RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 LARS2Q15031 903 aaKnown RBP20.58■□□□□ 0.89
SMARCD2-201ENST00000225742 DESI1Q6ICB0 168 aa20.58■□□□□ 0.89
SMARCD2-201ENST00000225742 CCBE1Q6UXH8 406 aaPredicted RBP20.58■□□□□ 0.89
SMARCD2-201ENST00000225742 TMEM184AQ6ZMB5 413 aa20.58■□□□□ 0.89
SMARCD2-201ENST00000225742 AKAP14Q86UN6 197 aa20.58■□□□□ 0.89
SMARCD2-201ENST00000225742 TM4SF19Q96DZ7 209 aa20.58■□□□□ 0.89
SMARCD2-201ENST00000225742 MYADMQ96S97 322 aa20.58■□□□□ 0.89
SMARCD2-201ENST00000225742 TWSG1Q9GZX9 223 aa20.58■□□□□ 0.89
SMARCD2-201ENST00000225742 QRSL1Q9H0R6 528 aaKnown RBP20.58■□□□□ 0.89
SMARCD2-201ENST00000225742 SYNPO2LQ9H987 977 aa20.58■□□□□ 0.89
SMARCD2-201ENST00000225742 KRCC1Q9NPI7 259 aaPredicted RBP20.58■□□□□ 0.89
SMARCD2-201ENST00000225742 EQTNQ9NQ60 294 aa20.58■□□□□ 0.89
SMARCD2-201ENST00000225742 CMAHPQ9Y471 501 aa20.58■□□□□ 0.89
SMARCD2-201ENST00000225742 DOCK8Q8NF50 2099 aa20.58■□□□□ 0.88
SMARCD2-201ENST00000225742 URADA6NGE7 173 aa20.57■□□□□ 0.88
SMARCD2-201ENST00000225742 CPSF4LA6NMK7 179 aaKnown RBP20.57■□□□□ 0.88
SMARCD2-201ENST00000225742 TNFSF14O43557 240 aa20.57■□□□□ 0.88
SMARCD2-201ENST00000225742 SLC35G6P0C7Q6 338 aa20.57■□□□□ 0.88
SMARCD2-201ENST00000225742 ZNF888P0CJ79 500 aaPredicted RBP20.57■□□□□ 0.88
SMARCD2-201ENST00000225742 SMIM10L1P0DMW3 83 aa20.57■□□□□ 0.88
SMARCD2-201ENST00000225742 SPNP16150 400 aa20.57■□□□□ 0.88
SMARCD2-201ENST00000225742 RGS8P57771 180 aaPredicted RBP20.57■□□□□ 0.88
SMARCD2-201ENST00000225742 HSDL2Q6YN16 418 aa20.57■□□□□ 0.88
SMARCD2-201ENST00000225742 PLEKHM3Q6ZWE6 761 aa20.57■□□□□ 0.88
SMARCD2-201ENST00000225742 HMGN2P46Q86SG4 172 aa20.57■□□□□ 0.88
SMARCD2-201ENST00000225742 OR4K14Q8NGD5 310 aa20.57■□□□□ 0.88
SMARCD2-201ENST00000225742 OR8D4Q8NGM9 314 aa20.57■□□□□ 0.88
SMARCD2-201ENST00000225742 KAT2AQ92830 837 aa20.57■□□□□ 0.88
SMARCD2-201ENST00000225742 TRMT61AQ96FX7 289 aaKnown RBP20.57■□□□□ 0.88
SMARCD2-201ENST00000225742 SMIM10Q96HG1 83 aa20.57■□□□□ 0.88
SMARCD2-201ENST00000225742 CTPS2Q9NRF8 586 aa20.57■□□□□ 0.88
SMARCD2-201ENST00000225742 NPAP1Q9NZP6 1156 aa20.57■□□□□ 0.88
SMARCD2-201ENST00000225742 PTGFRNQ9P2B2 879 aa20.57■□□□□ 0.88
SMARCD2-201ENST00000225742 TBC1D29Q9UFV1 150 aa20.57■□□□□ 0.88
SMARCD2-201ENST00000225742 GPR55Q9Y2T6 319 aaPredicted RBP20.57■□□□□ 0.88
SMARCD2-201ENST00000225742 SPIN1Q9Y657 262 aaPredicted RBP20.57■□□□□ 0.88
SMARCD2-201ENST00000225742 A0A1W2PS29 197 aa20.57■□□□□ 0.88
SMARCD2-201ENST00000225742 CPN2P22792 545 aa20.57■□□□□ 0.88
SMARCD2-201ENST00000225742 LSM11P83369 360 aaKnown RBP eCLIP20.57■□□□□ 0.88
SMARCD2-201ENST00000225742 SELENBP1Q13228 472 aa20.57■□□□□ 0.88
SMARCD2-201ENST00000225742 NFATC4Q14934 902 aa20.57■□□□□ 0.88
SMARCD2-201ENST00000225742 ARHGAP11BQ3KRB8 267 aa20.57■□□□□ 0.88
SMARCD2-201ENST00000225742 EIPR1Q53HC9 387 aa20.57■□□□□ 0.88
SMARCD2-201ENST00000225742 MBOAT2Q6ZWT7 520 aa20.57■□□□□ 0.88
SMARCD2-201ENST00000225742 PEX5LQ8IYB4 626 aa20.57■□□□□ 0.88
SMARCD2-201ENST00000225742 FAM181AQ8N9Y4 354 aa20.57■□□□□ 0.88
SMARCD2-201ENST00000225742 ZNF784Q8NCA9 323 aaPredicted RBP20.57■□□□□ 0.88
SMARCD2-201ENST00000225742 ASB15Q8WXK1 588 aa20.57■□□□□ 0.88
SMARCD2-201ENST00000225742 UFD1Q92890 307 aa20.57■□□□□ 0.88
SMARCD2-201ENST00000225742 MSLNLQ96KJ4 702 aa20.57■□□□□ 0.88
SMARCD2-201ENST00000225742 SRMSQ9H3Y6 488 aa20.57■□□□□ 0.88
SMARCD2-201ENST00000225742 IL20Q9NYY1 176 aa20.57■□□□□ 0.88
SMARCD2-201ENST00000225742 NLGN3Q9NZ94 848 aa20.57■□□□□ 0.88
SMARCD2-201ENST00000225742 ZNF443Q9Y2A4 671 aaPredicted RBP20.57■□□□□ 0.88
SMARCD2-201ENST00000225742 CHST2Q9Y4C5 530 aa20.57■□□□□ 0.88
SMARCD2-201ENST00000225742 SNRNP200O75643 2136 aaKnown RBP20.56■□□□□ 0.88
SMARCD2-201ENST00000225742 SLC30A4O14863 429 aa20.56■□□□□ 0.88
SMARCD2-201ENST00000225742 SLC31A1O15431 190 aa20.56■□□□□ 0.88
SMARCD2-201ENST00000225742 KLF4O43474 513 aa20.56■□□□□ 0.88
SMARCD2-201ENST00000225742 APBB3O95704 486 aa20.56■□□□□ 0.88
SMARCD2-201ENST00000225742 GAAP10253 952 aa20.56■□□□□ 0.88
SMARCD2-201ENST00000225742 ZNF10P21506 573 aaPredicted RBP20.56■□□□□ 0.88
SMARCD2-201ENST00000225742 MAT2AP31153 395 aaKnown RBP20.56■□□□□ 0.88
SMARCD2-201ENST00000225742 TLX1P31314 330 aaPredicted RBP20.56■□□□□ 0.88
SMARCD2-201ENST00000225742 TMEM196Q5HYL7 178 aa20.56■□□□□ 0.88
SMARCD2-201ENST00000225742 FRRS1Q6ZNA5 592 aa20.56■□□□□ 0.88
SMARCD2-201ENST00000225742 OR2L13Q8N349 312 aa20.56■□□□□ 0.88
SMARCD2-201ENST00000225742 KCT2Q8NC54 265 aa20.56■□□□□ 0.88
SMARCD2-201ENST00000225742 SLC9A6Q92581 669 aa20.56■□□□□ 0.88
SMARCD2-201ENST00000225742 FAM46AQ96IP4 442 aaKnown RBP20.56■□□□□ 0.88
SMARCD2-201ENST00000225742 KCTD7Q96MP8 289 aa20.56■□□□□ 0.88
SMARCD2-201ENST00000225742 MCHR1Q99705 422 aa20.56■□□□□ 0.88
SMARCD2-201ENST00000225742 KCMF1Q9P0J7 381 aa20.56■□□□□ 0.88
SMARCD2-201ENST00000225742 CAB39Q9Y376 341 aaPredicted RBP20.56■□□□□ 0.88
SMARCD2-201ENST00000225742 GRIP1Q9Y3R0 1128 aa20.56■□□□□ 0.88
SMARCD2-201ENST00000225742 PCDHGB2Q9Y5G2 931 aa20.56■□□□□ 0.88
SMARCD2-201ENST00000225742 WWP2O00308 870 aa20.55■□□□□ 0.88
SMARCD2-201ENST00000225742 BTN3A3O00478 584 aa20.55■□□□□ 0.88
SMARCD2-201ENST00000225742 RGS5O15539 181 aa20.55■□□□□ 0.88
SMARCD2-201ENST00000225742 CDRT1O95170 752 aa20.55■□□□□ 0.88
SMARCD2-201ENST00000225742 HMGN1P05114 100 aa20.55■□□□□ 0.88
SMARCD2-201ENST00000225742 SLC9A3P48764 834 aa20.55■□□□□ 0.88
SMARCD2-201ENST00000225742 PDX1P52945 283 aa20.55■□□□□ 0.88
SMARCD2-201ENST00000225742 LTB4RQ15722 352 aa20.55■□□□□ 0.88
SMARCD2-201ENST00000225742 PUS10Q3MIT2 529 aaKnown RBP20.55■□□□□ 0.88
SMARCD2-201ENST00000225742 FAM109BQ6ICB4 259 aaPredicted RBP20.55■□□□□ 0.88
SMARCD2-201ENST00000225742 PARM1Q6UWI2 310 aa20.55■□□□□ 0.88
SMARCD2-201ENST00000225742 NCCRP1Q6ZVX7 275 aaPredicted RBP20.55■□□□□ 0.88
SMARCD2-201ENST00000225742 GDF7Q7Z4P5 450 aa20.55■□□□□ 0.88
SMARCD2-201ENST00000225742 CACTIN-AS1Q8N1I8 211 aa20.55■□□□□ 0.88
SMARCD2-201ENST00000225742 POGLUT1Q8NBL1 392 aa20.55■□□□□ 0.88
SMARCD2-201ENST00000225742 OR7G2Q8NG99 324 aa20.55■□□□□ 0.88
SMARCD2-201ENST00000225742 OR1E3Q8WZA6 343 aa20.55■□□□□ 0.88
SMARCD2-201ENST00000225742 ZG16BQ96DA0 208 aa20.55■□□□□ 0.88
SMARCD2-201ENST00000225742 SLC41A3Q96GZ6 507 aa20.55■□□□□ 0.88
SMARCD2-201ENST00000225742 WDR92Q96MX6 357 aa20.55■□□□□ 0.88
SMARCD2-201ENST00000225742 COQ7Q99807 217 aa20.55■□□□□ 0.88
SMARCD2-201ENST00000225742 IGFLR1Q9H665 355 aa20.55■□□□□ 0.88
SMARCD2-201ENST00000225742 SACM1LQ9NTJ5 587 aa20.55■□□□□ 0.88
SMARCD2-201ENST00000225742 NCKAP1Q9Y2A7 1128 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms