RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 PLD3Q8IV08 490 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 MMD2Q8IY49 270 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 KLHDC8AQ8IYD2 350 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 LGI2Q8N0V4 545 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 SFRP1Q8N474 314 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 CSGALNACT2Q8N6G5 542 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 FAM184AQ8NB25 1140 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 NOA1Q8NC60 698 aaKnown RBP2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 KIAA0895Q8NCT3 520 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 OR11H4Q8NGC9 324 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 WFDC5Q8TCV5 224 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 GRHL3Q8TE85 626 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 PHLDA1Q8WV24 401 aaPredicted RBP2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 RTP4Q96DX8 246 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 SCRN2Q96FV2 425 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 EEF2KMTQ96G04 330 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 SMARCD1Q96GM5 515 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 GDAP1L1Q96MZ0 367 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 TMEM237Q96Q45 408 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 ACCSQ96QU6 501 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 PANX3Q96QZ0 392 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 GAL3ST4Q96RP7 486 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 USP28Q96RU2 1077 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 KCNK16Q96T55 309 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 TUBA1CQ9BQE3 449 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 SPXQ9BT56 116 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 TRAF4Q9BUZ4 470 aaPredicted RBP2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 NUSAP1Q9BXS6 441 aaKnown RBP2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 EGLN1Q9GZT9 426 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 UBQLN3Q9H347 655 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 FAM124BQ9H5Z6 455 aaPredicted RBP2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 PRORYQ9H606 182 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 PELI2Q9HAT8 420 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 NMUR1Q9HB89 426 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 DMAP1Q9NPF5 467 aaPredicted RBP2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 DNAJC11Q9NVH1 559 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 ANO10Q9NW15 660 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 MALT1Q9UDY8 824 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 CLEC4EQ9ULY5 219 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 SLC7A7Q9UM01 511 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 EXOC7Q9UPT5 735 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 SCML2Q9UQR0 700 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 ITM2BQ9Y287 266 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 HBS1LQ9Y450 684 aaKnown RBP2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 KLK4Q9Y5K2 254 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 SHROOM3Q8TF72 1996 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 DNHD1Q96M86 4753 aa2.23□□□□□ -2.05
SMARCB1-208ENST00000634926 IGLV5-45A0A087WSX0 123 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 A0A0A6YYC8 382 aaPredicted RBP2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 LOC101059948A0A1B0GTJ6 334 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 A0A1B0GTQ1 180 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 A0A1W2PNU3 283 aaPredicted RBP2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 SLC9B1P1A6NJY1 282 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 ZNF233A6NK53 670 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 C2orf81A6NN90 581 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 WASH3PC4AMC7 463 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 PRSS46E5RG02 174 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 NEDD8-MDP1E9PL57 170 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 NPIPA3F8WFD2 350 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 I3L1I5 382 aaPredicted RBP2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 MAPK13O15264 365 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 LATO43561 262 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 XPNPEP2O43895 674 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 PRKRAO75569 313 aaKnown RBP2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 BCAS2O75934 225 aaPredicted RBP2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 YEATS4O95619 227 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 IGLV3-25P01717 112 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 SERPING1P05155 500 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 PTMAP06454 111 aaKnown RBP2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 GIMD1P0DJR0 217 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 MBL2P11226 248 aaPredicted RBP2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 FGF5P12034 268 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 CCDC130P13994 396 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 IL10P22301 178 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 HLA-FP30511 346 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 DRD3P35462 400 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 OR3A1P47881 315 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 NR2C2P49116 596 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 RPL34P49207 117 aaKnown RBP2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 CASP4P49662 377 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 SGSHP51688 502 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 UCP2P55851 309 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 MAZP56270 477 aaKnown RBP2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 B3GALT5-AS1P59052 145 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 IL1RL1Q01638 556 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 GFPT1Q06210 699 aaPredicted RBP2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 IL10RBQ08334 325 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 LGALS3BPQ08380 585 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 EIF4EBP2Q13542 120 aaPredicted RBP2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 ZRSR1Q15695 479 aaKnown RBP2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 HLA-BQ31612 363 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 ZNF699Q32M78 642 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 ZNF672Q499Z4 452 aaPredicted RBP2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 SIRPB2Q5JXA9 342 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 PRAMEF8Q5VWM4 474 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 FAM46CQ5VWP2 391 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 KCTD11Q693B1 232 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 PM20D1Q6GTS8 502 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 ETFRF1Q6IPR1 90 aa2.22□□□□□ -2.05
SMARCB1-208ENST00000634926 FAM173BQ6P4H8 233 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms