RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 3300002I08RikQ9CXH3 147 aa15.5■□□□□ 0.07
Shh-201ENSMUST00000002708 Fzd2Q9JIP6 570 aa15.5■□□□□ 0.07
Shh-201ENSMUST00000002708 Kcnd3Q9Z0V1 655 aa15.5■□□□□ 0.07
Shh-201ENSMUST00000002708 Auts2A0A087WPF7 1261 aa15.5■□□□□ 0.07
Shh-201ENSMUST00000002708 Spin2-ps6A0A140T8V2 174 aa15.5■□□□□ 0.07
Shh-201ENSMUST00000002708 Gm33543A0A1B0GSI5 81 aa15.5■□□□□ 0.07
Shh-201ENSMUST00000002708 Zfp969A2ART2 485 aa15.5■□□□□ 0.07
Shh-201ENSMUST00000002708 Ccdc7bE9Q9Y3 381 aa15.5■□□□□ 0.07
Shh-201ENSMUST00000002708 Rpl3P27659 403 aaKnown RBP15.5■□□□□ 0.07
Shh-201ENSMUST00000002708 Tbx1P70323 479 aa15.5■□□□□ 0.07
Shh-201ENSMUST00000002708 SgcgP82348 291 aa15.5■□□□□ 0.07
Shh-201ENSMUST00000002708 JupQ02257 745 aaKnown RBP15.5■□□□□ 0.07
Shh-201ENSMUST00000002708 Pnliprp1Q5BKQ4 473 aa15.5■□□□□ 0.07
Shh-201ENSMUST00000002708 Spata13Q5DU57 656 aa15.5■□□□□ 0.07
Shh-201ENSMUST00000002708 Cxcl17Q5UW37 119 aa15.5■□□□□ 0.07
Shh-201ENSMUST00000002708 Olfr728Q7TRM6 311 aa15.5■□□□□ 0.07
Shh-201ENSMUST00000002708 Padi6Q8K3V4 682 aa15.5■□□□□ 0.07
Shh-201ENSMUST00000002708 Noxo1Q8VCM2 349 aa15.5■□□□□ 0.07
Shh-201ENSMUST00000002708 Ogfrl1Q8VE52 464 aa15.5■□□□□ 0.07
Shh-201ENSMUST00000002708 Olfr1387Q8VFA9 311 aa15.5■□□□□ 0.07
Shh-201ENSMUST00000002708 Glyr1Q922P9 546 aaKnown RBP15.5■□□□□ 0.07
Shh-201ENSMUST00000002708 CenpvQ9CXS4 252 aa15.5■□□□□ 0.07
Shh-201ENSMUST00000002708 Mcemp1Q9D8U6 183 aa15.5■□□□□ 0.07
Shh-201ENSMUST00000002708 Lrrc69Q9D9Q0 347 aa15.5■□□□□ 0.07
Shh-201ENSMUST00000002708 Vmn1r52Q9EP79 309 aa15.5■□□□□ 0.07
Shh-201ENSMUST00000002708 Sars2Q9JJL8 518 aa15.5■□□□□ 0.07
Shh-201ENSMUST00000002708 Tlr4Q9QUK6 835 aa15.5■□□□□ 0.07
Shh-201ENSMUST00000002708 Gm15013V9GWY0 266 aa15.5■□□□□ 0.07
Shh-201ENSMUST00000002708 1700028J19RikA0A0U1RP08 172 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 SpaarA0A1B0GSZ0 75 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 GmlE9PX31 176 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Galnt9G3X942 604 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Gosr2O35166 212 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Ube2fbQ3UWQ3 185 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 UnklQ5FWH2 727 aaKnown RBP15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Mylk4Q5SUV5 386 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Elavl3Q60900 367 aaKnown RBP15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 EngQ63961 653 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Glt8d2Q640P4 349 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 VclQ64727 1066 aaKnown RBP15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Arhgap22Q8BL80 702 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Steap2Q8BWB6 489 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Cdc123Q8CII2 336 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Mill2Q8HWE5 355 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Pex12Q8VC48 359 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Ugt2b37Q8VCN3 530 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Olfr771Q8VFH6 317 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Olfr53Q8VGL8 312 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Vsx1Q91V10 363 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Osbpl3Q9DBS9 855 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Sppl2aQ9JJF9 523 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Gm14744B1AVU4 173 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Hs3st4D3YVV6 449 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Gm3149E9PW52 257 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Gm8362K7N6Y6 257 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Gm17026K7N6Z0 213 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Vmn2r93L7N1Z9 857 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 IlkO55222 452 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Lad1P57016 528 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Ccdc106Q3ULM0 279 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Awat2Q6E1M8 333 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Snrnp200Q6P4T2 2136 aaKnown RBP15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Osgepl1Q6PEB4 414 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Olfr128Q7TRJ1 308 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Trmt61aQ80XC2 290 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Ptpn7Q8BUM3 359 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Ugt2a3Q8BWQ1 534 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 SprnQ8BWU1 147 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Q8C0X8 640 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Rae1Q8C570 368 aaKnown RBP15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 EndovQ8C9A2 338 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Tab1Q8CF89 502 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Coq9Q8K1Z0 313 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Zdhhc5Q8VDZ4 715 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Olfr444Q8VFS6 310 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Olfr649Q8VGW1 312 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Myl9Q9CQ19 172 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Trmt5Q9D0C4 501 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 5430402E10RikQ9D3N5 173 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Clca3a2Q9EQR4 902 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 ClpxQ9JHS4 634 aaKnown RBP15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Kcnj10Q9JM63 379 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Trav1A0A075B5Z4 110 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Tyw5A2RSX7 315 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Kctd17E0CYQ0 296 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Olfr640E9Q7P5 314 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Slc6a6O35316 621 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 NnmtO55239 264 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 DhfrP00375 187 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Nudt19P11930 357 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Hoxd1Q01822 328 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Hif3aQ0VBL6 662 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Elfn2Q68FM6 823 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Trim46Q7TNM2 759 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Smyd4Q8BTK5 799 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Znf786Q8BV42 777 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 BC024139Q8BVJ3 772 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Vmn1r192Q8K4C9 300 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Nxnl1Q8VC33 217 aa15.49■□□□□ 0.07
Shh-201ENSMUST00000002708 Tmigd1Q9D7L8 261 aa15.49■□□□□ 0.07
Retrieved 100 of 22,080 RNA–protein pairs in 49.4 ms