RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 PRDM7Q9NQW5 492 aa13.06□□□□□ -0.32
CACNA1C-231ENST00000616390 SNTG1Q9NSN8 517 aa13.06□□□□□ -0.32
CACNA1C-231ENST00000616390 APOBEC3BQ9UH17 382 aaKnown RBP13.06□□□□□ -0.32
CACNA1C-231ENST00000616390 SPTBP11277 2137 aa13.06□□□□□ -0.32
CACNA1C-231ENST00000616390 C5AR1P21730 350 aa13.06□□□□□ -0.32
CACNA1C-231ENST00000616390 PEBP1P30086 187 aaKnown RBP13.06□□□□□ -0.32
CACNA1C-231ENST00000616390 SOX6P35712 828 aa13.06□□□□□ -0.32
CACNA1C-231ENST00000616390 IGFALSP35858 605 aa13.06□□□□□ -0.32
CACNA1C-231ENST00000616390 TAS2R41P59536 307 aa13.06□□□□□ -0.32
CACNA1C-231ENST00000616390 POLR2GP62487 172 aaKnown RBP eCLIP13.06□□□□□ -0.32
CACNA1C-231ENST00000616390 CHRNEQ04844 493 aa13.06□□□□□ -0.32
CACNA1C-231ENST00000616390 ZNF91Q05481 1191 aa13.06□□□□□ -0.32
CACNA1C-231ENST00000616390 DBPQ10586 325 aaPredicted RBP13.06□□□□□ -0.32
CACNA1C-231ENST00000616390 SNAPC1Q16533 368 aa13.06□□□□□ -0.32
CACNA1C-231ENST00000616390 ABHD17CQ6PCB6 329 aa13.06□□□□□ -0.32
CACNA1C-231ENST00000616390 SUN3Q8TAQ9 357 aa13.06□□□□□ -0.32
CACNA1C-231ENST00000616390 TMEM80Q96HE8 168 aa13.06□□□□□ -0.32
CACNA1C-231ENST00000616390 SERINC2Q96SA4 455 aa13.06□□□□□ -0.32
CACNA1C-231ENST00000616390 CDCA4Q9BXL8 241 aa13.06□□□□□ -0.32
CACNA1C-231ENST00000616390 PLA2G12AQ9BZM1 189 aa13.06□□□□□ -0.32
CACNA1C-231ENST00000616390 NEK6Q9HC98 313 aa13.06□□□□□ -0.32
CACNA1C-231ENST00000616390 FGF22Q9HCT0 170 aa13.06□□□□□ -0.32
CACNA1C-231ENST00000616390 TDRD6O60522 2096 aaKnown RBP13.06□□□□□ -0.32
CACNA1C-231ENST00000616390 DSPPQ9NZW4 1301 aa13.05□□□□□ -0.32
CACNA1C-231ENST00000616390 SNTNA6NMZ2 147 aa13.05□□□□□ -0.32
CACNA1C-231ENST00000616390 DRD2P14416 443 aa13.05□□□□□ -0.32
CACNA1C-231ENST00000616390 PKLRP30613 574 aa13.05□□□□□ -0.32
CACNA1C-231ENST00000616390 SERPINB1P30740 379 aa13.05□□□□□ -0.32
CACNA1C-231ENST00000616390 KHKP50053 298 aa13.05□□□□□ -0.32
CACNA1C-231ENST00000616390 RPS21P63220 83 aaKnown RBP13.05□□□□□ -0.32
CACNA1C-231ENST00000616390 SPHARQ15513 63 aa13.05□□□□□ -0.32
CACNA1C-231ENST00000616390 RPE65Q16518 533 aa13.05□□□□□ -0.32
CACNA1C-231ENST00000616390 ZNF311Q5JNZ3 666 aa13.05□□□□□ -0.32
CACNA1C-231ENST00000616390 ENPP7Q6UWV6 458 aa13.05□□□□□ -0.32
CACNA1C-231ENST00000616390 GATAD2AQ86YP4 633 aa13.05□□□□□ -0.32
CACNA1C-231ENST00000616390 TMEFF1Q8IYR6 380 aa13.05□□□□□ -0.32
CACNA1C-231ENST00000616390 NUP43Q8NFH3 380 aa13.05□□□□□ -0.32
CACNA1C-231ENST00000616390 OR2L8Q8NGY9 312 aa13.05□□□□□ -0.32
CACNA1C-231ENST00000616390 C9orf43Q8TAL5 461 aaPredicted RBP13.05□□□□□ -0.32
CACNA1C-231ENST00000616390 RASSF5Q8WWW0 418 aa13.05□□□□□ -0.32
CACNA1C-231ENST00000616390 SLC9A6Q92581 669 aa13.05□□□□□ -0.32
CACNA1C-231ENST00000616390 TSACCQ96A04 125 aaPredicted RBP13.05□□□□□ -0.32
CACNA1C-231ENST00000616390 OTULINQ96BN8 352 aa13.05□□□□□ -0.32
CACNA1C-231ENST00000616390 LRR1Q96L50 414 aa13.05□□□□□ -0.32
CACNA1C-231ENST00000616390 SLC6A18Q96N87 628 aa13.05□□□□□ -0.32
CACNA1C-231ENST00000616390 SLC13A4Q9UKG4 626 aa13.05□□□□□ -0.32
CACNA1C-231ENST00000616390 MKLN1Q9UL63 735 aa13.05□□□□□ -0.32
CACNA1C-231ENST00000616390 GPR55Q9Y2T6 319 aaPredicted RBP13.05□□□□□ -0.32
CACNA1C-231ENST00000616390 ASB4Q9Y574 426 aa13.05□□□□□ -0.32
CACNA1C-231ENST00000616390 DNMT3AQ9Y6K1 912 aaPredicted RBP13.05□□□□□ -0.32
CACNA1C-231ENST00000616390 SYNDIG1LA6NDD5 238 aa13.05□□□□□ -0.32
CACNA1C-231ENST00000616390 IDH3BO43837 385 aa13.05□□□□□ -0.32
CACNA1C-231ENST00000616390 SPNP16150 400 aa13.05□□□□□ -0.32
CACNA1C-231ENST00000616390 ID2Q02363 134 aa13.05□□□□□ -0.32
CACNA1C-231ENST00000616390 SLX4IPQ5VYV7 408 aa13.05□□□□□ -0.32
CACNA1C-231ENST00000616390 ATCAYQ86WG3 371 aa13.05□□□□□ -0.32
CACNA1C-231ENST00000616390 SHISA5Q8N114 240 aa13.05□□□□□ -0.32
CACNA1C-231ENST00000616390 LCN9Q8WX39 176 aa13.05□□□□□ -0.32
CACNA1C-231ENST00000616390 ARSGQ96EG1 525 aa13.05□□□□□ -0.32
CACNA1C-231ENST00000616390 TRMT61AQ96FX7 289 aaKnown RBP13.05□□□□□ -0.32
CACNA1C-231ENST00000616390 MYADMQ96S97 322 aa13.05□□□□□ -0.32
CACNA1C-231ENST00000616390 APOOQ9BUR5 198 aa13.05□□□□□ -0.32
CACNA1C-231ENST00000616390 ASPNQ9BXN1 380 aa13.05□□□□□ -0.32
CACNA1C-231ENST00000616390 SLC25A19Q9HC21 320 aa13.05□□□□□ -0.32
CACNA1C-231ENST00000616390 HHATLQ9HCP6 504 aa13.05□□□□□ -0.32
CACNA1C-231ENST00000616390 GDE1Q9NZC3 331 aa13.05□□□□□ -0.32
CACNA1C-231ENST00000616390 CNOT2Q9NZN8 540 aaKnown RBP13.05□□□□□ -0.32
CACNA1C-231ENST00000616390 TBC1D29Q9UFV1 150 aa13.05□□□□□ -0.32
CACNA1C-231ENST00000616390 WBP11Q9Y2W2 641 aaKnown RBP13.05□□□□□ -0.32
CACNA1C-231ENST00000616390 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.05□□□□□ -0.32
CACNA1C-231ENST00000616390 MYL12BO14950 172 aa13.04□□□□□ -0.32
CACNA1C-231ENST00000616390 SNPHO15079 494 aa13.04□□□□□ -0.32
CACNA1C-231ENST00000616390 FCMRO60667 390 aa13.04□□□□□ -0.32
CACNA1C-231ENST00000616390 CRYZL1O95825 349 aa13.04□□□□□ -0.32
CACNA1C-231ENST00000616390 ADH1BP00325 375 aa13.04□□□□□ -0.32
CACNA1C-231ENST00000616390 CSTF2P33240 577 aaKnown RBP eCLIP13.04□□□□□ -0.32
CACNA1C-231ENST00000616390 RPS19P39019 145 aaKnown RBP13.04□□□□□ -0.32
CACNA1C-231ENST00000616390 PPP2CBP62714 309 aa13.04□□□□□ -0.32
CACNA1C-231ENST00000616390 PPP2CAP67775 309 aa13.04□□□□□ -0.32
CACNA1C-231ENST00000616390 SPANXN2Q5MJ10 180 aa13.04□□□□□ -0.32
CACNA1C-231ENST00000616390 USP30Q70CQ3 517 aa13.04□□□□□ -0.32
CACNA1C-231ENST00000616390 RRM2BQ7LG56 351 aa13.04□□□□□ -0.32
CACNA1C-231ENST00000616390 OR7D2Q96RA2 312 aa13.04□□□□□ -0.32
CACNA1C-231ENST00000616390 PHOX2BQ99453 314 aa13.04□□□□□ -0.32
CACNA1C-231ENST00000616390 BRWD1Q9NSI6 2320 aa13.04□□□□□ -0.32
CACNA1C-231ENST00000616390 MAN2C1Q9NTJ4 1040 aa13.04□□□□□ -0.32
CACNA1C-231ENST00000616390 WBP1LQ9NX94 342 aa13.04□□□□□ -0.32
CACNA1C-231ENST00000616390 EHD3Q9NZN3 535 aa13.04□□□□□ -0.32
CACNA1C-231ENST00000616390 TBX19O60806 448 aa13.04□□□□□ -0.32
CACNA1C-231ENST00000616390 MED26O95402 600 aa13.04□□□□□ -0.32
CACNA1C-231ENST00000616390 HBQ1P09105 142 aa13.04□□□□□ -0.32
CACNA1C-231ENST00000616390 CSNK2A2P19784 350 aaPredicted RBP13.04□□□□□ -0.32
CACNA1C-231ENST00000616390 DUSP6Q16828 381 aa13.04□□□□□ -0.32
CACNA1C-231ENST00000616390 OR2G6Q5TZ20 316 aa13.04□□□□□ -0.32
CACNA1C-231ENST00000616390 MTSS1LQ765P7 747 aa13.04□□□□□ -0.32
CACNA1C-231ENST00000616390 PRICKLE2Q7Z3G6 844 aa13.04□□□□□ -0.32
CACNA1C-231ENST00000616390 C16orf62Q7Z3J2 963 aa13.04□□□□□ -0.32
CACNA1C-231ENST00000616390 OR2L5Q8NG80 312 aa13.04□□□□□ -0.32
CACNA1C-231ENST00000616390 OR8J1Q8NGP2 316 aa13.04□□□□□ -0.32
CACNA1C-231ENST00000616390 OR10G6Q8NH81 332 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms