RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 COMTD1Q86VU5 262 aa17.56■□□□□ 0.4
SCARB2-213ENST00000638680 ZSCAN4Q8NAM6 433 aaPredicted RBP17.56■□□□□ 0.4
SCARB2-213ENST00000638680 LMF1Q96S06 567 aa17.56■□□□□ 0.4
SCARB2-213ENST00000638680 ALG8Q9BVK2 526 aa17.56■□□□□ 0.4
SCARB2-213ENST00000638680 SLC12A9Q9BXP2 914 aa17.56■□□□□ 0.4
SCARB2-213ENST00000638680 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.56■□□□□ 0.4
SCARB2-213ENST00000638680 IL33O95760 270 aa17.56■□□□□ 0.4
SCARB2-213ENST00000638680 GGT2P36268 569 aa17.56■□□□□ 0.4
SCARB2-213ENST00000638680 PIN1Q13526 163 aaPredicted RBP17.56■□□□□ 0.4
SCARB2-213ENST00000638680 PCGF3Q3KNV8 242 aa17.56■□□□□ 0.4
SCARB2-213ENST00000638680 DUS1LQ6P1R4 473 aaKnown RBP17.56■□□□□ 0.4
SCARB2-213ENST00000638680 ZER1Q7Z7L7 766 aa17.56■□□□□ 0.4
SCARB2-213ENST00000638680 B3GNT8Q7Z7M8 397 aa17.56■□□□□ 0.4
SCARB2-213ENST00000638680 PGAM5Q96HS1 289 aa17.56■□□□□ 0.4
SCARB2-213ENST00000638680 BRF2Q9HAW0 419 aa17.56■□□□□ 0.4
SCARB2-213ENST00000638680 NFKBIEO00221 500 aa17.56■□□□□ 0.4
SCARB2-213ENST00000638680 CFIP05156 583 aa17.56■□□□□ 0.4
SCARB2-213ENST00000638680 PRDX3P30048 256 aaKnown RBP17.56■□□□□ 0.4
SCARB2-213ENST00000638680 CAMLGP49069 296 aa17.56■□□□□ 0.4
SCARB2-213ENST00000638680 FPGSQ05932 587 aa17.56■□□□□ 0.4
SCARB2-213ENST00000638680 GDPGP1Q6ZNW5 385 aa17.56■□□□□ 0.4
SCARB2-213ENST00000638680 OR5W2Q8NH69 310 aa17.56■□□□□ 0.4
SCARB2-213ENST00000638680 BAZ2AQ9UIF9 1905 aaKnown RBP17.56■□□□□ 0.4
SCARB2-213ENST00000638680 TRAV18A0A075B6X5 111 aa17.55■□□□□ 0.4
SCARB2-213ENST00000638680 GPR37L1O60883 481 aa17.55■□□□□ 0.4
SCARB2-213ENST00000638680 PLCXD2Q0VAA5 305 aa17.55■□□□□ 0.4
SCARB2-213ENST00000638680 C19orf25Q9UFG5 118 aaPredicted RBP17.55■□□□□ 0.4
SCARB2-213ENST00000638680 PCGF2P35227 344 aa17.55■□□□□ 0.4
SCARB2-213ENST00000638680 ACTBP60709 375 aa17.55■□□□□ 0.4
SCARB2-213ENST00000638680 RPS15AP62244 130 aaKnown RBP17.55■□□□□ 0.4
SCARB2-213ENST00000638680 ACTG1P63261 375 aa17.55■□□□□ 0.4
SCARB2-213ENST00000638680 LARP4Q71RC2 724 aaKnown RBP eCLIP17.55■□□□□ 0.4
SCARB2-213ENST00000638680 SLC16A9Q7RTY1 509 aa17.55■□□□□ 0.4
SCARB2-213ENST00000638680 THSD1Q9NS62 852 aa17.55■□□□□ 0.4
SCARB2-213ENST00000638680 ASB4Q9Y574 426 aa17.55■□□□□ 0.4
SCARB2-213ENST00000638680 TRIM64A6NGJ6 449 aa17.55■□□□□ 0.4
SCARB2-213ENST00000638680 SPINT3P49223 89 aa17.55■□□□□ 0.4
SCARB2-213ENST00000638680 HNRNPFP52597 415 aaKnown RBP17.55■□□□□ 0.4
SCARB2-213ENST00000638680 GALK2Q01415 458 aa17.55■□□□□ 0.4
SCARB2-213ENST00000638680 ALG10BQ5I7T1 473 aa17.55■□□□□ 0.4
SCARB2-213ENST00000638680 C7orf50Q9BRJ6 194 aaKnown RBP17.55■□□□□ 0.4
SCARB2-213ENST00000638680 NPIPA2E9PIF3 369 aa17.55■□□□□ 0.4
SCARB2-213ENST00000638680 F8W036 122 aa17.55■□□□□ 0.4
SCARB2-213ENST00000638680 NPIPA3F8WFD2 350 aa17.55■□□□□ 0.4
SCARB2-213ENST00000638680 CDK1P06493 297 aa17.55■□□□□ 0.4
SCARB2-213ENST00000638680 INHBCP55103 352 aa17.55■□□□□ 0.4
SCARB2-213ENST00000638680 RPS21P63220 83 aaKnown RBP17.55■□□□□ 0.4
SCARB2-213ENST00000638680 BLOC1S1P78537 153 aa17.55■□□□□ 0.4
SCARB2-213ENST00000638680 SF3A2Q15428 464 aaKnown RBP17.55■□□□□ 0.4
SCARB2-213ENST00000638680 LRIG1Q96JA1 1093 aa17.55■□□□□ 0.4
SCARB2-213ENST00000638680 MVB12BQ9H7P6 319 aa17.55■□□□□ 0.4
SCARB2-213ENST00000638680 HIF3AQ9Y2N7 669 aa17.55■□□□□ 0.4
SCARB2-213ENST00000638680 LOC285095A0A1B0GVY8 99 aa17.55■□□□□ 0.4
SCARB2-213ENST00000638680 F5H5P2 479 aa17.55■□□□□ 0.4
SCARB2-213ENST00000638680 KCNJ13O60928 360 aa17.55■□□□□ 0.4
SCARB2-213ENST00000638680 ITGAMP11215 1152 aa17.55■□□□□ 0.4
SCARB2-213ENST00000638680 MAGEA3P43357 314 aa17.55■□□□□ 0.4
SCARB2-213ENST00000638680 GRIN2CQ14957 1233 aa17.55■□□□□ 0.4
SCARB2-213ENST00000638680 CPZQ66K79 652 aa17.55■□□□□ 0.4
SCARB2-213ENST00000638680 BORAQ6PGQ7 559 aa17.55■□□□□ 0.4
SCARB2-213ENST00000638680 DPH1Q9BZG8 443 aa17.55■□□□□ 0.4
SCARB2-213ENST00000638680 ANKMY1Q9P2S6 941 aa17.55■□□□□ 0.4
SCARB2-213ENST00000638680 SLC7A11Q9UPY5 501 aa17.55■□□□□ 0.4
SCARB2-213ENST00000638680 AK1P00568 194 aa17.54■□□□□ 0.4
SCARB2-213ENST00000638680 ALDOBP05062 364 aa17.54■□□□□ 0.4
SCARB2-213ENST00000638680 PBX2P40425 430 aa17.54■□□□□ 0.4
SCARB2-213ENST00000638680 METTL2BQ6P1Q9 378 aaKnown RBP17.54■□□□□ 0.4
SCARB2-213ENST00000638680 CRTC1Q6UUV9 634 aa17.54■□□□□ 0.4
SCARB2-213ENST00000638680 CPOQ8IVL8 374 aa17.54■□□□□ 0.4
SCARB2-213ENST00000638680 SLC35F2Q8IXU6 374 aa17.54■□□□□ 0.4
SCARB2-213ENST00000638680 ARFGAP1Q8N6T3 406 aa17.54■□□□□ 0.4
SCARB2-213ENST00000638680 OR51L1Q8NGJ5 315 aa17.54■□□□□ 0.4
SCARB2-213ENST00000638680 C3orf30Q96M34 536 aa17.54■□□□□ 0.4
SCARB2-213ENST00000638680 ZNF300Q96RE9 604 aaPredicted RBP17.54■□□□□ 0.4
SCARB2-213ENST00000638680 RDH14Q9HBH5 336 aa17.54■□□□□ 0.4
SCARB2-213ENST00000638680 TMEM45AQ9NWC5 275 aa17.54■□□□□ 0.4
SCARB2-213ENST00000638680 SLC7A7Q9UM01 511 aa17.54■□□□□ 0.4
SCARB2-213ENST00000638680 A0A1W2PP55 124 aa17.54■□□□□ 0.4
SCARB2-213ENST00000638680 TRAPPC13A5PLN9 417 aa17.54■□□□□ 0.4
SCARB2-213ENST00000638680 AQP2P41181 271 aa17.54■□□□□ 0.4
SCARB2-213ENST00000638680 DHPSP49366 369 aaPredicted RBP17.54■□□□□ 0.4
SCARB2-213ENST00000638680 TP53I3Q53FA7 332 aa17.54■□□□□ 0.4
SCARB2-213ENST00000638680 PXKQ7Z7A4 578 aa17.54■□□□□ 0.4
SCARB2-213ENST00000638680 FAM83CQ9BQN1 747 aa17.54■□□□□ 0.4
SCARB2-213ENST00000638680 PBDC1Q9BVG4 233 aa17.54■□□□□ 0.4
SCARB2-213ENST00000638680 TIMM8BQ9Y5J9 83 aaPredicted RBP17.54■□□□□ 0.4
SCARB2-213ENST00000638680 A0A0U1RQS6 177 aa17.54■□□□□ 0.4
SCARB2-213ENST00000638680 PHYHO14832 338 aa17.54■□□□□ 0.4
SCARB2-213ENST00000638680 POU4F3Q15319 338 aa17.54■□□□□ 0.4
SCARB2-213ENST00000638680 NDUFAF5Q5TEU4 345 aa17.54■□□□□ 0.4
SCARB2-213ENST00000638680 ZNF691Q5VV52 312 aa17.54■□□□□ 0.4
SCARB2-213ENST00000638680 METTL11BQ5VVY1 283 aa17.54■□□□□ 0.4
SCARB2-213ENST00000638680 KLHDC8AQ8IYD2 350 aa17.54■□□□□ 0.4
SCARB2-213ENST00000638680 GPR150Q8NGU9 434 aa17.54■□□□□ 0.4
SCARB2-213ENST00000638680 SORCS1Q8WY21 1168 aa17.54■□□□□ 0.4
SCARB2-213ENST00000638680 SLCO3A1Q9UIG8 710 aa17.54■□□□□ 0.4
SCARB2-213ENST00000638680 MYH10P35580 1976 aa17.54■□□□□ 0.4
SCARB2-213ENST00000638680 MEIOCA2RUB1 952 aa17.54■□□□□ 0.4
SCARB2-213ENST00000638680 FZD9O00144 591 aa17.54■□□□□ 0.4
SCARB2-213ENST00000638680 SLC16A8O95907 504 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms