RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 CDC40O60508 579 aaKnown RBP eCLIP6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 PLOD3O60568 738 aa6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 REM1O75628 298 aa6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 NEURL1O76050 574 aa6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 C6orf47O95873 294 aa6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 CBX7O95931 251 aa6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 VIMP08670 466 aaKnown RBP6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 TROVE2P10155 538 aaKnown RBP eCLIP6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 LAMP1P11279 417 aa6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 S100A3P33764 101 aa6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 RFC3P40938 356 aa6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 KIR3DL1P43629 444 aa6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 PRIM2P49643 509 aa6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 MEOX1P50221 254 aa6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 CDK9P50750 372 aaKnown RBP6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 DIO3P55073 304 aa6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 CLDN8P56748 225 aa6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 DCAF7P61962 342 aa6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 MRPS22P82650 360 aaKnown RBP6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 RBPJQ06330 500 aa6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 TP53BP2Q13625 1128 aa6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 PDE7AQ13946 482 aa6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 TOMM20Q15388 145 aa6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 IGFBP7Q16270 282 aa6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 DPY19L1Q2PZI1 675 aa6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 VPS26BQ4G0F5 336 aa6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 PIGGQ5H8A4 983 aa6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 PRAMEF20Q5VT98 475 aa6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 SLC22A10Q63ZE4 541 aa6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 OGFOD2Q6N063 350 aa6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 RPUSD3Q6P087 351 aaKnown RBP6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 ANGPTL8Q6UXH0 198 aa6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 GFRALQ6UXV0 394 aa6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 LRRC34Q8IZ02 419 aa6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 ARMC10Q8N2F6 343 aa6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 ZNF615Q8N8J6 731 aa6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 GOLM1Q8NBJ4 401 aa6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 C17orf47Q8NEP4 570 aa6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 OR4A15Q8NGL6 344 aa6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 CEP70Q8NHQ1 597 aa6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 FBXO30Q8TB52 745 aa6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 CKAP2Q8WWK9 683 aa6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 SLC9A6Q92581 669 aa6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 DIO2Q92813 273 aa6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 OMA1Q96E52 524 aa6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 ELP4Q96EB1 424 aa6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 HSPBAP1Q96EW2 488 aa6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 THOC1Q96FV9 657 aaKnown RBP6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 ZNF764Q96H86 408 aaPredicted RBP6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 SGCZQ96LD1 299 aa6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 MS4A4EQ96PG1 132 aa6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 FAM173AQ9BQD7 235 aa6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 DOHHQ9BU89 302 aa6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 BHLHE41Q9C0J9 482 aaPredicted RBP6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 NXF5Q9H1B4 397 aaKnown RBP6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 EXO5Q9H790 373 aa6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 FOLH1BQ9HBA9 442 aa6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 Q9N2J8 555 aa6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 NPHS2Q9NP85 383 aa6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 TCF7L2Q9NQB0 619 aa6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 ACSS1Q9NUB1 689 aaPredicted RBP6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 ASIC5Q9NY37 505 aa6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 KLRF1Q9NZS2 232 aa6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 CNIH4Q9P003 139 aa6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 B4GALT7Q9UBV7 327 aa6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 ATP6V1HQ9UI12 483 aa6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 MRTO4Q9UKD2 239 aaKnown RBP6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 BOKQ9UMX3 212 aaPredicted RBP6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 FAF1Q9UNN5 650 aaPredicted RBP6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 EXO1Q9UQ84 846 aaKnown RBP6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 NPFFR2Q9Y5X5 522 aa6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 DMXL2Q8TDJ6 3036 aa6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 ANKRD11Q6UB99 2663 aaPredicted RBP6.66□□□□□ -1.34
NPLOC4-221ENST00000625705 KMT2BQ9UMN6 2715 aaPredicted RBP6.65□□□□□ -1.34
NPLOC4-221ENST00000625705 ANKUB1A6NFN9 424 aa6.65□□□□□ -1.34
NPLOC4-221ENST00000625705 TMEM200CA6NKL6 621 aa6.65□□□□□ -1.34
NPLOC4-221ENST00000625705 FAM166BA8MTA8 275 aa6.65□□□□□ -1.34
NPLOC4-221ENST00000625705 NPIPA5E9PKD4 350 aa6.65□□□□□ -1.34
NPLOC4-221ENST00000625705 PLOD2O00469 737 aa6.65□□□□□ -1.34
NPLOC4-221ENST00000625705 EMC8O43402 210 aa6.65□□□□□ -1.34
NPLOC4-221ENST00000625705 TBX19O60806 448 aa6.65□□□□□ -1.34
NPLOC4-221ENST00000625705 NME6O75414 186 aaPredicted RBP6.65□□□□□ -1.34
NPLOC4-221ENST00000625705 KCNH1O95259 989 aa6.65□□□□□ -1.34
NPLOC4-221ENST00000625705 ANP32DO95626 131 aa6.65□□□□□ -1.34
NPLOC4-221ENST00000625705 CPSF4O95639 269 aaKnown RBP6.65□□□□□ -1.34
NPLOC4-221ENST00000625705 CLPSP04118 112 aa6.65□□□□□ -1.34
NPLOC4-221ENST00000625705 KRT16P08779 473 aa6.65□□□□□ -1.34
NPLOC4-221ENST00000625705 ALOX5P09917 674 aa6.65□□□□□ -1.34
NPLOC4-221ENST00000625705 CCL3P10147 92 aa6.65□□□□□ -1.34
NPLOC4-221ENST00000625705 DRD5P21918 477 aa6.65□□□□□ -1.34
NPLOC4-221ENST00000625705 ABCD3P28288 659 aa6.65□□□□□ -1.34
NPLOC4-221ENST00000625705 CHI3L1P36222 383 aaPredicted RBP6.65□□□□□ -1.34
NPLOC4-221ENST00000625705 PPICP45877 212 aa6.65□□□□□ -1.34
NPLOC4-221ENST00000625705 DNASE1L1P49184 302 aa6.65□□□□□ -1.34
NPLOC4-221ENST00000625705 EMDP50402 254 aa6.65□□□□□ -1.34
NPLOC4-221ENST00000625705 PSMD4P55036 377 aaKnown RBP6.65□□□□□ -1.34
NPLOC4-221ENST00000625705 AQP5P55064 265 aa6.65□□□□□ -1.34
NPLOC4-221ENST00000625705 CASP6P55212 293 aa6.65□□□□□ -1.34
NPLOC4-221ENST00000625705 CORO7P57737 925 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms