RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 DNASE1P24855 282 aa15.75■□□□□ 0.11
CTDP1-201ENST00000075430 TRIM23P36406 574 aa15.75■□□□□ 0.11
CTDP1-201ENST00000075430 SOX9P48436 509 aa15.75■□□□□ 0.11
CTDP1-201ENST00000075430 BNC1Q01954 994 aa15.75■□□□□ 0.11
CTDP1-201ENST00000075430 GPR155Q7Z3F1 870 aa15.75■□□□□ 0.11
CTDP1-201ENST00000075430 KIF18BQ86Y91 864 aa15.75■□□□□ 0.11
CTDP1-201ENST00000075430 ZNF671Q8TAW3 534 aa15.75■□□□□ 0.11
CTDP1-201ENST00000075430 TMEM175Q9BSA9 504 aa15.75■□□□□ 0.11
CTDP1-201ENST00000075430 CACNG6Q9BXT2 260 aa15.75■□□□□ 0.11
CTDP1-201ENST00000075430 MS4A7Q9GZW8 240 aaPredicted RBP15.75■□□□□ 0.11
CTDP1-201ENST00000075430 NLGN3Q9NZ94 848 aa15.75■□□□□ 0.11
CTDP1-201ENST00000075430 TNFRSF10DQ9UBN6 386 aa15.75■□□□□ 0.11
CTDP1-201ENST00000075430 PLPP1O14494 284 aa15.75■□□□□ 0.11
CTDP1-201ENST00000075430 HLA-DPB1P04440 258 aa15.75■□□□□ 0.11
CTDP1-201ENST00000075430 SNRPBP14678 240 aaKnown RBP15.75■□□□□ 0.11
CTDP1-201ENST00000075430 ZNF628Q5EBL2 1059 aa15.75■□□□□ 0.11
CTDP1-201ENST00000075430 TMEM107Q6UX40 140 aa15.75■□□□□ 0.11
CTDP1-201ENST00000075430 GDPGP1Q6ZNW5 385 aa15.75■□□□□ 0.11
CTDP1-201ENST00000075430 BOLLQ8N9W6 283 aaKnown RBP15.75■□□□□ 0.11
CTDP1-201ENST00000075430 RAD51AP1Q96B01 352 aa15.75■□□□□ 0.11
CTDP1-201ENST00000075430 SAMD8Q96LT4 415 aa15.75■□□□□ 0.11
CTDP1-201ENST00000075430 CWH43Q9H720 699 aa15.75■□□□□ 0.11
CTDP1-201ENST00000075430 PAK6Q9NQU5 681 aaPredicted RBP15.75■□□□□ 0.11
CTDP1-201ENST00000075430 RFPL3O75679 317 aa15.74■□□□□ 0.11
CTDP1-201ENST00000075430 CFDP00746 253 aaPredicted RBP15.74■□□□□ 0.11
CTDP1-201ENST00000075430 MPC1LP0DKB6 136 aa15.74■□□□□ 0.11
CTDP1-201ENST00000075430 STOMP27105 288 aa15.74■□□□□ 0.11
CTDP1-201ENST00000075430 LIMK1P53667 647 aa15.74■□□□□ 0.11
CTDP1-201ENST00000075430 CLDN22Q8N7P3 220 aa15.74■□□□□ 0.11
CTDP1-201ENST00000075430 GLYATL1Q969I3 302 aa15.74■□□□□ 0.11
CTDP1-201ENST00000075430 DNAJA3Q96EY1 480 aa15.74■□□□□ 0.11
CTDP1-201ENST00000075430 HYLS1Q96M11 299 aa15.74■□□□□ 0.11
CTDP1-201ENST00000075430 DHRS9Q9BPW9 319 aa15.74■□□□□ 0.11
CTDP1-201ENST00000075430 KCNN3Q9UGI6 736 aa15.74■□□□□ 0.11
CTDP1-201ENST00000075430 DIMT1Q9UNQ2 313 aaKnown RBP15.74■□□□□ 0.11
CTDP1-201ENST00000075430 GPR55Q9Y2T6 319 aaPredicted RBP15.74■□□□□ 0.11
CTDP1-201ENST00000075430 ANTXRLA6NF34 631 aa15.74■□□□□ 0.11
CTDP1-201ENST00000075430 PRR23D1E9PI22 279 aaPredicted RBP15.74■□□□□ 0.11
CTDP1-201ENST00000075430 LGALS8O00214 317 aa15.74■□□□□ 0.11
CTDP1-201ENST00000075430 TGM5O43548 720 aa15.74■□□□□ 0.11
CTDP1-201ENST00000075430 MMP20O60882 483 aa15.74■□□□□ 0.11
CTDP1-201ENST00000075430 C1orf105O95561 183 aa15.74■□□□□ 0.11
CTDP1-201ENST00000075430 PRR23D2P0DMB1 279 aaPredicted RBP15.74■□□□□ 0.11
CTDP1-201ENST00000075430 CPEP16870 476 aa15.74■□□□□ 0.11
CTDP1-201ENST00000075430 TBXA2RP21731 343 aa15.74■□□□□ 0.11
CTDP1-201ENST00000075430 SNRPGP62308 76 aaKnown RBP15.74■□□□□ 0.11
CTDP1-201ENST00000075430 POLR2LP62875 67 aaKnown RBP15.74■□□□□ 0.11
CTDP1-201ENST00000075430 ID2Q02363 134 aa15.74■□□□□ 0.11
CTDP1-201ENST00000075430 PCDH1Q08174 1060 aa15.74■□□□□ 0.11
CTDP1-201ENST00000075430 PRAMEF14Q5SWL7 426 aa15.74■□□□□ 0.11
CTDP1-201ENST00000075430 PRAMEF13Q5VWM6 474 aa15.74■□□□□ 0.11
CTDP1-201ENST00000075430 C19orf48Q6RUI8 117 aa15.74■□□□□ 0.11
CTDP1-201ENST00000075430 ADGRF3Q8IZF5 1079 aa15.74■□□□□ 0.11
CTDP1-201ENST00000075430 CBARPQ8N350 705 aaPredicted RBP15.74■□□□□ 0.11
CTDP1-201ENST00000075430 FTMTQ8N4E7 242 aa15.74■□□□□ 0.11
CTDP1-201ENST00000075430 TOMM5Q8N4H5 51 aa15.74■□□□□ 0.11
CTDP1-201ENST00000075430 CHCHD4Q8N4Q1 142 aa15.74■□□□□ 0.11
CTDP1-201ENST00000075430 OR11H7Q8NGC8 314 aa15.74■□□□□ 0.11
CTDP1-201ENST00000075430 SCML1Q9UN30 329 aa15.74■□□□□ 0.11
CTDP1-201ENST00000075430 A4GNTQ9UNA3 340 aa15.74■□□□□ 0.11
CTDP1-201ENST00000075430 NPIPA5A0A0B4J1W7 369 aa15.74■□□□□ 0.11
CTDP1-201ENST00000075430 PRAMEF27A3QJZ7 478 aa15.74■□□□□ 0.11
CTDP1-201ENST00000075430 NPIPA7E9PJI5 369 aa15.74■□□□□ 0.11
CTDP1-201ENST00000075430 NPIPA8P0DM63 369 aa15.74■□□□□ 0.11
CTDP1-201ENST00000075430 CSF2RAP15509 400 aa15.74■□□□□ 0.11
CTDP1-201ENST00000075430 PRPH2P23942 346 aa15.74■□□□□ 0.11
CTDP1-201ENST00000075430 MAGEB1P43366 347 aa15.74■□□□□ 0.11
CTDP1-201ENST00000075430 EEF1A2Q05639 463 aaKnown RBP15.74■□□□□ 0.11
CTDP1-201ENST00000075430 SLC36A4Q6YBV0 504 aa15.74■□□□□ 0.11
CTDP1-201ENST00000075430 CEACAM19Q7Z692 300 aa15.74■□□□□ 0.11
CTDP1-201ENST00000075430 TMEM150AQ86TG1 271 aa15.74■□□□□ 0.11
CTDP1-201ENST00000075430 BPHLQ86WA6 291 aaPredicted RBP15.74■□□□□ 0.11
CTDP1-201ENST00000075430 ZNF296Q8WUU4 475 aaPredicted RBP15.74■□□□□ 0.11
CTDP1-201ENST00000075430 MSLNLQ96KJ4 702 aa15.74■□□□□ 0.11
CTDP1-201ENST00000075430 ZNF354BQ96LW1 612 aa15.74■□□□□ 0.11
CTDP1-201ENST00000075430 ARPC5LQ9BPX5 153 aa15.74■□□□□ 0.11
CTDP1-201ENST00000075430 RNF32Q9H0A6 362 aa15.74■□□□□ 0.11
CTDP1-201ENST00000075430 TMEM38AQ9H6F2 299 aa15.74■□□□□ 0.11
CTDP1-201ENST00000075430 IRAK3Q9Y616 596 aa15.74■□□□□ 0.11
CTDP1-201ENST00000075430 TRBV23OR9-2A0A075B6M9 112 aa15.73■□□□□ 0.11
CTDP1-201ENST00000075430 ANKRD61A6NGH8 418 aa15.73■□□□□ 0.11
CTDP1-201ENST00000075430 CDK2AP1O14519 115 aa15.73■□□□□ 0.11
CTDP1-201ENST00000075430 TMPRSS11DO60235 418 aa15.73■□□□□ 0.11
CTDP1-201ENST00000075430 ARHGEF15O94989 841 aa15.73■□□□□ 0.11
CTDP1-201ENST00000075430 HMGN2P05204 90 aaKnown RBP15.73■□□□□ 0.11
CTDP1-201ENST00000075430 MAPK8P45983 427 aa15.73■□□□□ 0.11
CTDP1-201ENST00000075430 ATP12AP54707 1039 aa15.73■□□□□ 0.11
CTDP1-201ENST00000075430 EPHA5P54756 1037 aa15.73■□□□□ 0.11
CTDP1-201ENST00000075430 CLDN12P56749 244 aa15.73■□□□□ 0.11
CTDP1-201ENST00000075430 PCBP3P57721 371 aaKnown RBP15.73■□□□□ 0.11
CTDP1-201ENST00000075430 RGS8P57771 180 aaPredicted RBP15.73■□□□□ 0.11
CTDP1-201ENST00000075430 SLC25A35Q3KQZ1 300 aa15.73■□□□□ 0.11
CTDP1-201ENST00000075430 ZNF311Q5JNZ3 666 aa15.73■□□□□ 0.11
CTDP1-201ENST00000075430 NXPE4Q6UWF7 544 aa15.73■□□□□ 0.11
CTDP1-201ENST00000075430 OR4N5Q8IXE1 308 aa15.73■□□□□ 0.11
CTDP1-201ENST00000075430 COQ8AQ8NI60 647 aa15.73■□□□□ 0.11
CTDP1-201ENST00000075430 ABHD1Q96SE0 405 aa15.73■□□□□ 0.11
CTDP1-201ENST00000075430 SLC46A2Q9BY10 475 aa15.73■□□□□ 0.11
CTDP1-201ENST00000075430 OR10A4Q9H209 315 aa15.73■□□□□ 0.11
CTDP1-201ENST00000075430 PPP1R3EQ9H7J1 279 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms