RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 CHCHD2Q9Y6H1 151 aaPredicted RBP14.25□□□□□ -0.13
CLN6-211ENST00000635754 NUP214P35658 2090 aaPredicted RBP14.25□□□□□ -0.13
CLN6-211ENST00000635754 SHANK1Q9Y566 2161 aa14.25□□□□□ -0.13
CLN6-211ENST00000635754 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.24□□□□□ -0.13
CLN6-211ENST00000635754 ASPDHA6ND91 283 aa14.24□□□□□ -0.13
CLN6-211ENST00000635754 SCN2BO60939 215 aa14.24□□□□□ -0.13
CLN6-211ENST00000635754 CNR1P21554 472 aa14.24□□□□□ -0.13
CLN6-211ENST00000635754 IL12BP29460 328 aa14.24□□□□□ -0.13
CLN6-211ENST00000635754 PRIM2P49643 509 aa14.24□□□□□ -0.13
CLN6-211ENST00000635754 MEOX1P50221 254 aa14.24□□□□□ -0.13
CLN6-211ENST00000635754 POLR2JP52435 117 aaKnown RBP14.24□□□□□ -0.13
CLN6-211ENST00000635754 GPR85P60893 370 aa14.24□□□□□ -0.13
CLN6-211ENST00000635754 PHC1P78364 1004 aa14.24□□□□□ -0.13
CLN6-211ENST00000635754 CYP27C1Q4G0S4 372 aa14.24□□□□□ -0.13
CLN6-211ENST00000635754 MFSD12Q6NUT3 480 aa14.24□□□□□ -0.13
CLN6-211ENST00000635754 ZCCHC12Q6PEW1 402 aa14.24□□□□□ -0.13
CLN6-211ENST00000635754 PAOXQ6QHF9 649 aa14.24□□□□□ -0.13
CLN6-211ENST00000635754 GK5Q6ZS86 529 aa14.24□□□□□ -0.13
CLN6-211ENST00000635754 WDR53Q7Z5U6 358 aaPredicted RBP14.24□□□□□ -0.13
CLN6-211ENST00000635754 FBXW8Q8N3Y1 598 aa14.24□□□□□ -0.13
CLN6-211ENST00000635754 CPSF7Q8N684 471 aaKnown RBP14.24□□□□□ -0.13
CLN6-211ENST00000635754 POGLUT1Q8NBL1 392 aa14.24□□□□□ -0.13
CLN6-211ENST00000635754 FAR1Q8WVX9 515 aa14.24□□□□□ -0.13
CLN6-211ENST00000635754 SLC9A6Q92581 669 aa14.24□□□□□ -0.13
CLN6-211ENST00000635754 TMBIM1Q969X1 311 aa14.24□□□□□ -0.13
CLN6-211ENST00000635754 GIMAP5Q96F15 307 aa14.24□□□□□ -0.13
CLN6-211ENST00000635754 FRMD6Q96NE9 622 aa14.24□□□□□ -0.13
CLN6-211ENST00000635754 SECISBP2Q96T21 854 aaKnown RBP14.24□□□□□ -0.13
CLN6-211ENST00000635754 SH2D2AQ9NP31 389 aa14.24□□□□□ -0.13
CLN6-211ENST00000635754 OLAHQ9NV23 265 aa14.24□□□□□ -0.13
CLN6-211ENST00000635754 BTNL2Q9UIR0 455 aa14.24□□□□□ -0.13
CLN6-211ENST00000635754 MRTO4Q9UKD2 239 aaKnown RBP14.24□□□□□ -0.13
CLN6-211ENST00000635754 TRIM33Q9UPN9 1127 aa14.24□□□□□ -0.13
CLN6-211ENST00000635754 FAM234BA2RU67 622 aa14.24□□□□□ -0.13
CLN6-211ENST00000635754 REM1O75628 298 aa14.24□□□□□ -0.13
CLN6-211ENST00000635754 CPSF4O95639 269 aaKnown RBP14.24□□□□□ -0.13
CLN6-211ENST00000635754 HMGN2P05204 90 aaKnown RBP14.24□□□□□ -0.13
CLN6-211ENST00000635754 KRT16P08779 473 aa14.24□□□□□ -0.13
CLN6-211ENST00000635754 PLA2G2AP14555 144 aa14.24□□□□□ -0.13
CLN6-211ENST00000635754 NCF2P19878 526 aaPredicted RBP14.24□□□□□ -0.13
CLN6-211ENST00000635754 GABRA3P34903 492 aa14.24□□□□□ -0.13
CLN6-211ENST00000635754 ATP4BP51164 291 aa14.24□□□□□ -0.13
CLN6-211ENST00000635754 PRAMEF20Q5VT98 475 aa14.24□□□□□ -0.13
CLN6-211ENST00000635754 NUP54Q7Z3B4 507 aa14.24□□□□□ -0.13
CLN6-211ENST00000635754 OR9I1Q8NGQ6 314 aa14.24□□□□□ -0.13
CLN6-211ENST00000635754 OR5AK3PQ8NH89 298 aa14.24□□□□□ -0.13
CLN6-211ENST00000635754 FBXO30Q8TB52 745 aa14.24□□□□□ -0.13
CLN6-211ENST00000635754 GPR151Q8TDV0 419 aa14.24□□□□□ -0.13
CLN6-211ENST00000635754 JADE3Q92613 823 aa14.24□□□□□ -0.13
CLN6-211ENST00000635754 DIO2Q92813 273 aa14.24□□□□□ -0.13
CLN6-211ENST00000635754 MIB2Q96AX9 1013 aa14.24□□□□□ -0.13
CLN6-211ENST00000635754 CHMP6Q96FZ7 201 aa14.24□□□□□ -0.13
CLN6-211ENST00000635754 CCDC115Q96NT0 180 aa14.24□□□□□ -0.13
CLN6-211ENST00000635754 COL21A1Q96P44 957 aa14.24□□□□□ -0.13
CLN6-211ENST00000635754 PANX1Q96RD7 426 aa14.24□□□□□ -0.13
CLN6-211ENST00000635754 BARD1Q99728 777 aaKnown RBP14.24□□□□□ -0.13
CLN6-211ENST00000635754 FAM173AQ9BQD7 235 aa14.24□□□□□ -0.13
CLN6-211ENST00000635754 TMEM120AQ9BXJ8 343 aa14.24□□□□□ -0.13
CLN6-211ENST00000635754 DEPPQ9NTK1 212 aa14.24□□□□□ -0.13
CLN6-211ENST00000635754 CBLCQ9ULV8 474 aa14.24□□□□□ -0.13
CLN6-211ENST00000635754 SPENQ96T58 3664 aaKnown RBP14.23□□□□□ -0.13
CLN6-211ENST00000635754 RNF103-CHMP3A0A140T963 221 aa14.23□□□□□ -0.13
CLN6-211ENST00000635754 OR6C70A6NIJ9 312 aa14.23□□□□□ -0.13
CLN6-211ENST00000635754 G3V3Y1 287 aa14.23□□□□□ -0.13
CLN6-211ENST00000635754 NKX2-2O95096 273 aa14.23□□□□□ -0.13
CLN6-211ENST00000635754 KCNH1O95259 989 aa14.23□□□□□ -0.13
CLN6-211ENST00000635754 ALOX5P09917 674 aa14.23□□□□□ -0.13
CLN6-211ENST00000635754 ACP2P11117 423 aa14.23□□□□□ -0.13
CLN6-211ENST00000635754 ZNF24P17028 368 aa14.23□□□□□ -0.13
CLN6-211ENST00000635754 PIGAP37287 484 aa14.23□□□□□ -0.13
CLN6-211ENST00000635754 ZFP36L2P47974 494 aaKnown RBP14.23□□□□□ -0.13
CLN6-211ENST00000635754 PSMD4P55036 377 aaKnown RBP14.23□□□□□ -0.13
CLN6-211ENST00000635754 KCNJ2P63252 427 aa14.23□□□□□ -0.13
CLN6-211ENST00000635754 MRPS22P82650 360 aaKnown RBP14.23□□□□□ -0.13
CLN6-211ENST00000635754 FOXK1P85037 733 aa14.23□□□□□ -0.13
CLN6-211ENST00000635754 ALDH6A1Q02252 535 aaKnown RBP14.23□□□□□ -0.13
CLN6-211ENST00000635754 GAB1Q13480 694 aa14.23□□□□□ -0.13
CLN6-211ENST00000635754 EFR3AQ14156 821 aa14.23□□□□□ -0.13
CLN6-211ENST00000635754 SQLEQ14534 574 aa14.23□□□□□ -0.13
CLN6-211ENST00000635754 LASP1Q14847 261 aaKnown RBP14.23□□□□□ -0.13
CLN6-211ENST00000635754 DECR1Q16698 335 aa14.23□□□□□ -0.13
CLN6-211ENST00000635754 TBCELQ5QJ74 424 aa14.23□□□□□ -0.13
CLN6-211ENST00000635754 CGB2Q6NT52 195 aa14.23□□□□□ -0.13
CLN6-211ENST00000635754 ATCAYQ86WG3 371 aa14.23□□□□□ -0.13
CLN6-211ENST00000635754 TRIML2Q8N7C3 387 aa14.23□□□□□ -0.13
CLN6-211ENST00000635754 ZFP62Q8NB50 900 aaPredicted RBP14.23□□□□□ -0.13
CLN6-211ENST00000635754 OR2M7Q8NG81 312 aa14.23□□□□□ -0.13
CLN6-211ENST00000635754 OR4N2Q8NGD1 307 aa14.23□□□□□ -0.13
CLN6-211ENST00000635754 SPPL2AQ8TCT8 520 aa14.23□□□□□ -0.13
CLN6-211ENST00000635754 NR4A3Q92570 626 aa14.23□□□□□ -0.13
CLN6-211ENST00000635754 HOXB13Q92826 284 aaPredicted RBP14.23□□□□□ -0.13
CLN6-211ENST00000635754 SLC35A4Q96G79 324 aa14.23□□□□□ -0.13
CLN6-211ENST00000635754 ZNF317Q96PQ6 595 aaPredicted RBP14.23□□□□□ -0.13
CLN6-211ENST00000635754 ADOQ96SZ5 270 aa14.23□□□□□ -0.13
CLN6-211ENST00000635754 YIPF4Q9BSR8 244 aa14.23□□□□□ -0.13
CLN6-211ENST00000635754 ACTRT3Q9BYD9 372 aa14.23□□□□□ -0.13
CLN6-211ENST00000635754 RABEP2Q9H5N1 569 aa14.23□□□□□ -0.13
CLN6-211ENST00000635754 RMND5AQ9H871 391 aa14.23□□□□□ -0.13
CLN6-211ENST00000635754 CNOT11Q9UKZ1 510 aaKnown RBP14.23□□□□□ -0.13
CLN6-211ENST00000635754 VPS4AQ9UN37 437 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms