RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Ms4a18J3QN01 344 aa15.92■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Vmn1r27K7N688 303 aa15.92■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Il10rbQ61190 349 aa15.92■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Tlx2Q61663 284 aa15.92■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Nlgn2Q69ZK9 836 aa15.92■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Tas2r38Q7TQA6 331 aa15.92■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Olfr1355Q7TQU9 310 aa15.92■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Trim23Q8BGX0 574 aa15.92■□□□□ 0.14
Ctcf-201ENSMUST00000005841 4933430I17RikQ8BHW4 495 aa15.92■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Dpp9Q8BVG4 862 aa15.92■□□□□ 0.14
Ctcf-201ENSMUST00000005841 E330021D16RikQ8BW45 371 aa15.92■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Q8CF31 99 aa15.92■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Sirt5Q8K2C6 310 aa15.92■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Wdr54Q9R0D8 334 aa15.92■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Ighv1-13A0A075B5I0 98 aa15.91■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Olfr316A0A0N4SVP2 306 aa15.91■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Pgm2A2CEK3 580 aa15.91■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Prdx6O08709 224 aaKnown RBP15.91■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Dpm1O70152 260 aa15.91■□□□□ 0.14
Ctcf-201ENSMUST00000005841 TtlP38585 377 aa15.91■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Atoh1P48985 351 aa15.91■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Olfr629Q0VBH3 314 aa15.91■□□□□ 0.14
Ctcf-201ENSMUST00000005841 EndouQ3V188 412 aa15.91■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Olfr318Q5NCD7 306 aa15.91■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Pou4f3Q63955 338 aa15.91■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Trmt6Q8CE96 497 aa15.91■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Olfr1278Q8VF39 313 aa15.91■□□□□ 0.14
Ctcf-201ENSMUST00000005841 MmabQ9D273 237 aa15.91■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Ca7Q9ERQ8 264 aa15.91■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Trpc5Q9QX29 975 aa15.91■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Gm7929A0A286YDV3 213 aa15.91■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Rhox3cA2AWM0 215 aa15.91■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Gm21977F6U3N7 213 aa15.91■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Gm8247F6VRJ8 213 aa15.91■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Gm8005F6YKY3 213 aa15.91■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Gm3015F6ZAP6 213 aa15.91■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Gm8212F6ZMY5 213 aa15.91■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Gm7954F7BAX1 213 aa15.91■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Gm8138F7BY56 213 aa15.91■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Gm8232F7CFJ3 213 aa15.91■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Gm17079F7D8Y4 213 aa15.91■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Rhox3hL7MU37 215 aa15.91■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Gm8165L7N218 213 aa15.91■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Gm8122L7N2C7 213 aa15.91■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Gm17078M0QW51 211 aa15.91■□□□□ 0.14
Ctcf-201ENSMUST00000005841 C1dO35473 141 aa15.91■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Eif4eP63073 217 aaKnown RBP15.91■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Rhox3aQ4TU90 215 aa15.91■□□□□ 0.14
Ctcf-201ENSMUST00000005841 CpmQ80V42 443 aa15.91■□□□□ 0.14
Ctcf-201ENSMUST00000005841 March11Q8CBH7 400 aa15.91■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Cd300eQ8K249 196 aa15.91■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Hyal3Q8VEI3 412 aa15.91■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Vmn1r71Q8VIC0 307 aa15.91■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Marveld3Q9D956 376 aa15.91■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Sac3d1A6H687 427 aa15.91■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Vmn2r108E9PYS0 855 aa15.91■□□□□ 0.14
Ctcf-201ENSMUST00000005841 CtslP06797 334 aa15.91■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Nckap1P28660 1128 aaKnown RBP15.91■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Syt4P40749 425 aa15.91■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Nadsyn1Q711T7 725 aa15.91■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Nyap2Q8BM65 682 aa15.91■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Slc1a7Q8JZR4 559 aa15.91■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Vmn1r69Q8VIC1 319 aa15.91■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Macrod1Q922B1 323 aa15.91■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Elp3Q9CZX0 547 aa15.91■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Phf6Q9D4J7 364 aa15.91■□□□□ 0.14
Ctcf-201ENSMUST00000005841 SelenovD3YXG1 328 aa15.9■□□□□ 0.14
Ctcf-201ENSMUST00000005841 CcnoP0C242 352 aa15.9■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Nudt19P11930 357 aa15.9■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Slc1a3P56564 543 aa15.9■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Rps13P62301 151 aaKnown RBP15.9■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Olfr213Q7TS32 327 aa15.9■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Dlec1Q8BLA1 635 aa15.9■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Faim2Q8K097 317 aa15.9■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Olfr54Q8VFE6 313 aa15.9■□□□□ 0.14
Ctcf-201ENSMUST00000005841 ApofQ91V80 315 aa15.9■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Slc24a3Q99PD7 645 aa15.9■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Olfr630Q9EQQ7 319 aa15.9■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Adam24Q9R160 761 aa15.9■□□□□ 0.14
Ctcf-201ENSMUST00000005841 I0C0044D17RikA6PWL3 169 aa15.9■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Zfp846G3X996 541 aa15.9■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Prl8a2O54832 240 aa15.9■□□□□ 0.14
Ctcf-201ENSMUST00000005841 EnpepP16406 945 aa15.9■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Fbxo40P62932 710 aa15.9■□□□□ 0.14
Ctcf-201ENSMUST00000005841 C1qaP98086 245 aa15.9■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Proser3Q7TSA6 634 aa15.9■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Tspan9Q8BJU2 239 aa15.9■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Q8C0X8 640 aa15.9■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Dlgap5Q8K4R9 808 aa15.9■□□□□ 0.14
Ctcf-201ENSMUST00000005841 SarafQ8R3Q0 334 aa15.9■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Eml3Q8VC03 897 aa15.9■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Olfr96Q8VFE3 313 aa15.9■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Snx11Q91WL6 271 aa15.9■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Spz1Q99MY0 378 aa15.9■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Cldn34aG3UW52 211 aa15.9■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Gm3248K7N721 186 aa15.9■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Egfbp2P36368 261 aa15.9■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Ppm1aP49443 382 aa15.9■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Tsc22d1P62500 1077 aa15.9■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Entpd6Q3U0P5 455 aa15.9■□□□□ 0.14
Retrieved 100 of 22,080 RNA–protein pairs in 23.9 ms