RNA–Protein interactions for RNA: ENST00000615901.4

SPTBN1-207, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 5 BASIC

Gene SPTBN1, Length 10,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-207ENST00000615901 FAM3CQ92520 227 aa8.65□□□□□ -1.02
SPTBN1-207ENST00000615901 FAM46AQ96IP4 442 aaKnown RBP8.65□□□□□ -1.02
SPTBN1-207ENST00000615901 CCDC32Q9BV29 185 aa8.65□□□□□ -1.02
SPTBN1-207ENST00000615901 ACSL6Q9UKU0 697 aa8.65□□□□□ -1.02
SPTBN1-207ENST00000615901 IGLV3-10A0A075B6K4 115 aa8.65□□□□□ -1.02
SPTBN1-207ENST00000615901 CLCA1A8K7I4 914 aa8.65□□□□□ -1.02
SPTBN1-207ENST00000615901 PRH1P02810 166 aa8.65□□□□□ -1.02
SPTBN1-207ENST00000615901 CD63P08962 238 aa8.65□□□□□ -1.02
SPTBN1-207ENST00000615901 ZNF619Q8N2I2 560 aa8.65□□□□□ -1.02
SPTBN1-207ENST00000615901 ZNF565Q8N9K5 539 aa8.65□□□□□ -1.02
SPTBN1-207ENST00000615901 ZNF304Q9HCX3 659 aa8.65□□□□□ -1.02
SPTBN1-207ENST00000615901 OBP2AQ9NY56 170 aa8.65□□□□□ -1.02
SPTBN1-207ENST00000615901 LSM1O15116 133 aaKnown RBP8.65□□□□□ -1.02
SPTBN1-207ENST00000615901 IL33O95760 270 aa8.65□□□□□ -1.02
SPTBN1-207ENST00000615901 HTR6P50406 440 aa8.65□□□□□ -1.02
SPTBN1-207ENST00000615901 TDGQ13569 410 aa8.65□□□□□ -1.02
SPTBN1-207ENST00000615901 EFR3AQ14156 821 aa8.65□□□□□ -1.02
SPTBN1-207ENST00000615901 SNX29P2Q8IUI4 249 aa8.65□□□□□ -1.02
SPTBN1-207ENST00000615901 CLECL1Q8IZS7 167 aa8.65□□□□□ -1.02
SPTBN1-207ENST00000615901 UBE2J2Q8N2K1 259 aa8.65□□□□□ -1.02
SPTBN1-207ENST00000615901 ACBD7Q8N6N7 88 aa8.65□□□□□ -1.02
SPTBN1-207ENST00000615901 OR2T4Q8NH00 348 aa8.65□□□□□ -1.02
SPTBN1-207ENST00000615901 FZD3Q9NPG1 666 aa8.65□□□□□ -1.02
SPTBN1-207ENST00000615901 CDC40O60508 579 aaKnown RBP eCLIP8.65□□□□□ -1.028e-9■□□□□ 8.7
SPTBN1-207ENST00000615901 SCGNO76038 276 aa8.65□□□□□ -1.02
SPTBN1-207ENST00000615901 MLLT10P55197 1068 aa8.65□□□□□ -1.02
SPTBN1-207ENST00000615901 SLC25A25Q6KCM7 469 aa8.65□□□□□ -1.02
SPTBN1-207ENST00000615901 ZNF534Q76KX8 674 aa8.65□□□□□ -1.02
SPTBN1-207ENST00000615901 CEACAM19Q7Z692 300 aa8.65□□□□□ -1.02
SPTBN1-207ENST00000615901 FGF13Q92913 245 aa8.65□□□□□ -1.02
SPTBN1-207ENST00000615901 UBXN10Q96LJ8 280 aa8.65□□□□□ -1.02
SPTBN1-207ENST00000615901 PRRC1Q96M27 445 aa8.65□□□□□ -1.02
SPTBN1-207ENST00000615901 WACQ9BTA9 647 aa8.65□□□□□ -1.02
SPTBN1-207ENST00000615901 APOOQ9BUR5 198 aa8.65□□□□□ -1.02
SPTBN1-207ENST00000615901 MEPEQ9NQ76 525 aaPredicted RBP8.65□□□□□ -1.02
SPTBN1-207ENST00000615901 NANSQ9NR45 359 aa8.65□□□□□ -1.02
SPTBN1-207ENST00000615901 CA14Q9ULX7 337 aa8.65□□□□□ -1.02
SPTBN1-207ENST00000615901 DOCK8Q8NF50 2099 aa8.65□□□□□ -1.02
SPTBN1-207ENST00000615901 VILLO15195 856 aa8.65□□□□□ -1.02
SPTBN1-207ENST00000615901 C1orf105O95561 183 aa8.65□□□□□ -1.02
SPTBN1-207ENST00000615901 MRPL3P09001 348 aaKnown RBP8.65□□□□□ -1.02
SPTBN1-207ENST00000615901 ANXA3P12429 323 aa8.65□□□□□ -1.02
SPTBN1-207ENST00000615901 MTNR1AP48039 350 aa8.65□□□□□ -1.02
SPTBN1-207ENST00000615901 SELENOWP63302 87 aa8.65□□□□□ -1.02
SPTBN1-207ENST00000615901 DEFB103AP81534 67 aa8.65□□□□□ -1.02
SPTBN1-207ENST00000615901 MLLT1Q03111 559 aaPredicted RBP8.65□□□□□ -1.02
SPTBN1-207ENST00000615901 PLP2Q04941 152 aa8.65□□□□□ -1.02
SPTBN1-207ENST00000615901 MAL2Q969L2 176 aa8.65□□□□□ -1.02
SPTBN1-207ENST00000615901 BARD1Q99728 777 aaKnown RBP8.65□□□□□ -1.02
SPTBN1-207ENST00000615901 SLC46A2Q9BY10 475 aa8.65□□□□□ -1.02
SPTBN1-207ENST00000615901 C2orf92A0A1B0GVN3 265 aa8.65□□□□□ -1.03
SPTBN1-207ENST00000615901 PRSS38A1L453 326 aa8.65□□□□□ -1.03
SPTBN1-207ENST00000615901 ZNF878C9JN71 531 aa8.65□□□□□ -1.03
SPTBN1-207ENST00000615901 L7N2F9 121 aa8.65□□□□□ -1.03
SPTBN1-207ENST00000615901 ABLIM3O94929 683 aa8.65□□□□□ -1.03
SPTBN1-207ENST00000615901 PGGT1BP53609 377 aa8.65□□□□□ -1.03
SPTBN1-207ENST00000615901 VAMP2P63027 116 aa8.65□□□□□ -1.03
SPTBN1-207ENST00000615901 PSPHP78330 225 aa8.65□□□□□ -1.03
SPTBN1-207ENST00000615901 BCL2L15Q5TBC7 163 aa8.65□□□□□ -1.03
SPTBN1-207ENST00000615901 LIPIQ6XZB0 460 aa8.65□□□□□ -1.03
SPTBN1-207ENST00000615901 PAQR9Q6ZVX9 377 aa8.65□□□□□ -1.03
SPTBN1-207ENST00000615901 ZNF283Q8N7M2 679 aa8.65□□□□□ -1.03
SPTBN1-207ENST00000615901 NETO1Q8TDF5 533 aa8.65□□□□□ -1.03
SPTBN1-207ENST00000615901 JPH3Q8WXH2 748 aaPredicted RBP8.65□□□□□ -1.03
SPTBN1-207ENST00000615901 AKAP1Q92667 903 aaKnown RBP eCLIP8.65□□□□□ -1.037e-7■□□□□ 10.2
SPTBN1-207ENST00000615901 ISL2Q96A47 359 aa8.65□□□□□ -1.03
SPTBN1-207ENST00000615901 EPHX3Q9H6B9 360 aa8.65□□□□□ -1.03
SPTBN1-207ENST00000615901 INPP5EQ9NRR6 644 aa8.65□□□□□ -1.03
SPTBN1-207ENST00000615901 TMX2-CTNND1H3BSU7 103 aa8.65□□□□□ -1.03
SPTBN1-207ENST00000615901 H2BFMP0C1H6 154 aa8.65□□□□□ -1.03
SPTBN1-207ENST00000615901 CELP19835 753 aa8.65□□□□□ -1.03
SPTBN1-207ENST00000615901 HLA-FP30511 346 aa8.65□□□□□ -1.03
SPTBN1-207ENST00000615901 CHAF1BQ13112 559 aa8.65□□□□□ -1.03
SPTBN1-207ENST00000615901 RUNDC3AQ59EK9 446 aa8.65□□□□□ -1.03
SPTBN1-207ENST00000615901 TAS1R1Q7RTX1 841 aa8.65□□□□□ -1.03
SPTBN1-207ENST00000615901 SLC5A8Q8N695 610 aa8.65□□□□□ -1.03
SPTBN1-207ENST00000615901 SLC37A3Q8NCC5 494 aa8.65□□□□□ -1.03
SPTBN1-207ENST00000615901 CITED4Q96RK1 184 aa8.65□□□□□ -1.03
SPTBN1-207ENST00000615901 GPR83Q9NYM4 423 aa8.65□□□□□ -1.03
SPTBN1-207ENST00000615901 ACTR10Q9NZ32 417 aa8.65□□□□□ -1.03
SPTBN1-207ENST00000615901 SLC35A3Q9Y2D2 325 aa8.65□□□□□ -1.03
SPTBN1-207ENST00000615901 PKDREJQ9NTG1 2253 aa8.65□□□□□ -1.03
SPTBN1-207ENST00000615901 KIAA0513O60268 411 aa8.65□□□□□ -1.03
SPTBN1-207ENST00000615901 IL1RNP18510 177 aa8.65□□□□□ -1.03
SPTBN1-207ENST00000615901 UGT2B10P36537 528 aa8.65□□□□□ -1.03
SPTBN1-207ENST00000615901 MMP12P39900 470 aa8.65□□□□□ -1.03
SPTBN1-207ENST00000615901 FRKP42685 505 aaPredicted RBP8.65□□□□□ -1.03
SPTBN1-207ENST00000615901 PHC1P78364 1004 aa8.65□□□□□ -1.03
SPTBN1-207ENST00000615901 ACY1Q03154 408 aa8.65□□□□□ -1.03
SPTBN1-207ENST00000615901 SYCE2Q6PIF2 218 aa8.65□□□□□ -1.03
SPTBN1-207ENST00000615901 ZNF551Q7Z340 670 aaPredicted RBP8.65□□□□□ -1.03
SPTBN1-207ENST00000615901 ZSCAN4Q8NAM6 433 aaPredicted RBP8.65□□□□□ -1.03
SPTBN1-207ENST00000615901 IL37Q9NZH6 218 aa8.65□□□□□ -1.03
SPTBN1-207ENST00000615901 RTCAO00442 366 aaKnown RBP8.64□□□□□ -1.03
SPTBN1-207ENST00000615901 DNAJB6O75190 326 aa8.64□□□□□ -1.03
SPTBN1-207ENST00000615901 GPR4P46093 362 aa8.64□□□□□ -1.03
SPTBN1-207ENST00000615901 RPL34P49207 117 aaKnown RBP8.64□□□□□ -1.03
SPTBN1-207ENST00000615901 HERV-K104P61576 105 aa8.64□□□□□ -1.03
SPTBN1-207ENST00000615901 CRYZQ08257 329 aaKnown RBP8.64□□□□□ -1.03
SPTBN1-207ENST00000615901 SPHARQ15513 63 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms