RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 ACTR10Q9NZ32 417 aa14.77□□□□□ -0.05
LRFN1-201ENST00000248668 OSGIN1Q9UJX0 560 aa14.77□□□□□ -0.05
LRFN1-201ENST00000248668 A0A087WUU8 490 aa14.76□□□□□ -0.05
LRFN1-201ENST00000248668 ZSCAN5BA6NJL1 495 aa14.76□□□□□ -0.05
LRFN1-201ENST00000248668 MRPS14O60783 128 aaKnown RBP14.76□□□□□ -0.05
LRFN1-201ENST00000248668 TP53P04637 393 aaPredicted RBP14.76□□□□□ -0.05
LRFN1-201ENST00000248668 GSTM5P46439 218 aa14.76□□□□□ -0.05
LRFN1-201ENST00000248668 MAN2A2P49641 1150 aa14.76□□□□□ -0.05
LRFN1-201ENST00000248668 RPS15AP62244 130 aaKnown RBP14.76□□□□□ -0.05
LRFN1-201ENST00000248668 ZNF91Q05481 1191 aa14.76□□□□□ -0.05
LRFN1-201ENST00000248668 GPR68Q15743 365 aa14.76□□□□□ -0.05
LRFN1-201ENST00000248668 SLX4IPQ5VYV7 408 aa14.76□□□□□ -0.05
LRFN1-201ENST00000248668 KLHL6Q8WZ60 621 aa14.76□□□□□ -0.05
LRFN1-201ENST00000248668 GAL3ST3Q96A11 431 aa14.76□□□□□ -0.05
LRFN1-201ENST00000248668 DACH2Q96NX9 599 aa14.76□□□□□ -0.05
LRFN1-201ENST00000248668 SEMA4GQ9NTN9 838 aa14.76□□□□□ -0.05
LRFN1-201ENST00000248668 SLCO1B1Q9Y6L6 691 aa14.76□□□□□ -0.05
LRFN1-201ENST00000248668 PCP4L1A6NKN8 68 aa14.76□□□□□ -0.05
LRFN1-201ENST00000248668 CCRL2O00421 344 aa14.76□□□□□ -0.05
LRFN1-201ENST00000248668 KCNJ13O60928 360 aa14.76□□□□□ -0.05
LRFN1-201ENST00000248668 KIAA1024LP59773 190 aa14.76□□□□□ -0.05
LRFN1-201ENST00000248668 SNAPC1Q16533 368 aa14.76□□□□□ -0.05
LRFN1-201ENST00000248668 ATAD3BQ5T9A4 648 aa14.76□□□□□ -0.05
LRFN1-201ENST00000248668 TMEM64Q6YI46 380 aa14.76□□□□□ -0.05
LRFN1-201ENST00000248668 FAM3CQ92520 227 aa14.76□□□□□ -0.05
LRFN1-201ENST00000248668 ZNF764Q96H86 408 aaPredicted RBP14.76□□□□□ -0.05
LRFN1-201ENST00000248668 LRR1Q96L50 414 aa14.76□□□□□ -0.05
LRFN1-201ENST00000248668 OR2A5Q96R48 311 aa14.76□□□□□ -0.05
LRFN1-201ENST00000248668 SPATA5L1Q9BVQ7 753 aa14.76□□□□□ -0.05
LRFN1-201ENST00000248668 ABCB10Q9NRK6 738 aa14.76□□□□□ -0.05
LRFN1-201ENST00000248668 EVA1BQ9NVM1 165 aa14.76□□□□□ -0.05
LRFN1-201ENST00000248668 ACAD8Q9UKU7 415 aa14.76□□□□□ -0.05
LRFN1-201ENST00000248668 CHST2Q9Y4C5 530 aa14.76□□□□□ -0.05
LRFN1-201ENST00000248668 A0A1W2PRQ8 180 aa14.76□□□□□ -0.05
LRFN1-201ENST00000248668 ARRDC5A6NEK1 342 aa14.76□□□□□ -0.05
LRFN1-201ENST00000248668 AGRPO00253 132 aa14.76□□□□□ -0.05
LRFN1-201ENST00000248668 ARHGAP33O14559 1287 aa14.76□□□□□ -0.05
LRFN1-201ENST00000248668 CTSBP07858 339 aa14.76□□□□□ -0.05
LRFN1-201ENST00000248668 GABRG2P18507 467 aa14.76□□□□□ -0.05
LRFN1-201ENST00000248668 LTBRP36941 435 aa14.76□□□□□ -0.05
LRFN1-201ENST00000248668 PPM1FP49593 454 aaPredicted RBP14.76□□□□□ -0.05
LRFN1-201ENST00000248668 FCRL6Q6DN72 434 aa14.76□□□□□ -0.05
LRFN1-201ENST00000248668 ZNF730Q6ZMV8 503 aa14.76□□□□□ -0.05
LRFN1-201ENST00000248668 Q6ZS52 159 aa14.76□□□□□ -0.05
LRFN1-201ENST00000248668 PRICKLE2Q7Z3G6 844 aa14.76□□□□□ -0.05
LRFN1-201ENST00000248668 SLC22A16Q86VW1 577 aa14.76□□□□□ -0.05
LRFN1-201ENST00000248668 NKAIN4Q8IVV8 208 aa14.76□□□□□ -0.05
LRFN1-201ENST00000248668 LRRC25Q8N386 305 aaPredicted RBP14.76□□□□□ -0.05
LRFN1-201ENST00000248668 FAM131CQ96AQ9 280 aa14.76□□□□□ -0.05
LRFN1-201ENST00000248668 PRRC1Q96M27 445 aa14.76□□□□□ -0.05
LRFN1-201ENST00000248668 PSD2Q9BQI7 771 aa14.76□□□□□ -0.05
LRFN1-201ENST00000248668 WDR12Q9GZL7 423 aaKnown RBP14.76□□□□□ -0.05
LRFN1-201ENST00000248668 CYP8B1Q9UNU6 501 aa14.76□□□□□ -0.05
LRFN1-201ENST00000248668 FAM170BA6NMN3 283 aa14.75□□□□□ -0.05
LRFN1-201ENST00000248668 DSCR3O14972 297 aa14.75□□□□□ -0.05
LRFN1-201ENST00000248668 LRRTM2O43300 516 aa14.75□□□□□ -0.05
LRFN1-201ENST00000248668 HCRTR1O43613 425 aa14.75□□□□□ -0.05
LRFN1-201ENST00000248668 GPR4P46093 362 aa14.75□□□□□ -0.05
LRFN1-201ENST00000248668 ANXA11P50995 505 aaKnown RBP14.75□□□□□ -0.05
LRFN1-201ENST00000248668 RGS8P57771 180 aaPredicted RBP14.75□□□□□ -0.05
LRFN1-201ENST00000248668 SMIM11AP58511 58 aa14.75□□□□□ -0.05
LRFN1-201ENST00000248668 ZNF404Q494X3 552 aa14.75□□□□□ -0.05
LRFN1-201ENST00000248668 RRM2BQ7LG56 351 aa14.75□□□□□ -0.05
LRFN1-201ENST00000248668 KIF18BQ86Y91 864 aa14.75□□□□□ -0.05
LRFN1-201ENST00000248668 DEFB119Q8N690 84 aa14.75□□□□□ -0.05
LRFN1-201ENST00000248668 FLVCR1-AS1Q8TAF5 88 aa14.75□□□□□ -0.05
LRFN1-201ENST00000248668 VMP1Q96GC9 406 aa14.75□□□□□ -0.05
LRFN1-201ENST00000248668 C10orf90Q96M02 699 aa14.75□□□□□ -0.05
LRFN1-201ENST00000248668 GAS2L1Q99501 681 aaPredicted RBP14.75□□□□□ -0.05
LRFN1-201ENST00000248668 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.75□□□□□ -0.05
LRFN1-201ENST00000248668 A0A0G2JPF8 293 aa14.75□□□□□ -0.05
LRFN1-201ENST00000248668 HNRNPCL2B2RXH8 293 aa14.75□□□□□ -0.05
LRFN1-201ENST00000248668 HNRNPCL3B7ZW38 293 aa14.75□□□□□ -0.05
LRFN1-201ENST00000248668 KIAA0513O60268 411 aa14.75□□□□□ -0.05
LRFN1-201ENST00000248668 CCNYL3P0C7X3 344 aa14.75□□□□□ -0.05
LRFN1-201ENST00000248668 HNRNPCL4P0DMR1 293 aa14.75□□□□□ -0.05
LRFN1-201ENST00000248668 CHRNB1P11230 501 aa14.75□□□□□ -0.05
LRFN1-201ENST00000248668 SEPHS1P49903 392 aa14.75□□□□□ -0.05
LRFN1-201ENST00000248668 ILF3Q12906 894 aaKnown RBP eCLIP14.75□□□□□ -0.05
LRFN1-201ENST00000248668 IRF3Q14653 427 aa14.75□□□□□ -0.05
LRFN1-201ENST00000248668 MORN4Q8NDC4 146 aa14.75□□□□□ -0.05
LRFN1-201ENST00000248668 PSD4Q8NDX1 1056 aa14.75□□□□□ -0.05
LRFN1-201ENST00000248668 TMEM52Q8NDY8 209 aa14.75□□□□□ -0.05
LRFN1-201ENST00000248668 SFXN5Q8TD22 340 aa14.75□□□□□ -0.05
LRFN1-201ENST00000248668 RLN3Q8WXF3 142 aa14.75□□□□□ -0.05
LRFN1-201ENST00000248668 GIMAP5Q96F15 307 aa14.75□□□□□ -0.05
LRFN1-201ENST00000248668 KCNS3Q9BQ31 491 aa14.75□□□□□ -0.05
LRFN1-201ENST00000248668 BCL7BQ9BQE9 202 aa14.75□□□□□ -0.05
LRFN1-201ENST00000248668 FUZQ9BT04 418 aa14.75□□□□□ -0.05
LRFN1-201ENST00000248668 BCL2L10Q9HD36 194 aa14.75□□□□□ -0.05
LRFN1-201ENST00000248668 H0YGG7 62 aa14.74□□□□□ -0.05
LRFN1-201ENST00000248668 MPZL2O60487 215 aa14.74□□□□□ -0.05
LRFN1-201ENST00000248668 PRKACBP22694 351 aa14.74□□□□□ -0.05
LRFN1-201ENST00000248668 ARF3P61204 181 aaPredicted RBP14.74□□□□□ -0.05
LRFN1-201ENST00000248668 TNFRSF17Q02223 184 aa14.74□□□□□ -0.05
LRFN1-201ENST00000248668 RAB30Q15771 203 aa14.74□□□□□ -0.05
LRFN1-201ENST00000248668 SSX1Q16384 188 aa14.74□□□□□ -0.05
LRFN1-201ENST00000248668 ZC3H14Q6PJT7 736 aaKnown RBP14.74□□□□□ -0.05
LRFN1-201ENST00000248668 SLC22A18ASQ8N1D0 253 aa14.74□□□□□ -0.05
LRFN1-201ENST00000248668 CYP4Z2PQ8N1L4 340 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms