RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 IGLV3-21P80748 117 aaPredicted RBP8.86□□□□□ -0.99
PDLIM5-223ENST00000627587 TXNL4AP83876 142 aaKnown RBP8.86□□□□□ -0.99
PDLIM5-223ENST00000627587 VLDLRP98155 873 aa8.86□□□□□ -0.99
PDLIM5-223ENST00000627587 ACY1Q03154 408 aa8.86□□□□□ -0.99
PDLIM5-223ENST00000627587 SLC13A2Q13183 592 aa8.86□□□□□ -0.99
PDLIM5-223ENST00000627587 ELOAQ14241 798 aaKnown RBP8.86□□□□□ -0.99
PDLIM5-223ENST00000627587 ERV3-1Q14264 604 aa8.86□□□□□ -0.99
PDLIM5-223ENST00000627587 LASP1Q14847 261 aaKnown RBP8.86□□□□□ -0.99
PDLIM5-223ENST00000627587 TAF11Q15544 211 aa8.86□□□□□ -0.99
PDLIM5-223ENST00000627587 SYPL1Q16563 259 aa8.86□□□□□ -0.99
PDLIM5-223ENST00000627587 PRICKLE4Q2TBC4 344 aa8.86□□□□□ -0.99
PDLIM5-223ENST00000627587 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.86□□□□□ -0.99
PDLIM5-223ENST00000627587 TRMT12Q53H54 448 aaKnown RBP8.86□□□□□ -0.99
PDLIM5-223ENST00000627587 CRB2Q5IJ48 1285 aa8.86□□□□□ -0.99
PDLIM5-223ENST00000627587 RPS26P11Q5JNZ5 115 aaPredicted RBP8.86□□□□□ -0.99
PDLIM5-223ENST00000627587 REEP3Q6NUK4 255 aa8.86□□□□□ -0.99
PDLIM5-223ENST00000627587 OLIG3Q7RTU3 272 aa8.86□□□□□ -0.99
PDLIM5-223ENST00000627587 SLITRK4Q8IW52 837 aa8.86□□□□□ -0.99
PDLIM5-223ENST00000627587 ZNF595Q8IYB9 648 aa8.86□□□□□ -0.99
PDLIM5-223ENST00000627587 OR2L13Q8N349 312 aa8.86□□□□□ -0.99
PDLIM5-223ENST00000627587 METTL25Q8N6Q8 603 aa8.86□□□□□ -0.99
PDLIM5-223ENST00000627587 RCBTB1Q8NDN9 531 aa8.86□□□□□ -0.99
PDLIM5-223ENST00000627587 CTHRC1Q96CG8 243 aa8.86□□□□□ -0.99
PDLIM5-223ENST00000627587 C7orf34Q96L11 122 aa8.86□□□□□ -0.99
PDLIM5-223ENST00000627587 YIPF4Q9BSR8 244 aa8.86□□□□□ -0.99
PDLIM5-223ENST00000627587 COQ10BQ9H8M1 238 aa8.86□□□□□ -0.99
PDLIM5-223ENST00000627587 VNN3Q9NY84 501 aa8.86□□□□□ -0.99
PDLIM5-223ENST00000627587 PTGFRNQ9P2B2 879 aa8.86□□□□□ -0.99
PDLIM5-223ENST00000627587 P2RX2Q9UBL9 471 aa8.86□□□□□ -0.99
PDLIM5-223ENST00000627587 DHCR7Q9UBM7 475 aaKnown RBP8.86□□□□□ -0.99
PDLIM5-223ENST00000627587 NDOR1Q9UHB4 597 aa8.86□□□□□ -0.99
PDLIM5-223ENST00000627587 ZNF639Q9UID6 485 aa8.86□□□□□ -0.99
PDLIM5-223ENST00000627587 TUBD1Q9UJT1 453 aa8.86□□□□□ -0.99
PDLIM5-223ENST00000627587 CDC14AQ9UNH5 594 aa8.86□□□□□ -0.99
PDLIM5-223ENST00000627587 ZNF451Q9Y4E5 1061 aa8.86□□□□□ -0.99
PDLIM5-223ENST00000627587 C7orf72A4D263 438 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 C9orf172C9J069 976 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 PDLIM1O00151 329 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 CLOCKO15516 846 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 JRKO75564 520 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 CDC123O75794 336 aaPredicted RBP8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 SLC35E2P0CK97 266 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 NT5EP21589 574 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 ALAS2P22557 587 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 IST1P53990 364 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 BTG2P78543 158 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 STX4Q12846 297 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 DUSP8Q13202 625 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 CYBRD1Q53TN4 286 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 PHF19Q5T6S3 580 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 YOD1Q5VVQ6 348 aaPredicted RBP8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 TBPL2Q6SJ96 375 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 FKBP9P1Q75LS8 142 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 WDR53Q7Z5U6 358 aaPredicted RBP8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 PATL1Q86TB9 770 aaKnown RBP8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 SLC44A2Q8IWA5 706 aaPredicted RBP8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 OR51Q1Q8NH59 317 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 APOBEC4Q8WW27 367 aaKnown RBP8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 XAGE5Q8WWM1 108 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 LZICQ8WZA0 190 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 TMEM19Q96HH6 336 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 TPD52L3Q96J77 140 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 HSH2DQ96JZ2 352 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 MS4A4EQ96PG1 132 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 IL1RAPQ9NPH3 570 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 PRTFDC1Q9NRG1 225 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 LANCL2Q9NS86 450 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 SIDT1Q9NXL6 827 aaKnown RBP8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 MAT2BQ9NZL9 334 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 OAZ3Q9UMX2 235 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 ABCG2Q9UNQ0 655 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 MAU2Q9Y6X3 613 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 A0A087WV62 115 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 SAC3D1A6NKF1 404 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 M0QX08 132 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 ASNA1O43681 348 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 OR10H2O60403 315 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 CTNSO60931 367 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 PDE9AO76083 593 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 PGM3O95394 542 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 TIAF1O95411 115 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 CST1P01037 141 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 CHRM4P08173 479 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 IFI6P09912 130 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 ACADSP16219 412 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 ITIH1P19827 911 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 TNFRSF1BP20333 461 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 ATP6V1C1P21283 382 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 S1PR1P21453 382 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 ETV5P41161 510 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 MAP3K8P41279 467 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 XCR1P46094 333 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 OR1D4P47884 311 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 CLCN2P51788 898 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 SELENOWP63302 87 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 GNA13Q14344 377 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 CMPK2Q5EBM0 449 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 MFSD12Q6NUT3 480 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 BORAQ6PGQ7 559 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 ZBTB49Q6ZSB9 765 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms