RNA–Protein interactions for RNA: ENST00000612130.4

UBE2F-223, Transcript of ubiquitin conjugating enzyme E2 F (putative), human

APPRIS P1 TSL 5 BASIC

Gene UBE2F, Length 2,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2F-223	ENST00000612130	MED17	Q9NVC6	651 aa		12.93	□□□□□ -0.34
UBE2F-223	ENST00000612130	SLCO1C1	Q9NYB5	712 aa		12.93	□□□□□ -0.34
UBE2F-223	ENST00000612130	CFAP97	Q9P2B7	532 aa		12.93	□□□□□ -0.34
UBE2F-223	ENST00000612130	ZNF222	Q9UK12	451 aa		12.93	□□□□□ -0.34
UBE2F-223	ENST00000612130	COL4A6	Q14031	1691 aa		12.93	□□□□□ -0.34
UBE2F-223	ENST00000612130	PRAMEF27	A3QJZ7	478 aa		12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130	GLTPD2	A6NH11	291 aa		12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130	CD8B2	A6NJW9	211 aa		12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130	GTPBP1	O00178	669 aa	Known RBP	12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130	CDK2AP1	O14519	115 aa		12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130	CASC3	O15234	703 aa	Known RBP	12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130	IFNA7	P01567	189 aa		12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130	NR2F1	P10589	423 aa		12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130	CD8B	P10966	210 aa		12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130	NAT1	P18440	290 aa		12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130	AHCY	P23526	432 aa		12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130	CCT3	P49368	545 aa	Known RBP	12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130	EPHB3	P54753	998 aa		12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130	SHC2	P98077	582 aa		12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130	HSF2	Q03933	536 aa		12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130	TMEM115	Q12893	351 aa	Predicted RBP	12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130	MLC1	Q15049	377 aa		12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130	NTRK2	Q16620	822 aa		12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130	GPR139	Q6DWJ6	353 aa		12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130	TMEM220	Q6QAJ8	160 aa		12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130	TMEM91	Q6ZNR0	172 aa		12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130		Q6ZVU0	165 aa		12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130	ZNF740	Q8NDX6	193 aa		12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130	SETD7	Q8WTS6	366 aa	Known RBP	12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130	TM4SF18	Q96CE8	201 aa		12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130	ZNF689	Q96CS4	500 aa	Predicted RBP	12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130	CAMK1G	Q96NX5	476 aa		12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130	SORCS2	Q96PQ0	1159 aa		12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130	SECISBP2	Q96T21	854 aa	Known RBP	12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130	VN1R3	Q9BXE9	311 aa		12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130	TEX12	Q9BXU0	123 aa		12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130	BCL2L10	Q9HD36	194 aa		12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130	ACSS1	Q9NUB1	689 aa	Predicted RBP	12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130	IMP3	Q9NV31	184 aa	Known RBP	12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130		A0A1B0GVI7	797 aa		12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130	C2orf92	A0A1B0GVN3	265 aa		12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130	RPS10-NUDT3	A0A1W2PQS6	291 aa		12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130	FAM170B	A6NMN3	283 aa		12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130		I3L521	148 aa		12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130	HR	O43593	1189 aa		12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130	PI15	O43692	258 aa		12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130	ACSL1	P33121	698 aa		12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130	PITPNB	P48739	271 aa		12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130	LSM11	P83369	360 aa	Known RBP eCLIP	12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130	ZNF791	Q3KP31	576 aa	Predicted RBP	12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130	IDNK	Q5T6J7	187 aa		12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130	KHDRBS2	Q5VWX1	349 aa	Known RBP	12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130	ZNF322	Q6U7Q0	402 aa	Predicted RBP	12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130	ASB18	Q6ZVZ8	466 aa		12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130	OAF	Q86UD1	273 aa		12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130	OR4F15	Q8NGB8	312 aa		12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130	SPRYD4	Q8WW59	207 aa	Predicted RBP	12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130	OTUB1	Q96FW1	271 aa	Predicted RBP	12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130	C17orf62	Q9BQA9	187 aa		12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130	C1QTNF7	Q9BXJ2	289 aa		12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130	OR51J1	Q9H342	316 aa		12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130	OR51I1	Q9H343	314 aa		12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130	IL21	Q9HBE4	155 aa		12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130	NUDT15	Q9NV35	164 aa		12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130	CUEDC1	Q9NWM3	386 aa	Predicted RBP	12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130	COPZ2	Q9P299	210 aa		12.92	□□□□□ -0.34
UBE2F-223	ENST00000612130	OBSL1	O75147	1896 aa		12.91	□□□□□ -0.34
UBE2F-223	ENST00000612130		A0A087WUU8	490 aa		12.91	□□□□□ -0.34
UBE2F-223	ENST00000612130	TSPAN11	A1L157	253 aa		12.91	□□□□□ -0.34
UBE2F-223	ENST00000612130	CARNS1	A5YM72	827 aa		12.91	□□□□□ -0.34
UBE2F-223	ENST00000612130	PRRG1	O14668	218 aa		12.91	□□□□□ -0.34
UBE2F-223	ENST00000612130	LANCL1	O43813	399 aa		12.91	□□□□□ -0.34
UBE2F-223	ENST00000612130	EPPIN	O95925	133 aa		12.91	□□□□□ -0.34
UBE2F-223	ENST00000612130	PEPD	P12955	493 aa		12.91	□□□□□ -0.34
UBE2F-223	ENST00000612130	ACP5	P13686	325 aa		12.91	□□□□□ -0.34
UBE2F-223	ENST00000612130	HTR1F	P30939	366 aa		12.91	□□□□□ -0.34
UBE2F-223	ENST00000612130	KHK	P50053	298 aa		12.91	□□□□□ -0.34
UBE2F-223	ENST00000612130	SNTA1	Q13424	505 aa		12.91	□□□□□ -0.34
UBE2F-223	ENST00000612130	MFSD13A	Q14CX5	517 aa		12.91	□□□□□ -0.34
UBE2F-223	ENST00000612130	PRAMEF14	Q5SWL7	426 aa		12.91	□□□□□ -0.34
UBE2F-223	ENST00000612130	PRAMEF13	Q5VWM6	474 aa		12.91	□□□□□ -0.34
UBE2F-223	ENST00000612130	TECPR1	Q7Z6L1	1165 aa		12.91	□□□□□ -0.34
UBE2F-223	ENST00000612130	COMMD7	Q86VX2	200 aa		12.91	□□□□□ -0.34
UBE2F-223	ENST00000612130	FAM129C	Q86XR2	697 aa		12.91	□□□□□ -0.34
UBE2F-223	ENST00000612130	ZNF366	Q8N895	744 aa		12.91	□□□□□ -0.34
UBE2F-223	ENST00000612130	SUN3	Q8TAQ9	357 aa		12.91	□□□□□ -0.34
UBE2F-223	ENST00000612130	CCDC120	Q96HB5	630 aa		12.91	□□□□□ -0.34
UBE2F-223	ENST00000612130	ACAT2	Q9BWD1	397 aa		12.91	□□□□□ -0.34
UBE2F-223	ENST00000612130	CLEC4M	Q9H2X3	399 aa	Predicted RBP	12.91	□□□□□ -0.34
UBE2F-223	ENST00000612130	MARK1	Q9P0L2	795 aa		12.91	□□□□□ -0.34
UBE2F-223	ENST00000612130	NUP210	Q8TEM1	1887 aa	Predicted RBP	12.91	□□□□□ -0.34
UBE2F-223	ENST00000612130	THSD7B	Q9C0I4	1608 aa		12.91	□□□□□ -0.34
UBE2F-223	ENST00000612130	BET1	O15155	118 aa		12.91	□□□□□ -0.34
UBE2F-223	ENST00000612130	SURF4	O15260	269 aa		12.91	□□□□□ -0.34
UBE2F-223	ENST00000612130	RNF13	O43567	381 aa		12.91	□□□□□ -0.34
UBE2F-223	ENST00000612130	CKM	P06732	381 aa		12.91	□□□□□ -0.34
UBE2F-223	ENST00000612130	TFPI	P10646	304 aa		12.91	□□□□□ -0.34
UBE2F-223	ENST00000612130	NPR2	P20594	1047 aa		12.91	□□□□□ -0.34
UBE2F-223	ENST00000612130	BSG	P35613	385 aa		12.91	□□□□□ -0.34
UBE2F-223	ENST00000612130	RNF144A	P50876	292 aa	Predicted RBP	12.91	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms