RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 ASAH1Q13510 395 aa7.81□□□□□ -1.16
APOB-201ENST00000233242 RNF215Q9Y6U7 377 aa7.81□□□□□ -1.16
APOB-201ENST00000233242 SRPX2O60687 465 aaPredicted RBP7.81□□□□□ -1.16
APOB-201ENST00000233242 UBL3O95164 117 aa7.81□□□□□ -1.16
APOB-201ENST00000233242 CDK3Q00526 305 aa7.81□□□□□ -1.16
APOB-201ENST00000233242 RAB31Q13636 194 aa7.81□□□□□ -1.16
APOB-201ENST00000233242 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.81□□□□□ -1.16
APOB-201ENST00000233242 TRAV18A0A075B6X5 111 aa7.81□□□□□ -1.16
APOB-201ENST00000233242 B4GAT1O43505 415 aa7.81□□□□□ -1.16
APOB-201ENST00000233242 TPPPO94811 219 aa7.81□□□□□ -1.16
APOB-201ENST00000233242 CXCL14O95715 111 aa7.81□□□□□ -1.16
APOB-201ENST00000233242 RPS17P08708 135 aaKnown RBP7.81□□□□□ -1.16
APOB-201ENST00000233242 ARSBP15848 533 aa7.81□□□□□ -1.16
APOB-201ENST00000233242 CTNNB1P35222 781 aa7.81□□□□□ -1.16
APOB-201ENST00000233242 MAGEA3P43357 314 aa7.81□□□□□ -1.16
APOB-201ENST00000233242 OR4D1Q15615 310 aa7.81□□□□□ -1.16
APOB-201ENST00000233242 NIPAL3Q6P499 406 aa7.81□□□□□ -1.16
APOB-201ENST00000233242 C15orf39Q6ZRI6 1047 aa7.81□□□□□ -1.16
APOB-201ENST00000233242 PSMB1P20618 241 aaKnown RBP7.81□□□□□ -1.16
APOB-201ENST00000233242 MFSD13AQ14CX5 517 aa7.81□□□□□ -1.16
APOB-201ENST00000233242 SLC14A2Q15849 920 aa7.81□□□□□ -1.16
APOB-201ENST00000233242 ODF4Q2M2E3 257 aa7.81□□□□□ -1.16
APOB-201ENST00000233242 LRIG1Q96JA1 1093 aa7.81□□□□□ -1.16
APOB-201ENST00000233242 SLC38A3Q99624 504 aa7.81□□□□□ -1.16
APOB-201ENST00000233242 CTRCQ99895 268 aa7.81□□□□□ -1.16
APOB-201ENST00000233242 GSX2Q9BZM3 304 aa7.81□□□□□ -1.16
APOB-201ENST00000233242 HOXD1Q9GZZ0 328 aa7.81□□□□□ -1.16
APOB-201ENST00000233242 EDDM13A0A1B0GTR0 161 aa7.81□□□□□ -1.16
APOB-201ENST00000233242 E2F3O00716 465 aa7.81□□□□□ -1.16
APOB-201ENST00000233242 DUSP7Q16829 419 aa7.81□□□□□ -1.16
APOB-201ENST00000233242 LPCAT3Q6P1A2 487 aa7.81□□□□□ -1.16
APOB-201ENST00000233242 PSRC1Q6PGN9 363 aaPredicted RBP7.81□□□□□ -1.16
APOB-201ENST00000233242 PIGMQ9H3S5 423 aa7.81□□□□□ -1.16
APOB-201ENST00000233242 KLHL42Q9P2K6 505 aa7.81□□□□□ -1.16
APOB-201ENST00000233242 GSRP00390 522 aa7.81□□□□□ -1.16
APOB-201ENST00000233242 HRGP04196 525 aa7.81□□□□□ -1.16
APOB-201ENST00000233242 GHRHRQ02643 423 aa7.81□□□□□ -1.16
APOB-201ENST00000233242 OPCMLQ14982 345 aa7.81□□□□□ -1.16
APOB-201ENST00000233242 SHFQ7M4L6 423 aa7.81□□□□□ -1.16
APOB-201ENST00000233242 LRRC25Q8N386 305 aaPredicted RBP7.81□□□□□ -1.16
APOB-201ENST00000233242 TRAM1L1Q8N609 369 aa7.81□□□□□ -1.16
APOB-201ENST00000233242 ZNF454Q8N9F8 522 aa7.81□□□□□ -1.16
APOB-201ENST00000233242 ANGPTL6Q8NI99 470 aa7.81□□□□□ -1.16
APOB-201ENST00000233242 ZNF461Q8TAF7 563 aa7.81□□□□□ -1.16
APOB-201ENST00000233242 CCDC88AQ3V6T2 1871 aa7.81□□□□□ -1.16
APOB-201ENST00000233242 ZNF705FA8MVS1 300 aaPredicted RBP7.81□□□□□ -1.16
APOB-201ENST00000233242 GPRIN2O60269 458 aa7.81□□□□□ -1.16
APOB-201ENST00000233242 ZNF705DP0CH99 300 aaPredicted RBP7.81□□□□□ -1.16
APOB-201ENST00000233242 ZNF705BP0CI00 300 aaPredicted RBP7.81□□□□□ -1.16
APOB-201ENST00000233242 IL13RA1P78552 427 aa7.81□□□□□ -1.16
APOB-201ENST00000233242 PINK1Q9BXM7 581 aa7.81□□□□□ -1.16
APOB-201ENST00000233242 MVB12BQ9H7P6 319 aa7.81□□□□□ -1.16
APOB-201ENST00000233242 ELOVL2Q9NXB9 296 aa7.81□□□□□ -1.16
APOB-201ENST00000233242 GPR45Q9Y5Y3 372 aa7.81□□□□□ -1.16
APOB-201ENST00000233242 NUPL2O15504 423 aaKnown RBP7.8□□□□□ -1.16
APOB-201ENST00000233242 SUOXP51687 545 aa7.8□□□□□ -1.16
APOB-201ENST00000233242 ERVK-21P61565 698 aa7.8□□□□□ -1.16
APOB-201ENST00000233242 SYT6Q5T7P8 510 aaPredicted RBP7.8□□□□□ -1.16
APOB-201ENST00000233242 TIGD3Q6B0B8 471 aa7.8□□□□□ -1.16
APOB-201ENST00000233242 SLC39A13Q96H72 371 aa7.8□□□□□ -1.16
APOB-201ENST00000233242 SAMD11Q96NU1 681 aa7.8□□□□□ -1.16
APOB-201ENST00000233242 METTL17Q9H7H0 456 aaPredicted RBP7.8□□□□□ -1.16
APOB-201ENST00000233242 TXNL4BQ9NX01 149 aaKnown RBP7.8□□□□□ -1.16
APOB-201ENST00000233242 OR6C2Q9NZP2 312 aa7.8□□□□□ -1.16
APOB-201ENST00000233242 LOC105369274A0A096LPK9 316 aa7.8□□□□□ -1.16
APOB-201ENST00000233242 F7P08709 466 aaPredicted RBP7.8□□□□□ -1.16
APOB-201ENST00000233242 GJA1P17302 382 aa7.8□□□□□ -1.16
APOB-201ENST00000233242 HLA-DMAP28067 261 aa7.8□□□□□ -1.16
APOB-201ENST00000233242 SERPINF1P36955 418 aa7.8□□□□□ -1.16
APOB-201ENST00000233242 TAS2R38P59533 333 aa7.8□□□□□ -1.16
APOB-201ENST00000233242 PLK5Q496M5 336 aa7.8□□□□□ -1.16
APOB-201ENST00000233242 OR4N4Q8N0Y3 316 aa7.8□□□□□ -1.16
APOB-201ENST00000233242 ZFP41Q8N8Y5 198 aa7.8□□□□□ -1.16
APOB-201ENST00000233242 ZNF175Q9Y473 711 aa7.8□□□□□ -1.16
APOB-201ENST00000233242 PPP1R2P9O14990 202 aa7.8□□□□□ -1.16
APOB-201ENST00000233242 CRHR2Q13324 411 aa7.8□□□□□ -1.16
APOB-201ENST00000233242 NLRP8Q86W28 1048 aa7.8□□□□□ -1.16
APOB-201ENST00000233242 HERVK_113Q902F9 699 aa7.8□□□□□ -1.16
APOB-201ENST00000233242 SLC7A6Q92536 515 aa7.8□□□□□ -1.16
APOB-201ENST00000233242 RRNAD1Q96FB5 475 aaKnown RBP7.8□□□□□ -1.16
APOB-201ENST00000233242 ICKQ9UPZ9 632 aa7.8□□□□□ -1.16
APOB-201ENST00000233242 ZNF850A8MQ14 1090 aa7.8□□□□□ -1.16
APOB-201ENST00000233242 TOR1AO14656 332 aa7.8□□□□□ -1.16
APOB-201ENST00000233242 ACP2P11117 423 aa7.8□□□□□ -1.16
APOB-201ENST00000233242 FAM205BPQ63HN1 556 aa7.8□□□□□ -1.16
APOB-201ENST00000233242 C22orf39Q6P5X5 142 aa7.8□□□□□ -1.16
APOB-201ENST00000233242 C10orf90Q96M02 699 aa7.8□□□□□ -1.16
APOB-201ENST00000233242 SLC25A31Q9H0C2 315 aa7.8□□□□□ -1.16
APOB-201ENST00000233242 GSTO2Q9H4Y5 243 aa7.8□□□□□ -1.16
APOB-201ENST00000233242 MTHFD2LQ9H903 347 aaPredicted RBP7.8□□□□□ -1.16
APOB-201ENST00000233242 MAS1P04201 325 aa7.8□□□□□ -1.16
APOB-201ENST00000233242 ACTBL2Q562R1 376 aa7.8□□□□□ -1.16
APOB-201ENST00000233242 C9orf131Q5VYM1 1079 aa7.8□□□□□ -1.16
APOB-201ENST00000233242 PLBD1Q6P4A8 553 aa7.8□□□□□ -1.16
APOB-201ENST00000233242 TSSK4Q6SA08 328 aa7.8□□□□□ -1.16
APOB-201ENST00000233242 SLC35F2Q8IXU6 374 aa7.8□□□□□ -1.16
APOB-201ENST00000233242 PHOSPHO1Q8TCT1 267 aa7.8□□□□□ -1.16
APOB-201ENST00000233242 SMOQ99835 787 aa7.8□□□□□ -1.16
APOB-201ENST00000233242 PTGES2Q9H7Z7 377 aa7.8□□□□□ -1.16
APOB-201ENST00000233242 PTGDR2Q9Y5Y4 395 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms