RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 SLC13A2Q13183 592 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 FLYWCH1Q4VC44 716 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 KLHL22Q53GT1 634 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 SPANXN2Q5MJ10 180 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 C9orf50Q5SZB4 431 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 ANKRD54Q6NXT1 300 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 SLC27A4Q6P1M0 643 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 OR2L13Q8N349 312 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 CLIP4Q8N3C7 705 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 GANCQ8TET4 914 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 LCN9Q8WX39 176 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 PIK3R3Q92569 461 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 SLC22A18Q96BI1 424 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 ZG16BQ96DA0 208 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 WDFY2Q96P53 400 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 MS4A4EQ96PG1 132 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 RPP25Q9BUL9 199 aaKnown RBP8.84□□□□□ -0.99
PDPN-212ENST00000621990 POLR2J2Q9GZM3 115 aaKnown RBP8.84□□□□□ -0.99
PDPN-212ENST00000621990 NUAK2Q9H093 628 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 SLC6A17Q9H1V8 727 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 ISYNA1Q9NPH2 558 aa8.84□□□□□ -0.99
PDPN-212ENST00000621990 ZNF624Q9P2J8 865 aaPredicted RBP8.84□□□□□ -0.99
PDPN-212ENST00000621990 POM121BA6NF01 834 aa8.83□□□□□ -1
PDPN-212ENST00000621990 DUXAA6NLW8 204 aa8.83□□□□□ -1
PDPN-212ENST00000621990 BTN3A3O00478 584 aa8.83□□□□□ -1
PDPN-212ENST00000621990 STK25O00506 426 aa8.83□□□□□ -1
PDPN-212ENST00000621990 MYL12BO14950 172 aa8.83□□□□□ -1
PDPN-212ENST00000621990 AGR2O95994 175 aa8.83□□□□□ -1
PDPN-212ENST00000621990 ZNF888P0CJ79 500 aaPredicted RBP8.83□□□□□ -1
PDPN-212ENST00000621990 MAT2AP31153 395 aaKnown RBP8.83□□□□□ -1
PDPN-212ENST00000621990 ETV5P41161 510 aa8.83□□□□□ -1
PDPN-212ENST00000621990 ETV1P50549 477 aa8.83□□□□□ -1
PDPN-212ENST00000621990 ST3GAL3Q11203 375 aa8.83□□□□□ -1
PDPN-212ENST00000621990 KRR1Q13601 381 aaKnown RBP8.83□□□□□ -1
PDPN-212ENST00000621990 NFATC4Q14934 902 aa8.83□□□□□ -1
PDPN-212ENST00000621990 KIR2DS3Q14952 304 aa8.83□□□□□ -1
PDPN-212ENST00000621990 DECR1Q16698 335 aa8.83□□□□□ -1
PDPN-212ENST00000621990 MINDY4Q4G0A6 757 aa8.83□□□□□ -1
PDPN-212ENST00000621990 EXOSC6Q5RKV6 272 aaKnown RBP8.83□□□□□ -1
PDPN-212ENST00000621990 MFSD12Q6NUT3 480 aa8.83□□□□□ -1
PDPN-212ENST00000621990 PAQR6Q6TCH4 344 aa8.83□□□□□ -1
PDPN-212ENST00000621990 SLC36A4Q6YBV0 504 aa8.83□□□□□ -1
PDPN-212ENST00000621990 HMGN2P46Q86SG4 172 aa8.83□□□□□ -1
PDPN-212ENST00000621990 ASPGQ86U10 573 aa8.83□□□□□ -1
PDPN-212ENST00000621990 VRK2Q86Y07 508 aa8.83□□□□□ -1
PDPN-212ENST00000621990 SAMD14Q8IZD0 417 aaPredicted RBP8.83□□□□□ -1
PDPN-212ENST00000621990 KCT2Q8NC54 265 aa8.83□□□□□ -1
PDPN-212ENST00000621990 OR4E2Q8NGC2 313 aa8.83□□□□□ -1
PDPN-212ENST00000621990 OR8D4Q8NGM9 314 aa8.83□□□□□ -1
PDPN-212ENST00000621990 CHAC2Q8WUX2 184 aa8.83□□□□□ -1
PDPN-212ENST00000621990 OR1E3Q8WZA6 343 aa8.83□□□□□ -1
PDPN-212ENST00000621990 SLC35A4Q96G79 324 aa8.83□□□□□ -1
PDPN-212ENST00000621990 TXNDC15Q96J42 360 aa8.83□□□□□ -1
PDPN-212ENST00000621990 SLC30A2Q9BRI3 323 aa8.83□□□□□ -1
PDPN-212ENST00000621990 CNPPD1Q9BV87 410 aa8.83□□□□□ -1
PDPN-212ENST00000621990 EGLN3Q9H6Z9 239 aa8.83□□□□□ -1
PDPN-212ENST00000621990 SMURF1Q9HCE7 757 aa8.83□□□□□ -1
PDPN-212ENST00000621990 SEMA4GQ9NTN9 838 aa8.83□□□□□ -1
PDPN-212ENST00000621990 MOSPD1Q9UJG1 213 aa8.83□□□□□ -1
PDPN-212ENST00000621990 TBC1D3DA0A087WVF3 549 aa8.83□□□□□ -1
PDPN-212ENST00000621990 TBC1D3IA0A087WXS9 549 aa8.83□□□□□ -1
PDPN-212ENST00000621990 TBC1D3EA0A087X179 549 aa8.83□□□□□ -1
PDPN-212ENST00000621990 TBC1D3KA0A087X1G2 549 aa8.83□□□□□ -1
PDPN-212ENST00000621990 IQCMA0A1B0GVH7 501 aa8.83□□□□□ -1
PDPN-212ENST00000621990 TBC1D3FA6NER0 549 aaPredicted RBP8.83□□□□□ -1
PDPN-212ENST00000621990 TBC1D3LB9A6J9 549 aa8.83□□□□□ -1
PDPN-212ENST00000621990 LRP4O75096 1905 aa8.83□□□□□ -1
PDPN-212ENST00000621990 COL4A2P08572 1712 aa8.83□□□□□ -1
PDPN-212ENST00000621990 TBC1D3HP0C7X1 549 aa8.83□□□□□ -1
PDPN-212ENST00000621990 COL9A1P20849 921 aa8.83□□□□□ -1
PDPN-212ENST00000621990 FPR3P25089 353 aa8.83□□□□□ -1
PDPN-212ENST00000621990 TRHRP34981 398 aaPredicted RBP8.83□□□□□ -1
PDPN-212ENST00000621990 SNRPNP63162 240 aaKnown RBP8.83□□□□□ -1
PDPN-212ENST00000621990 RGS1Q08116 209 aa8.83□□□□□ -1
PDPN-212ENST00000621990 LTB4RQ15722 352 aa8.83□□□□□ -1
PDPN-212ENST00000621990 FAM214AQ32MH5 1076 aa8.83□□□□□ -1
PDPN-212ENST00000621990 ATAD3BQ5T9A4 648 aa8.83□□□□□ -1
PDPN-212ENST00000621990 TBC1D3GQ6DHY5 549 aa8.83□□□□□ -1
PDPN-212ENST00000621990 TBC1D3CQ6IPX1 549 aa8.83□□□□□ -1
PDPN-212ENST00000621990 CDC73Q6P1J9 531 aa8.83□□□□□ -1
PDPN-212ENST00000621990 FBXO42Q6P3S6 717 aa8.83□□□□□ -1
PDPN-212ENST00000621990 FAM111BQ6SJ93 734 aa8.83□□□□□ -1
PDPN-212ENST00000621990 USP30Q70CQ3 517 aa8.83□□□□□ -1
PDPN-212ENST00000621990 PRICKLE2Q7Z3G6 844 aa8.83□□□□□ -1
PDPN-212ENST00000621990 TBC1D3Q8IZP1 549 aaPredicted RBP8.83□□□□□ -1
PDPN-212ENST00000621990 CACTIN-AS1Q8N1I8 211 aa8.83□□□□□ -1
PDPN-212ENST00000621990 LRRC25Q8N386 305 aaPredicted RBP8.83□□□□□ -1
PDPN-212ENST00000621990 ZNF485Q8NCK3 441 aa8.83□□□□□ -1
PDPN-212ENST00000621990 TOR1AIP2Q8NFQ8 470 aa8.83□□□□□ -1
PDPN-212ENST00000621990 OR7G2Q8NG99 324 aa8.83□□□□□ -1
PDPN-212ENST00000621990 TEX47Q8TBZ9 253 aa8.83□□□□□ -1
PDPN-212ENST00000621990 OR2A5Q96R48 311 aa8.83□□□□□ -1
PDPN-212ENST00000621990 SAP130Q9H0E3 1048 aa8.83□□□□□ -1
PDPN-212ENST00000621990 KLHL3Q9UH77 587 aa8.83□□□□□ -1
PDPN-212ENST00000621990 PHF11Q9UIL8 331 aa8.83□□□□□ -1
PDPN-212ENST00000621990 DNAH14Q0VDD8 3507 aa8.83□□□□□ -1
PDPN-212ENST00000621990 FAM170BA6NMN3 283 aa8.82□□□□□ -1
PDPN-212ENST00000621990 SNTNA6NMZ2 147 aa8.82□□□□□ -1
PDPN-212ENST00000621990 CTDSP2O14595 271 aa8.82□□□□□ -1
PDPN-212ENST00000621990 SLC31A1O15431 190 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms