DCST2Q5T1A1 773 aa12.65□□□□□ -0.38
PRPF38A-201ENST00000257181 DEFB124Q8NES8 71 aa12.65□□□□□ -0.38
PRPF38A-201ENST00000257181 GTPBP3Q969Y2 492 aaKnown RBP12.65□□□□□ -0.38
PRPF38A-201ENST00000257181 C1GALT1C1Q96EU7 318 aa12.65□□□□□ -0.38
PRPF38A-201ENST00000257181 BORCS8Q96FH0 119 aa12.65□□□□□ -0.38
PRPF38A-201ENST00000257181 URM1Q9BTM9 101 aaKnown RBP12.65□□□□□ -0.38
PRPF38A-201ENST00000257181 CADM1Q9BY67 442 aaKnown RBP12.65□□□□□ -0.38
PRPF38A-201ENST00000257181 NMUR2Q9GZQ4 415 aa12.65□□□□□ -0.38
PRPF38A-201ENST00000257181 CPSF4LA6NMK7 179 aaKnown RBP12.65□□□□□ -0.39
PRPF38A-201ENST00000257181 B4GAT1O43505 415 aa12.65□□□□□ -0.39
PRPF38A-201ENST00000257181 ENTPD6O75354 484 aa12.65□□□□□ -0.39
PRPF38A-201ENST00000257181 ZMPSTE24O75844 475 aa12.65□□□□□ -0.39
PRPF38A-201ENST00000257181 DLGAP3O95886 979 aa12.65□□□□□ -0.39
PRPF38A-201ENST00000257181 GP1BAP07359 652 aa12.65□□□□□ -0.39
PRPF38A-201ENST00000257181 ZNF35P13682 527 aa12.65□□□□□ -0.39
PRPF38A-201ENST00000257181 EDNRAP25101 427 aa12.65□□□□□ -0.39
PRPF38A-201ENST00000257181 CDH15P55291 814 aa12.65□□□□□ -0.39
PRPF38A-201ENST00000257181 MTPNP58546 118 aa12.65□□□□□ -0.39
PRPF38A-201ENST00000257181 RTL6Q6ICC9 239 aa12.65□□□□□ -0.39
PRPF38A-201ENST00000257181 SMARCD3Q6STE5 483 aa12.65□□□□□ -0.39
PRPF38A-201ENST00000257181 CHID1Q9BWS9 393 aa12.65□□□□□ -0.39
PRPF38A-201ENST00000257181 TSSK6Q9BXA6 273 aa12.65□□□□□ -0.39
PRPF38A-201ENST00000257181 C1orf198Q9H425 327 aa12.65□□□□□ -0.39
PRPF38A-201ENST00000257181 DENND2DQ9H6A0 471 aaPredicted RBP12.65□□□□□ -0.39
PRPF38A-201ENST00000257181 FAIMQ9NVQ4 179 aa12.65□□□□□ -0.39
PRPF38A-201ENST00000257181 GFRA3O60609 400 aa12.64□□□□□ -0.39
PRPF38A-201ENST00000257181 OR3A3P47888 321 aa12.64□□□□□ -0.39
PRPF38A-201ENST00000257181 OR3A2P47893 321 aa12.64□□□□□ -0.39
PRPF38A-201ENST00000257181 SRYQ05066 204 aa12.64□□□□□ -0.39
PRPF38A-201ENST00000257181 ECH1Q13011 328 aa12.64□□□□□ -0.39
PRPF38A-201ENST00000257181 IHHQ14623 411 aa12.64□□□□□ -0.39
PRPF38A-201ENST00000257181 FAM217AQ8IXS0 508 aa12.64□□□□□ -0.39
PRPF38A-201ENST00000257181 CHST4Q8NCG5 386 aa12.64□□□□□ -0.39
PRPF38A-201ENST00000257181 STACQ99469 402 aa12.64□□□□□ -0.39
PRPF38A-201ENST00000257181 SYT11Q9BT88 431 aa12.64□□□□□ -0.39
PRPF38A-201ENST00000257181 EGLN1Q9GZT9 426 aa12.64□□□□□ -0.39
PRPF38A-201ENST00000257181 C6orf62Q9GZU0 229 aaPredicted RBP12.64□□□□□ -0.39
PRPF38A-201ENST00000257181 ZDHHC2Q9UIJ5 367 aa12.64□□□□□ -0.39
PRPF38A-201ENST00000257181 PRRT4C9JH25 899 aa12.64□□□□□ -0.39
PRPF38A-201ENST00000257181 ENPP1P22413 925 aa12.64□□□□□ -0.39
PRPF38A-201ENST00000257181 ATP12AP54707 1039 aa12.64□□□□□ -0.39
PRPF38A-201ENST00000257181 KCNJ8Q15842 424 aa12.64□□□□□ -0.39
PRPF38A-201ENST00000257181 SLC36A2Q495M3 483 aa12.64□□□□□ -0.39
PRPF38A-201ENST00000257181 ALG10BQ5I7T1 473 aa12.64□□□□□ -0.39
PRPF38A-201ENST00000257181 BAIAP2L2Q6UXY1 529 aa12.64□□□□□ -0.39
PRPF38A-201ENST00000257181 BAHD1Q8TBE0 780 aaPredicted RBP12.64□□□□□ -0.39
PRPF38A-201ENST00000257181 COQ7Q99807 217 aa12.64□□□□□ -0.39
PRPF38A-201ENST00000257181 WDR83Q9BRX9 315 aaKnown RBP12.64□□□□□ -0.39
PRPF38A-201ENST00000257181 PCDHGA1Q9Y5H4 931 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms