RNA–Protein interactions for RNA: ENST00000640458.1

VPS72-207, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5 BASIC

Gene VPS72, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-207ENST00000640458 ITM2AO43736 263 aa16.71■□□□□ 0.27
VPS72-207ENST00000640458 P04436 131 aa16.71■□□□□ 0.27
VPS72-207ENST00000640458 HOXD4P09016 255 aaPredicted RBP16.71■□□□□ 0.27
VPS72-207ENST00000640458 CCL3P10147 92 aa16.71■□□□□ 0.27
VPS72-207ENST00000640458 SDC1P18827 310 aa16.71■□□□□ 0.27
VPS72-207ENST00000640458 CHRNB4P30926 498 aa16.71■□□□□ 0.27
VPS72-207ENST00000640458 PTGS2P35354 604 aa16.71■□□□□ 0.27
VPS72-207ENST00000640458 RPL38P63173 70 aaKnown RBP16.71■□□□□ 0.27
VPS72-207ENST00000640458 MRPS35P82673 323 aaKnown RBP16.71■□□□□ 0.27
VPS72-207ENST00000640458 NTRK2Q16620 822 aa16.71■□□□□ 0.27
VPS72-207ENST00000640458 SLC22A10Q63ZE4 541 aa16.71■□□□□ 0.27
VPS72-207ENST00000640458 TMEM211Q6ICI0 200 aa16.71■□□□□ 0.27
VPS72-207ENST00000640458 Q71RC1 249 aaPredicted RBP16.71■□□□□ 0.27
VPS72-207ENST00000640458 FAM9CQ8IZT9 166 aa16.71■□□□□ 0.27
VPS72-207ENST00000640458 SIMC1Q8NDZ2 872 aa16.71■□□□□ 0.27
VPS72-207ENST00000640458 PPP3R2Q96LZ3 170 aa16.71■□□□□ 0.27
VPS72-207ENST00000640458 C7orf26Q96N11 449 aa16.71■□□□□ 0.27
VPS72-207ENST00000640458 FAM173AQ9BQD7 235 aa16.71■□□□□ 0.27
VPS72-207ENST00000640458 NSRP1Q9H0G5 558 aaKnown RBP16.71■□□□□ 0.27
VPS72-207ENST00000640458 LIME1Q9H400 295 aa16.71■□□□□ 0.27
VPS72-207ENST00000640458 DLL4Q9NR61 685 aa16.71■□□□□ 0.27
VPS72-207ENST00000640458 PRODH2Q9UF12 536 aa16.71■□□□□ 0.27
VPS72-207ENST00000640458 ADAM21Q9UKJ8 722 aa16.71■□□□□ 0.27
VPS72-207ENST00000640458 DTX4Q9Y2E6 619 aa16.71■□□□□ 0.27
VPS72-207ENST00000640458 RPH3AQ9Y2J0 694 aaPredicted RBP16.71■□□□□ 0.27
VPS72-207ENST00000640458 NPFFR2Q9Y5X5 522 aa16.71■□□□□ 0.27
VPS72-207ENST00000640458 FLNAP21333 2647 aaKnown RBP16.71■□□□□ 0.27
VPS72-207ENST00000640458 SLCO1B7G3V0H7 640 aa16.7■□□□□ 0.26
VPS72-207ENST00000640458 TBX19O60806 448 aa16.7■□□□□ 0.26
VPS72-207ENST00000640458 SNNO75324 88 aaPredicted RBP16.7■□□□□ 0.26
VPS72-207ENST00000640458 LYPLA1O75608 230 aaPredicted RBP16.7■□□□□ 0.26
VPS72-207ENST00000640458 FOSL1P15407 271 aa16.7■□□□□ 0.26
VPS72-207ENST00000640458 RFC3P40938 356 aa16.7■□□□□ 0.26
VPS72-207ENST00000640458 EMDP50402 254 aa16.7■□□□□ 0.26
VPS72-207ENST00000640458 NRG3P56975 720 aa16.7■□□□□ 0.26
VPS72-207ENST00000640458 DCAF7P61962 342 aa16.7■□□□□ 0.26
VPS72-207ENST00000640458 GALNTL6Q49A17 601 aa16.7■□□□□ 0.26
VPS72-207ENST00000640458 GK5Q6ZS86 529 aa16.7■□□□□ 0.26
VPS72-207ENST00000640458 WDR75Q8IWA0 830 aaKnown RBP16.7■□□□□ 0.26
VPS72-207ENST00000640458 FAM57AQ8TBR7 257 aa16.7■□□□□ 0.26
VPS72-207ENST00000640458 RND1Q92730 232 aa16.7■□□□□ 0.26
VPS72-207ENST00000640458 KAT2AQ92830 837 aa16.7■□□□□ 0.26
VPS72-207ENST00000640458 ZNF764Q96H86 408 aaPredicted RBP16.7■□□□□ 0.26
VPS72-207ENST00000640458 C3orf30Q96M34 536 aa16.7■□□□□ 0.26
VPS72-207ENST00000640458 ITPAQ9BY32 194 aa16.7■□□□□ 0.26
VPS72-207ENST00000640458 NXF5Q9H1B4 397 aaKnown RBP16.7■□□□□ 0.26
VPS72-207ENST00000640458 ZNF395Q9H8N7 513 aaPredicted RBP16.7■□□□□ 0.26
VPS72-207ENST00000640458 CNIH4Q9P003 139 aa16.7■□□□□ 0.26
VPS72-207ENST00000640458 HRH3Q9Y5N1 445 aa16.7■□□□□ 0.26
VPS72-207ENST00000640458 A0A0G2JMM0 328 aa16.69■□□□□ 0.26
VPS72-207ENST00000640458 A0A1B0GTH9 108 aa16.69■□□□□ 0.26
VPS72-207ENST00000640458 A0A1W2PPB8 328 aa16.69■□□□□ 0.26
VPS72-207ENST00000640458 A0A1W2PRS3 328 aa16.69■□□□□ 0.26
VPS72-207ENST00000640458 KIR3DP1A8MWS1 328 aa16.69■□□□□ 0.26
VPS72-207ENST00000640458 G3V3Y1 287 aa16.69■□□□□ 0.26
VPS72-207ENST00000640458 TFECO14948 347 aaPredicted RBP16.69■□□□□ 0.26
VPS72-207ENST00000640458 PLOD3O60568 738 aa16.69■□□□□ 0.26
VPS72-207ENST00000640458 SLITRK5O94991 958 aa16.69■□□□□ 0.26
VPS72-207ENST00000640458 NAGAP17050 411 aa16.69■□□□□ 0.26
VPS72-207ENST00000640458 DRD5P21918 477 aa16.69■□□□□ 0.26
VPS72-207ENST00000640458 LSP1P33241 339 aa16.69■□□□□ 0.26
VPS72-207ENST00000640458 PPICP45877 212 aa16.69■□□□□ 0.26
VPS72-207ENST00000640458 RPL14P50914 215 aaKnown RBP16.69■□□□□ 0.26
VPS72-207ENST00000640458 NCBP2P52298 156 aaKnown RBP eCLIP16.69■□□□□ 0.26
VPS72-207ENST00000640458 TMEM64Q6YI46 380 aa16.69■□□□□ 0.26
VPS72-207ENST00000640458 FAM47EQ6ZV65 393 aa16.69■□□□□ 0.26
VPS72-207ENST00000640458 CCDC71Q8IV32 467 aaPredicted RBP16.69■□□□□ 0.26
VPS72-207ENST00000640458 FBXW8Q8N3Y1 598 aa16.69■□□□□ 0.26
VPS72-207ENST00000640458 OR10G3Q8NGC4 313 aa16.69■□□□□ 0.26
VPS72-207ENST00000640458 HSPBAP1Q96EW2 488 aa16.69■□□□□ 0.26
VPS72-207ENST00000640458 CHMP6Q96FZ7 201 aa16.69■□□□□ 0.26
VPS72-207ENST00000640458 LCORQ96JN0 433 aaPredicted RBP16.69■□□□□ 0.26
VPS72-207ENST00000640458 TSSK3Q96PN8 268 aa16.69■□□□□ 0.26
VPS72-207ENST00000640458 C20orf27Q9GZN8 174 aa16.69■□□□□ 0.26
VPS72-207ENST00000640458 REEP4Q9H6H4 257 aa16.69■□□□□ 0.26
VPS72-207ENST00000640458 ST6GALNAC2Q9UJ37 374 aa16.69■□□□□ 0.26
VPS72-207ENST00000640458 CHCHD2Q9Y6H1 151 aaPredicted RBP16.69■□□□□ 0.26
VPS72-207ENST00000640458 A0A087WV62 115 aa16.68■□□□□ 0.26
VPS72-207ENST00000640458 GMNCA6NCL1 334 aa16.68■□□□□ 0.26
VPS72-207ENST00000640458 TP53I11O14683 189 aa16.68■□□□□ 0.26
VPS72-207ENST00000640458 ACOX3O15254 700 aa16.68■□□□□ 0.26
VPS72-207ENST00000640458 HS6ST1O60243 411 aa16.68■□□□□ 0.26
VPS72-207ENST00000640458 PEX11AO75192 247 aa16.68■□□□□ 0.26
VPS72-207ENST00000640458 SKAP2O75563 359 aaPredicted RBP16.68■□□□□ 0.26
VPS72-207ENST00000640458 GLSO94925 669 aaPredicted RBP16.68■□□□□ 0.26
VPS72-207ENST00000640458 JUNP05412 331 aaKnown RBP16.68■□□□□ 0.26
VPS72-207ENST00000640458 TROVE2P10155 538 aaKnown RBP eCLIP16.68■□□□□ 0.26
VPS72-207ENST00000640458 BCKDHAP12694 445 aa16.68■□□□□ 0.26
VPS72-207ENST00000640458 MAPK1P28482 360 aa16.68■□□□□ 0.26
VPS72-207ENST00000640458 NTSP30990 170 aa16.68■□□□□ 0.26
VPS72-207ENST00000640458 ASMTP46597 345 aa16.68■□□□□ 0.26
VPS72-207ENST00000640458 DNASE1L1P49184 302 aa16.68■□□□□ 0.26
VPS72-207ENST00000640458 TMED10P49755 219 aaKnown RBP16.68■□□□□ 0.26
VPS72-207ENST00000640458 PPIAP62937 165 aaKnown RBP16.68■□□□□ 0.26
VPS72-207ENST00000640458 OCRLQ01968 901 aa16.68■□□□□ 0.26
VPS72-207ENST00000640458 PLGLB1Q02325 96 aa16.68■□□□□ 0.26
VPS72-207ENST00000640458 FOXO1Q12778 655 aa16.68■□□□□ 0.26
VPS72-207ENST00000640458 RPS6KA2Q15349 733 aa16.68■□□□□ 0.26
VPS72-207ENST00000640458 HYAL4Q2M3T9 481 aa16.68■□□□□ 0.26
VPS72-207ENST00000640458 ATP6AP1LQ52LC2 224 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms