RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 A0A087WZY1 265 aa3.22□□□□□ -1.89
CDR1-202ENST00000625883 TTC26A0AVF1 554 aa3.22□□□□□ -1.89
CDR1-202ENST00000625883 MFSD2BA6NFX1 497 aa3.22□□□□□ -1.89
CDR1-202ENST00000625883 NPIPA2E9PIF3 369 aa3.22□□□□□ -1.89
CDR1-202ENST00000625883 PHF1O43189 567 aaPredicted RBP3.22□□□□□ -1.89
CDR1-202ENST00000625883 NUDT14O95848 222 aa3.22□□□□□ -1.89
CDR1-202ENST00000625883 ANXA4P09525 319 aaPredicted RBP3.22□□□□□ -1.89
CDR1-202ENST00000625883 BCL3P20749 454 aa3.22□□□□□ -1.89
CDR1-202ENST00000625883 PAICSP22234 425 aaKnown RBP3.22□□□□□ -1.89
CDR1-202ENST00000625883 CYP2F1P24903 491 aa3.22□□□□□ -1.89
CDR1-202ENST00000625883 HPDP32754 393 aaPredicted RBP3.22□□□□□ -1.89
CDR1-202ENST00000625883 MDH1P40925 334 aaKnown RBP3.22□□□□□ -1.89
CDR1-202ENST00000625883 ZFP36L1Q07352 338 aaKnown RBP3.22□□□□□ -1.89
CDR1-202ENST00000625883 BNIP1Q12981 228 aa3.22□□□□□ -1.89
CDR1-202ENST00000625883 EXOSC2Q13868 293 aaKnown RBP3.22□□□□□ -1.89
CDR1-202ENST00000625883 CDKN3Q16667 212 aa3.22□□□□□ -1.89
CDR1-202ENST00000625883 PRR5LQ6MZQ0 368 aa3.22□□□□□ -1.89
CDR1-202ENST00000625883 SLC39A4Q6P5W5 647 aa3.22□□□□□ -1.89
CDR1-202ENST00000625883 TSEN54Q7Z6J9 526 aaKnown RBP3.22□□□□□ -1.89
CDR1-202ENST00000625883 GTSCR1Q86UQ5 136 aa3.22□□□□□ -1.89
CDR1-202ENST00000625883 VPS36Q86VN1 386 aa3.22□□□□□ -1.89
CDR1-202ENST00000625883 TEX9Q8N6V9 391 aa3.22□□□□□ -1.89
CDR1-202ENST00000625883 FNDC8Q8TC99 324 aa3.22□□□□□ -1.89
CDR1-202ENST00000625883 C11orf24Q96F05 449 aaPredicted RBP3.22□□□□□ -1.89
CDR1-202ENST00000625883 TESK2Q96S53 571 aa3.22□□□□□ -1.89
CDR1-202ENST00000625883 FICDQ9BVA6 458 aa3.22□□□□□ -1.89
CDR1-202ENST00000625883 TRIM9Q9C026 710 aa3.22□□□□□ -1.89
CDR1-202ENST00000625883 DPH5Q9H2P9 285 aa3.22□□□□□ -1.89
CDR1-202ENST00000625883 COQ10BQ9H8M1 238 aa3.22□□□□□ -1.89
CDR1-202ENST00000625883 DCAF13Q9NV06 445 aaKnown RBP3.22□□□□□ -1.89
CDR1-202ENST00000625883 EPS15L1Q9UBC2 864 aa3.22□□□□□ -1.89
CDR1-202ENST00000625883 GHRLQ9UBU3 117 aa3.22□□□□□ -1.89
CDR1-202ENST00000625883 A0A1B0GUL7 405 aa3.21□□□□□ -1.9
CDR1-202ENST00000625883 ZNF487B1APH4 448 aa3.21□□□□□ -1.9
CDR1-202ENST00000625883 CLDN3O15551 220 aa3.21□□□□□ -1.9
CDR1-202ENST00000625883 TYROBPO43914 113 aa3.21□□□□□ -1.9
CDR1-202ENST00000625883 GUCA1CO95843 209 aa3.21□□□□□ -1.9
CDR1-202ENST00000625883 HEXBP07686 556 aa3.21□□□□□ -1.9
CDR1-202ENST00000625883 GATA1P15976 413 aaPredicted RBP3.21□□□□□ -1.9
CDR1-202ENST00000625883 DESP17661 470 aa3.21□□□□□ -1.9
CDR1-202ENST00000625883 DPP4P27487 766 aa3.21□□□□□ -1.9
CDR1-202ENST00000625883 ACAA2P42765 397 aaKnown RBP3.21□□□□□ -1.9
CDR1-202ENST00000625883 PTGFRP43088 359 aa3.21□□□□□ -1.9
CDR1-202ENST00000625883 TRPC1P48995 793 aa3.21□□□□□ -1.9
CDR1-202ENST00000625883 ARHGDIAP52565 204 aa3.21□□□□□ -1.9
CDR1-202ENST00000625883 KRTAP10-7P60409 375 aaPredicted RBP3.21□□□□□ -1.9
CDR1-202ENST00000625883 TFDP1Q14186 410 aa3.21□□□□□ -1.9
CDR1-202ENST00000625883 ABRAXAS2Q15018 415 aa3.21□□□□□ -1.9
CDR1-202ENST00000625883 LTB4RQ15722 352 aa3.21□□□□□ -1.9
CDR1-202ENST00000625883 MS4A13Q5J8X5 152 aa3.21□□□□□ -1.9
CDR1-202ENST00000625883 BEND6Q5SZJ8 279 aaPredicted RBP3.21□□□□□ -1.9
CDR1-202ENST00000625883 ZNF772Q68DY9 489 aaPredicted RBP3.21□□□□□ -1.9
CDR1-202ENST00000625883 CCBE1Q6UXH8 406 aaPredicted RBP3.21□□□□□ -1.9
CDR1-202ENST00000625883 LPCAT2Q7L5N7 544 aa3.21□□□□□ -1.9
CDR1-202ENST00000625883 LHFPL4Q7Z7J7 247 aa3.21□□□□□ -1.9
CDR1-202ENST00000625883 ARL14Q8N4G2 192 aa3.21□□□□□ -1.9
CDR1-202ENST00000625883 ZNF671Q8TAW3 534 aa3.21□□□□□ -1.9
CDR1-202ENST00000625883 DNAJA3Q96EY1 480 aa3.21□□□□□ -1.9
CDR1-202ENST00000625883 PIWIL1Q96J94 861 aaKnown RBP3.21□□□□□ -1.9
CDR1-202ENST00000625883 TSGA13Q96PP4 275 aa3.21□□□□□ -1.9
CDR1-202ENST00000625883 CARD6Q9BX69 1037 aa3.21□□□□□ -1.9
CDR1-202ENST00000625883 MRPL13Q9BYD1 178 aaKnown RBP3.21□□□□□ -1.9
CDR1-202ENST00000625883 ZBP1Q9H171 429 aa3.21□□□□□ -1.9
CDR1-202ENST00000625883 RPAP3Q9H6T3 665 aaPredicted RBP3.21□□□□□ -1.9
CDR1-202ENST00000625883 DUS2Q9NX74 493 aaKnown RBP3.21□□□□□ -1.9
CDR1-202ENST00000625883 KLRF1Q9NZS2 232 aa3.21□□□□□ -1.9
CDR1-202ENST00000625883 DHRS4-AS1Q9P1J3 65 aa3.21□□□□□ -1.9
CDR1-202ENST00000625883 ARMCX1Q9P291 453 aa3.21□□□□□ -1.9
CDR1-202ENST00000625883 ATP6V1HQ9UI12 483 aa3.21□□□□□ -1.9
CDR1-202ENST00000625883 DHRS7Q9Y394 339 aa3.21□□□□□ -1.9
CDR1-202ENST00000625883 ATP6V0A2Q9Y487 856 aa3.21□□□□□ -1.9
CDR1-202ENST00000625883 SDHDO14521 159 aa3.2□□□□□ -1.9
CDR1-202ENST00000625883 LRRTM2O43300 516 aa3.2□□□□□ -1.9
CDR1-202ENST00000625883 ZNF253O75346 499 aa3.2□□□□□ -1.9
CDR1-202ENST00000625883 OR4F21O95013 312 aa3.2□□□□□ -1.9
CDR1-202ENST00000625883 TBX6O95947 436 aaPredicted RBP3.2□□□□□ -1.9
CDR1-202ENST00000625883 KRT6BP04259 564 aa3.2□□□□□ -1.9
CDR1-202ENST00000625883 GATA2P23769 480 aaPredicted RBP3.2□□□□□ -1.9
CDR1-202ENST00000625883 IGFBP5P24593 272 aa3.2□□□□□ -1.9
CDR1-202ENST00000625883 CYLC1P35663 651 aaPredicted RBP3.2□□□□□ -1.9
CDR1-202ENST00000625883 HMGCLP35914 325 aa3.2□□□□□ -1.9
CDR1-202ENST00000625883 ELK3P41970 407 aa3.2□□□□□ -1.9
CDR1-202ENST00000625883 KRT6CP48668 564 aa3.2□□□□□ -1.9
CDR1-202ENST00000625883 STK19P49842 368 aaPredicted RBP3.2□□□□□ -1.9
CDR1-202ENST00000625883 TRA2BP62995 288 aaKnown RBP3.2□□□□□ -1.9
CDR1-202ENST00000625883 EIF2B1Q14232 305 aaKnown RBP3.2□□□□□ -1.9
CDR1-202ENST00000625883 ZIC1Q15915 447 aa3.2□□□□□ -1.9
CDR1-202ENST00000625883 TCTEX1D4Q5JR98 221 aa3.2□□□□□ -1.9
CDR1-202ENST00000625883 NIPAL3Q6P499 406 aa3.2□□□□□ -1.9
CDR1-202ENST00000625883 AFTPHQ6ULP2 937 aa3.2□□□□□ -1.9
CDR1-202ENST00000625883 Q7L0L9 218 aa3.2□□□□□ -1.9
CDR1-202ENST00000625883 CBWD2Q8IUF1 395 aa3.2□□□□□ -1.9
CDR1-202ENST00000625883 EFCAB13Q8IY85 973 aa3.2□□□□□ -1.9
CDR1-202ENST00000625883 GCNT2Q8N0V5 402 aa3.2□□□□□ -1.9
CDR1-202ENST00000625883 GIPC3Q8TF64 312 aa3.2□□□□□ -1.9
CDR1-202ENST00000625883 ART4Q93070 314 aa3.2□□□□□ -1.9
CDR1-202ENST00000625883 TOMM40LQ969M1 308 aa3.2□□□□□ -1.9
CDR1-202ENST00000625883 RBM18Q96H35 190 aaKnown RBP3.2□□□□□ -1.9
CDR1-202ENST00000625883 VSTM2LQ96N03 204 aa3.2□□□□□ -1.9
CDR1-202ENST00000625883 PSMB7Q99436 277 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms