RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 KAT2AQ92830 837 aa13.74□□□□□ -0.21
UBXN1-218ENST00000616865 CMTM5Q96DZ9 223 aa13.74□□□□□ -0.21
UBXN1-218ENST00000616865 SCMH1Q96GD3 660 aa13.74□□□□□ -0.21
UBXN1-218ENST00000616865 FRMD6Q96NE9 622 aa13.74□□□□□ -0.21
UBXN1-218ENST00000616865 PANX1Q96RD7 426 aa13.74□□□□□ -0.21
UBXN1-218ENST00000616865 NPAS2Q99743 824 aa13.74□□□□□ -0.21
UBXN1-218ENST00000616865 CCDC106Q9BWC9 280 aa13.74□□□□□ -0.21
UBXN1-218ENST00000616865 HES7Q9BYE0 225 aa13.74□□□□□ -0.21
UBXN1-218ENST00000616865 MYLK2Q9H1R3 596 aa13.74□□□□□ -0.21
UBXN1-218ENST00000616865 CXorf21Q9HAI6 301 aa13.74□□□□□ -0.21
UBXN1-218ENST00000616865 NEUROD4Q9HD90 331 aa13.74□□□□□ -0.21
UBXN1-218ENST00000616865 KLHL1Q9NR64 748 aa13.74□□□□□ -0.21
UBXN1-218ENST00000616865 DDX18Q9NVP1 670 aaKnown RBP13.74□□□□□ -0.21
UBXN1-218ENST00000616865 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.74□□□□□ -0.21
UBXN1-218ENST00000616865 BCAP29Q9UHQ4 241 aa13.74□□□□□ -0.21
UBXN1-218ENST00000616865 BTNL2Q9UIR0 455 aa13.74□□□□□ -0.21
UBXN1-218ENST00000616865 ITGB1BP2Q9UKP3 347 aa13.74□□□□□ -0.21
UBXN1-218ENST00000616865 ERVK-19Q9WJR5 959 aa13.74□□□□□ -0.21
UBXN1-218ENST00000616865 MEMO1Q9Y316 297 aa13.74□□□□□ -0.21
UBXN1-218ENST00000616865 NDUFAF1Q9Y375 327 aa13.74□□□□□ -0.21
UBXN1-218ENST00000616865 CLDN16Q9Y5I7 305 aa13.74□□□□□ -0.21
UBXN1-218ENST00000616865 LOC100653049A0A140TA62 436 aa13.73□□□□□ -0.21
UBXN1-218ENST00000616865 A0A1W2PP18 115 aa13.73□□□□□ -0.21
UBXN1-218ENST00000616865 BBIP1A8MTZ0 92 aa13.73□□□□□ -0.21
UBXN1-218ENST00000616865 RFXANKO14593 260 aa13.73□□□□□ -0.21
UBXN1-218ENST00000616865 BCAS2O75934 225 aaPredicted RBP13.73□□□□□ -0.21
UBXN1-218ENST00000616865 KRT34O76011 436 aa13.73□□□□□ -0.21
UBXN1-218ENST00000616865 COX4I1P13073 169 aa13.73□□□□□ -0.21
UBXN1-218ENST00000616865 CAPN3P20807 821 aa13.73□□□□□ -0.21
UBXN1-218ENST00000616865 SSTR2P30874 369 aa13.73□□□□□ -0.21
UBXN1-218ENST00000616865 FRKP42685 505 aaPredicted RBP13.73□□□□□ -0.21
UBXN1-218ENST00000616865 WNT3P56703 355 aa13.73□□□□□ -0.21
UBXN1-218ENST00000616865 PHC1P78364 1004 aa13.73□□□□□ -0.21
UBXN1-218ENST00000616865 ALDH6A1Q02252 535 aaKnown RBP13.73□□□□□ -0.21
UBXN1-218ENST00000616865 MAP4K2Q12851 820 aa13.73□□□□□ -0.21
UBXN1-218ENST00000616865 MLC1Q15049 377 aa13.73□□□□□ -0.21
UBXN1-218ENST00000616865 OR1C1Q15619 314 aa13.73□□□□□ -0.21
UBXN1-218ENST00000616865 MEP1AQ16819 746 aa13.73□□□□□ -0.21
UBXN1-218ENST00000616865 SPRED3Q2MJR0 410 aa13.73□□□□□ -0.21
UBXN1-218ENST00000616865 KRTCAP3Q53RY4 240 aa13.73□□□□□ -0.21
UBXN1-218ENST00000616865 FAM111BQ6SJ93 734 aa13.73□□□□□ -0.21
UBXN1-218ENST00000616865 SPPL2CQ8IUH8 684 aa13.73□□□□□ -0.21
UBXN1-218ENST00000616865 TRIML2Q8N7C3 387 aa13.73□□□□□ -0.21
UBXN1-218ENST00000616865 POU5F2Q8N7G0 328 aa13.73□□□□□ -0.21
UBXN1-218ENST00000616865 TMEM178AQ8NBL3 297 aa13.73□□□□□ -0.21
UBXN1-218ENST00000616865 RP9Q8TA86 221 aaKnown RBP13.73□□□□□ -0.21
UBXN1-218ENST00000616865 SLC2A12Q8TD20 617 aa13.73□□□□□ -0.21
UBXN1-218ENST00000616865 ZNF675Q8TD23 568 aa13.73□□□□□ -0.21
UBXN1-218ENST00000616865 PTPMT1Q8WUK0 201 aaPredicted RBP13.73□□□□□ -0.21
UBXN1-218ENST00000616865 FBXL20Q96IG2 436 aa13.73□□□□□ -0.21
UBXN1-218ENST00000616865 CCDC115Q96NT0 180 aa13.73□□□□□ -0.21
UBXN1-218ENST00000616865 UTP23Q9BRU9 249 aaKnown RBP13.73□□□□□ -0.21
UBXN1-218ENST00000616865 TSPAN10Q9H1Z9 355 aaPredicted RBP13.73□□□□□ -0.21
UBXN1-218ENST00000616865 MMP25Q9NPA2 562 aa13.73□□□□□ -0.21
UBXN1-218ENST00000616865 ANKRD10Q9NXR5 420 aa13.73□□□□□ -0.21
UBXN1-218ENST00000616865 TAS2R9Q9NYW1 312 aa13.73□□□□□ -0.21
UBXN1-218ENST00000616865 MAT2BQ9NZL9 334 aa13.73□□□□□ -0.21
UBXN1-218ENST00000616865 CACNA1CQ13936 2221 aa13.73□□□□□ -0.21
UBXN1-218ENST00000616865 C2CD3Q4AC94 2353 aa13.73□□□□□ -0.21
UBXN1-218ENST00000616865 EMC8O43402 210 aa13.72□□□□□ -0.21
UBXN1-218ENST00000616865 COQ9O75208 318 aa13.72□□□□□ -0.21
UBXN1-218ENST00000616865 CD46P15529 392 aa13.72□□□□□ -0.21
UBXN1-218ENST00000616865 PRDX6P30041 224 aa13.72□□□□□ -0.21
UBXN1-218ENST00000616865 CHI3L1P36222 383 aaPredicted RBP13.72□□□□□ -0.21
UBXN1-218ENST00000616865 CD96P40200 585 aa13.72□□□□□ -0.21
UBXN1-218ENST00000616865 MC3RP41968 323 aa13.72□□□□□ -0.21
UBXN1-218ENST00000616865 ZFP36L2P47974 494 aaKnown RBP13.72□□□□□ -0.21
UBXN1-218ENST00000616865 TRPC1P48995 793 aa13.72□□□□□ -0.21
UBXN1-218ENST00000616865 CDK9P50750 372 aaKnown RBP13.72□□□□□ -0.21
UBXN1-218ENST00000616865 PRKAG1P54619 331 aa13.72□□□□□ -0.21
UBXN1-218ENST00000616865 SLC26A5P58743 744 aa13.72□□□□□ -0.21
UBXN1-218ENST00000616865 MRPS35P82673 323 aaKnown RBP13.72□□□□□ -0.21
UBXN1-218ENST00000616865 PRR5P85299 388 aa13.72□□□□□ -0.21
UBXN1-218ENST00000616865 PRICKLE4Q2TBC4 344 aa13.72□□□□□ -0.21
UBXN1-218ENST00000616865 ZNF628Q5EBL2 1059 aa13.72□□□□□ -0.21
UBXN1-218ENST00000616865 SLC2A7Q6PXP3 512 aa13.72□□□□□ -0.21
UBXN1-218ENST00000616865 RNF111Q6ZNA4 994 aa13.72□□□□□ -0.21
UBXN1-218ENST00000616865 DGAT2L6Q6ZPD8 337 aa13.72□□□□□ -0.21
UBXN1-218ENST00000616865 ZNF621Q6ZSS3 439 aa13.72□□□□□ -0.21
UBXN1-218ENST00000616865 SIAH3Q8IW03 269 aa13.72□□□□□ -0.21
UBXN1-218ENST00000616865 PCYOX1LQ8NBM8 494 aa13.72□□□□□ -0.21
UBXN1-218ENST00000616865 B3GNT7Q8NFL0 401 aa13.72□□□□□ -0.21
UBXN1-218ENST00000616865 OR7G1Q8NGA0 311 aa13.72□□□□□ -0.21
UBXN1-218ENST00000616865 M1APQ8TC57 530 aa13.72□□□□□ -0.21
UBXN1-218ENST00000616865 NCLNQ969V3 563 aa13.72□□□□□ -0.21
UBXN1-218ENST00000616865 ELP4Q96EB1 424 aa13.72□□□□□ -0.21
UBXN1-218ENST00000616865 VMP1Q96GC9 406 aa13.72□□□□□ -0.21
UBXN1-218ENST00000616865 SENP5Q96HI0 755 aaPredicted RBP13.72□□□□□ -0.21
UBXN1-218ENST00000616865 TACC2O95359 2948 aa13.72□□□□□ -0.21
UBXN1-218ENST00000616865 NPIPA5E9PKD4 350 aa13.71□□□□□ -0.21
UBXN1-218ENST00000616865 MRASO14807 208 aa13.71□□□□□ -0.21
UBXN1-218ENST00000616865 MAN1A2O60476 641 aa13.71□□□□□ -0.21
UBXN1-218ENST00000616865 KCNH1O95259 989 aa13.71□□□□□ -0.21
UBXN1-218ENST00000616865 GSNP06396 782 aa13.71□□□□□ -0.21
UBXN1-218ENST00000616865 CT62P0C5K7 136 aa13.71□□□□□ -0.21
UBXN1-218ENST00000616865 SSTR4P31391 388 aa13.71□□□□□ -0.21
UBXN1-218ENST00000616865 CCT3P49368 545 aaKnown RBP13.71□□□□□ -0.21
UBXN1-218ENST00000616865 ST13P50502 369 aaKnown RBP13.71□□□□□ -0.21
UBXN1-218ENST00000616865 CLCN2P51788 898 aa13.71□□□□□ -0.21
UBXN1-218ENST00000616865 KRTAP10-9P60411 292 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms