RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 SLC35A4Q96G79 324 aa17.31■□□□□ 0.36
CLN6-213ENST00000636212 ADOQ96SZ5 270 aa17.31■□□□□ 0.36
CLN6-213ENST00000636212 ZNF559Q9BR84 538 aa17.31■□□□□ 0.36
CLN6-213ENST00000636212 PRDM14Q9GZV8 571 aa17.31■□□□□ 0.36
CLN6-213ENST00000636212 ANKRA2Q9H9E1 313 aa17.31■□□□□ 0.36
CLN6-213ENST00000636212 GALNT9Q9HCQ5 603 aa17.31■□□□□ 0.36
CLN6-213ENST00000636212 NPDC1Q9NQX5 325 aaPredicted RBP17.31■□□□□ 0.36
CLN6-213ENST00000636212 EXO1Q9UQ84 846 aaKnown RBP17.31■□□□□ 0.36
CLN6-213ENST00000636212 NINQ8N4C6 2090 aa17.3■□□□□ 0.36
CLN6-213ENST00000636212 A0A087WV62 115 aa17.3■□□□□ 0.36
CLN6-213ENST00000636212 C2orf72A6NCS6 295 aa17.3■□□□□ 0.36
CLN6-213ENST00000636212 AZIN1O14977 448 aa17.3■□□□□ 0.36
CLN6-213ENST00000636212 TRIM13O60858 407 aa17.3■□□□□ 0.36
CLN6-213ENST00000636212 NEFHP12036 1026 aa17.3■□□□□ 0.36
CLN6-213ENST00000636212 IGFBP2P18065 325 aa17.3■□□□□ 0.36
CLN6-213ENST00000636212 ADH7P40394 386 aa17.3■□□□□ 0.36
CLN6-213ENST00000636212 PEX19P40855 299 aa17.3■□□□□ 0.36
CLN6-213ENST00000636212 PNLIPRP2P54317 469 aa17.3■□□□□ 0.36
CLN6-213ENST00000636212 MYBPHQ13203 477 aa17.3■□□□□ 0.36
CLN6-213ENST00000636212 ACSF3Q4G176 576 aaPredicted RBP17.3■□□□□ 0.36
CLN6-213ENST00000636212 EIPR1Q53HC9 387 aa17.3■□□□□ 0.36
CLN6-213ENST00000636212 CLEC6AQ6EIG7 209 aa17.3■□□□□ 0.36
CLN6-213ENST00000636212 FAM71E1Q6IPT2 247 aa17.3■□□□□ 0.36
CLN6-213ENST00000636212 ENPP6Q6UWR7 440 aa17.3■□□□□ 0.36
CLN6-213ENST00000636212 C10orf107Q8IVU9 208 aa17.3■□□□□ 0.36
CLN6-213ENST00000636212 DMRTC2Q8IXT2 367 aaPredicted RBP17.3■□□□□ 0.36
CLN6-213ENST00000636212 OR7G2Q8NG99 324 aa17.3■□□□□ 0.36
CLN6-213ENST00000636212 APOPT1Q96IL0 206 aa17.3■□□□□ 0.36
CLN6-213ENST00000636212 VSTM2LQ96N03 204 aa17.3■□□□□ 0.36
CLN6-213ENST00000636212 UGT2B28Q9BY64 529 aa17.3■□□□□ 0.36
CLN6-213ENST00000636212 C12orf65Q9H3J6 166 aaKnown RBP17.3■□□□□ 0.36
CLN6-213ENST00000636212 EML4Q9HC35 981 aaKnown RBP17.3■□□□□ 0.36
CLN6-213ENST00000636212 DDX18Q9NVP1 670 aaKnown RBP17.3■□□□□ 0.36
CLN6-213ENST00000636212 C1orf109Q9NX04 203 aa17.3■□□□□ 0.36
CLN6-213ENST00000636212 TAS2R7Q9NYW3 318 aa17.3■□□□□ 0.36
CLN6-213ENST00000636212 KCNN3Q9UGI6 736 aa17.3■□□□□ 0.36
CLN6-213ENST00000636212 MRTO4Q9UKD2 239 aaKnown RBP17.3■□□□□ 0.36
CLN6-213ENST00000636212 FIS1Q9Y3D6 152 aa17.3■□□□□ 0.36
CLN6-213ENST00000636212 EXPH5Q8NEV8 1989 aa17.29■□□□□ 0.36
CLN6-213ENST00000636212 NCKAP5O14513 1909 aa17.29■□□□□ 0.36
CLN6-213ENST00000636212 CT45A8P0DMV1 189 aa17.29■□□□□ 0.36
CLN6-213ENST00000636212 CT45A9P0DMV2 189 aa17.29■□□□□ 0.36
CLN6-213ENST00000636212 BMP7P18075 431 aa17.29■□□□□ 0.36
CLN6-213ENST00000636212 CORO7P57737 925 aa17.29■□□□□ 0.36
CLN6-213ENST00000636212 CT45A2Q5DJT8 189 aa17.29■□□□□ 0.36
CLN6-213ENST00000636212 SH2D4BQ5SQS7 431 aa17.29■□□□□ 0.36
CLN6-213ENST00000636212 DESI1Q6ICB0 168 aa17.29■□□□□ 0.36
CLN6-213ENST00000636212 YRDCQ86U90 279 aaKnown RBP17.29■□□□□ 0.36
CLN6-213ENST00000636212 PLCZ1Q86YW0 608 aa17.29■□□□□ 0.36
CLN6-213ENST00000636212 TRIB1Q96RU8 372 aa17.29■□□□□ 0.36
CLN6-213ENST00000636212 LRTM1Q9HBL6 345 aa17.29■□□□□ 0.36
CLN6-213ENST00000636212 SERHLQ9NQF3 203 aa17.29■□□□□ 0.36
CLN6-213ENST00000636212 MKS1Q9NXB0 559 aa17.29■□□□□ 0.36
CLN6-213ENST00000636212 WIF1Q9Y5W5 379 aa17.29■□□□□ 0.36
CLN6-213ENST00000636212 CREBBPQ92793 2442 aa17.29■□□□□ 0.36
CLN6-213ENST00000636212 NUDT17P0C025 328 aa17.28■□□□□ 0.36
CLN6-213ENST00000636212 CYP4B1P13584 511 aa17.28■□□□□ 0.36
CLN6-213ENST00000636212 DDX5P17844 614 aaKnown RBP17.28■□□□□ 0.36
CLN6-213ENST00000636212 PRPH2P23942 346 aa17.28■□□□□ 0.36
CLN6-213ENST00000636212 TIMP3P35625 211 aa17.28■□□□□ 0.36
CLN6-213ENST00000636212 PTGDSP41222 190 aa17.28■□□□□ 0.36
CLN6-213ENST00000636212 MC3RP41968 323 aa17.28■□□□□ 0.36
CLN6-213ENST00000636212 CLK3P49761 638 aaKnown RBP17.28■□□□□ 0.36
CLN6-213ENST00000636212 PCLAFQ15004 111 aa17.28■□□□□ 0.36
CLN6-213ENST00000636212 NSUN5P2Q63ZY6 315 aa17.28■□□□□ 0.36
CLN6-213ENST00000636212 TMEM107Q6UX40 140 aa17.28■□□□□ 0.36
CLN6-213ENST00000636212 IFNEQ86WN2 208 aa17.28■□□□□ 0.36
CLN6-213ENST00000636212 OR2W6PQ8NHA6 318 aa17.28■□□□□ 0.36
CLN6-213ENST00000636212 ZFP28Q8NHY6 868 aa17.28■□□□□ 0.36
CLN6-213ENST00000636212 NTNG2Q96CW9 530 aa17.28■□□□□ 0.36
CLN6-213ENST00000636212 GATA5Q9BWX5 397 aaPredicted RBP17.28■□□□□ 0.36
CLN6-213ENST00000636212 ANKZF1Q9H8Y5 726 aa17.28■□□□□ 0.36
CLN6-213ENST00000636212 C3orf14Q9HBI5 128 aa17.28■□□□□ 0.36
CLN6-213ENST00000636212 Q9N2J8 555 aa17.28■□□□□ 0.36
CLN6-213ENST00000636212 SDHAF3Q9NRP4 125 aa17.28■□□□□ 0.36
CLN6-213ENST00000636212 DKKL1Q9UK85 242 aa17.28■□□□□ 0.36
CLN6-213ENST00000636212 C19orf53Q9UNZ5 99 aaPredicted RBP17.28■□□□□ 0.36
CLN6-213ENST00000636212 PLOD2O00469 737 aa17.27■□□□□ 0.36
CLN6-213ENST00000636212 TSPAN2O60636 221 aa17.27■□□□□ 0.36
CLN6-213ENST00000636212 BMP5P22003 454 aa17.27■□□□□ 0.36
CLN6-213ENST00000636212 SRD5A2P31213 254 aa17.27■□□□□ 0.36
CLN6-213ENST00000636212 GPC1P35052 558 aa17.27■□□□□ 0.36
CLN6-213ENST00000636212 PSMD4P55036 377 aaKnown RBP17.27■□□□□ 0.36
CLN6-213ENST00000636212 DECR1Q16698 335 aa17.27■□□□□ 0.36
CLN6-213ENST00000636212 CYP27C1Q4G0S4 372 aa17.27■□□□□ 0.36
CLN6-213ENST00000636212 AAGABQ6PD74 315 aa17.27■□□□□ 0.36
CLN6-213ENST00000636212 NPSR1Q6W5P4 371 aa17.27■□□□□ 0.36
CLN6-213ENST00000636212 LIX1LQ8IVB5 337 aa17.27■□□□□ 0.36
CLN6-213ENST00000636212 WDSUB1Q8N9V3 476 aa17.27■□□□□ 0.36
CLN6-213ENST00000636212 TNIP2Q8NFZ5 429 aa17.27■□□□□ 0.36
CLN6-213ENST00000636212 OR4K17Q8NGC6 315 aa17.27■□□□□ 0.36
CLN6-213ENST00000636212 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.27■□□□□ 0.36
CLN6-213ENST00000636212 EFHD2Q96C19 240 aaPredicted RBP17.27■□□□□ 0.36
CLN6-213ENST00000636212 WDYHV1Q96HA8 205 aa17.27■□□□□ 0.36
CLN6-213ENST00000636212 AMDHD1Q96NU7 426 aa17.27■□□□□ 0.36
CLN6-213ENST00000636212 CCT7Q99832 543 aa17.27■□□□□ 0.36
CLN6-213ENST00000636212 ROPN1BQ9BZX4 212 aaPredicted RBP17.27■□□□□ 0.36
CLN6-213ENST00000636212 OR2B2Q9GZK3 357 aa17.27■□□□□ 0.36
CLN6-213ENST00000636212 GLIPR2Q9H4G4 154 aa17.27■□□□□ 0.36
CLN6-213ENST00000636212 CALHM2Q9HA72 323 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms