RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-223ENST00000620507 CXXC5Q7LFL8 322 aaKnown RBP8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 SHFQ7M4L6 423 aa8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 VRK2Q86Y07 508 aa8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 GALNT12Q8IXK2 581 aa8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 ANKK1Q8NFD2 765 aa8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 OR2A1Q8NGT9 310 aa8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 DYNC2LI1Q8TCX1 351 aa8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 SFXN5Q8TD22 340 aa8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 TP53INP1Q96A56 240 aa8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 PHF21AQ96BD5 680 aa8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 DEPDC7Q96QD5 511 aa8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 CDCA3Q99618 268 aaPredicted RBP8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 GPC6Q9Y625 555 aaPredicted RBP8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 WASHC1A8K0Z3 465 aa8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 IDH3BO43837 385 aa8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 FUCA1P04066 466 aa8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 VSX2P58304 361 aaPredicted RBP8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 LGALS3BPQ08380 585 aa8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 ZNF542PQ5EBM4 170 aa8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 PRPF38BQ5VTL8 546 aaKnown RBP8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 CCBE1Q6UXH8 406 aaPredicted RBP8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 WASH2PQ6VEQ5 465 aa8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 RNF44Q7L0R7 432 aa8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 KIAA0907Q7Z7F0 614 aaPredicted RBP8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 ZFP41Q8N8Y5 198 aa8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 ZNF784Q8NCA9 323 aaPredicted RBP8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 PROKR2Q8NFJ6 384 aa8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 MS4A4EQ96PG1 132 aa8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 TRNT1Q96Q11 434 aaKnown RBP8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 NELL2Q99435 816 aa8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 SAP130Q9H0E3 1048 aa8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 SLC6A17Q9H1V8 727 aa8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 RSPH9Q9H1X1 276 aaPredicted RBP8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 POLMQ9NP87 494 aaPredicted RBP8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 ZNF221Q9UK13 617 aa8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 CA5BQ9Y2D0 317 aa8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 CMAHPQ9Y471 501 aa8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 PCNTO95613 3336 aa8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 TRIM64A6NGJ6 449 aa8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 B4DGG1 531 aa8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 GTPBP1O00178 669 aaKnown RBP8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 NDUFV2P19404 249 aa8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 HNRNPA2B1P22626 353 aaKnown RBP8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 PKLRP30613 574 aa8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 GABRA3P34903 492 aa8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 OPRD1P41143 372 aa8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 EIF2DP41214 584 aaKnown RBP8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 SOWAHCQ53LP3 525 aaPredicted RBP8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 AGBL4Q5VU57 503 aa8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 FIGNL1Q6PIW4 674 aa8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 RTL4Q6ZR62 310 aa8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 SPRED2Q7Z698 418 aa8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 MS4A6EQ96DS6 147 aa8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 NKX2-4Q9H2Z4 354 aa8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 FBRSQ9HAH7 460 aa8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 CPNE5Q9HCH3 593 aa8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 ZNF226Q9NYT6 803 aa8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 SCML1Q9UN30 329 aa8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 DOCK6Q96HP0 2047 aa8.67□□□□□ -1.02
RBFOX1-223ENST00000620507 A0A1W2PR48 441 aa8.66□□□□□ -1.02
RBFOX1-223ENST00000620507 ZAR1LA6NP61 321 aa8.66□□□□□ -1.02
RBFOX1-223ENST00000620507 PRR23D1E9PI22 279 aaPredicted RBP8.66□□□□□ -1.02
RBFOX1-223ENST00000620507 CTDSP2O14595 271 aa8.66□□□□□ -1.02
RBFOX1-223ENST00000620507 PRODHO43272 600 aa8.66□□□□□ -1.02
RBFOX1-223ENST00000620507 PRR23D2P0DMB1 279 aaPredicted RBP8.66□□□□□ -1.02
RBFOX1-223ENST00000620507 GNSP15586 552 aa8.66□□□□□ -1.02
RBFOX1-223ENST00000620507 CBLP22681 906 aa8.66□□□□□ -1.02
RBFOX1-223ENST00000620507 WNT4P56705 351 aa8.66□□□□□ -1.02
RBFOX1-223ENST00000620507 POU6F2P78424 691 aaPredicted RBP8.66□□□□□ -1.02
RBFOX1-223ENST00000620507 LCN1P1Q5VSP4 162 aa8.66□□□□□ -1.02
RBFOX1-223ENST00000620507 ZNF544Q6NX49 715 aa8.66□□□□□ -1.02
RBFOX1-223ENST00000620507 PGBD2Q6P3X8 592 aa8.66□□□□□ -1.02
RBFOX1-223ENST00000620507 BCDIN3DQ7Z5W3 292 aaKnown RBP8.66□□□□□ -1.02
RBFOX1-223ENST00000620507 SLC41A3Q96GZ6 507 aa8.66□□□□□ -1.02
RBFOX1-223ENST00000620507 NRTNQ99748 197 aa8.66□□□□□ -1.02
RBFOX1-223ENST00000620507 ZFYVE21Q9BQ24 234 aa8.66□□□□□ -1.02
RBFOX1-223ENST00000620507 MROQ9BYG7 248 aa8.66□□□□□ -1.02
RBFOX1-223ENST00000620507 RBCK1Q9BYM8 510 aa8.66□□□□□ -1.02
RBFOX1-223ENST00000620507 FGF22Q9HCT0 170 aa8.66□□□□□ -1.02
RBFOX1-223ENST00000620507 PIAS3Q9Y6X2 628 aa8.66□□□□□ -1.02
RBFOX1-223ENST00000620507 OTOL1A6NHN0 477 aaPredicted RBP8.66□□□□□ -1.02
RBFOX1-223ENST00000620507 A8MVJ9 347 aa8.66□□□□□ -1.02
RBFOX1-223ENST00000620507 IGFBP1P08833 259 aaPredicted RBP8.66□□□□□ -1.02
RBFOX1-223ENST00000620507 UGT2B10P36537 528 aa8.66□□□□□ -1.02
RBFOX1-223ENST00000620507 VASPP50552 380 aaPredicted RBP8.66□□□□□ -1.02
RBFOX1-223ENST00000620507 RHAGQ02094 409 aa8.66□□□□□ -1.02
RBFOX1-223ENST00000620507 KIR2DS3Q14952 304 aa8.66□□□□□ -1.02
RBFOX1-223ENST00000620507 SLX4IPQ5VYV7 408 aa8.66□□□□□ -1.02
RBFOX1-223ENST00000620507 SLC48A1Q6P1K1 146 aa8.66□□□□□ -1.02
RBFOX1-223ENST00000620507 MFSD9Q8NBP5 474 aa8.66□□□□□ -1.02
RBFOX1-223ENST00000620507 CDS1Q92903 461 aa8.66□□□□□ -1.02
RBFOX1-223ENST00000620507 SERINC2Q96SA4 455 aa8.66□□□□□ -1.02
RBFOX1-223ENST00000620507 PRR14Q9BWN1 585 aa8.66□□□□□ -1.02
RBFOX1-223ENST00000620507 TEX101Q9BY14 249 aa8.66□□□□□ -1.02
RBFOX1-223ENST00000620507 EGLN3Q9H6Z9 239 aa8.66□□□□□ -1.02
RBFOX1-223ENST00000620507 SYNDIG1Q9H7V2 258 aa8.66□□□□□ -1.02
RBFOX1-223ENST00000620507 SPHK1Q9NYA1 384 aa8.66□□□□□ -1.02
RBFOX1-223ENST00000620507 STMN3Q9NZ72 180 aa8.66□□□□□ -1.02
RBFOX1-223ENST00000620507 CCDC59Q9P031 241 aaKnown RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms