RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 LYPD4Q6UWN0 246 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 BEND4Q6ZU67 534 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 WDR20Q8TBZ3 569 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 BORCS6Q96GS4 357 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 GSX2Q9BZM3 304 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 NMNAT1Q9HAN9 279 aaPredicted RBP9.93□□□□□ -0.82
VCL-201ENST00000211998 IL21RQ9HBE5 538 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 DCAF13Q9NV06 445 aaKnown RBP9.93□□□□□ -0.82
VCL-201ENST00000211998 FBXL2Q9UKC9 423 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 HS3ST4Q9Y661 456 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 COL14A1Q05707 1796 aaKnown RBP9.93□□□□□ -0.82
VCL-201ENST00000211998 SLC6A9P48067 706 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 CRYZQ08257 329 aaKnown RBP9.93□□□□□ -0.82
VCL-201ENST00000211998 IRF5Q13568 498 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 TMEM164Q5U3C3 297 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 CORO6Q6QEF8 472 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 EPYCQ99645 322 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 GRHPRQ9UBQ7 328 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 LSM5Q9Y4Y9 91 aaKnown RBP9.93□□□□□ -0.82
VCL-201ENST00000211998 A0A0D9SG52 128 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 METTL15A6NJ78 407 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 KDELR3O43731 214 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 MED6O75586 246 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 PRSS3P35030 304 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 CDKN2DP55273 166 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 CAV3P56539 151 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 BAK1Q16611 211 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 PDSS1Q5T2R2 415 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 OR56B4Q8NH76 319 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 ANGPTL6Q8NI99 470 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 DGAT2Q96PD7 388 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 TBL1XR1Q9BZK7 514 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 KATNBL1Q9H079 304 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 SMCO4Q9NRQ5 59 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 DHDHQ9UQ10 334 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 AK6Q9Y3D8 172 aaKnown RBP9.93□□□□□ -0.82
VCL-201ENST00000211998 ADAM18Q9Y3Q7 739 aa9.93□□□□□ -0.82
VCL-201ENST00000211998 HSBP1L1C9JCN9 74 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 SHOXO15266 292 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 OR12D1P0DN82 309 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 ZNF16P17020 682 aaPredicted RBP9.92□□□□□ -0.82
VCL-201ENST00000211998 PBX2P40425 430 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 GPR17Q13304 367 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 CHRNA6Q15825 494 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.92□□□□□ -0.823e-7■■■□□ 16.9
VCL-201ENST00000211998 TPRG1Q6ZUI0 275 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 LRRC28Q86X40 367 aaPredicted RBP9.92□□□□□ -0.82
VCL-201ENST00000211998 OR56A1Q8NGH5 318 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 MAL2Q969L2 176 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 L3HYPDHQ96EM0 354 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 MCCC2Q9HCC0 563 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 RASD1Q9Y272 281 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 SPEF2Q9C093 1822 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 MYH10P35580 1976 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 FMN2Q9NZ56 1722 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 EFCAB7A8K855 629 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 ACOT7O00154 380 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 RAB3DO95716 219 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 TBX18O95935 607 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 CSF1P09603 554 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 HAPLN1P10915 354 aaPredicted RBP9.92□□□□□ -0.82
VCL-201ENST00000211998 JUNBP17275 347 aaPredicted RBP9.92□□□□□ -0.82
VCL-201ENST00000211998 DPP6P42658 865 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 CTSOP43234 321 aaPredicted RBP9.92□□□□□ -0.82
VCL-201ENST00000211998 SLC26A5P58743 744 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 TDGQ13569 410 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 RAB11BQ15907 218 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 HMGN2P46Q86SG4 172 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 TMEM200AQ86VY9 491 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 SERPINA12Q8IW75 414 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 DCAF4L2Q8NA75 395 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 ANKK1Q8NFD2 765 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 BBS10Q8TAM1 723 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 SMAP2Q8WU79 429 aaPredicted RBP9.92□□□□□ -0.82
VCL-201ENST00000211998 SLC35F5Q8WV83 523 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 KLK6Q92876 244 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 HOXD1Q9GZZ0 328 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 SLC16A8O95907 504 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 ENPP2Q13822 863 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 RCAN2Q14206 197 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 OR4D1Q15615 310 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 SMUG1Q53HV7 270 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 TOR2AQ5JU69 321 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 HIST2H3PS2Q5TEC6 136 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 FAM83HQ6ZRV2 1179 aaPredicted RBP9.92□□□□□ -0.82
VCL-201ENST00000211998 TEX26Q8N6G2 289 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 OR4E2Q8NGC2 313 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 OR52H1Q8NGJ2 320 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 OR51A7Q8NH64 312 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 SUN3Q8TAQ9 357 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 GIMAP5Q96F15 307 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 STRA6Q9BX79 667 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 TDP1Q9NUW8 608 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 CNOT2Q9NZN8 540 aaKnown RBP9.92□□□□□ -0.82
VCL-201ENST00000211998 MEIS3P2A8K0S8 358 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 ADRB1P08588 477 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 GRPRP30550 384 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 CLDN8P56748 225 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 SERINC3Q13530 473 aa9.92□□□□□ -0.82
VCL-201ENST00000211998 PLBD1Q6P4A8 553 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms