RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 CCNJQ5T5M9 372 aa7.1□□□□□ -1.27
MSH6-211ENST00000606499 IRAK1BP1Q5VVH5 260 aa7.1□□□□□ -1.27
MSH6-211ENST00000606499 HLA-DQA1Q5Y7H0 255 aa7.1□□□□□ -1.27
MSH6-211ENST00000606499 NANOGP8Q6NSW7 305 aa7.1□□□□□ -1.27
MSH6-211ENST00000606499 CDC73Q6P1J9 531 aa7.1□□□□□ -1.27
MSH6-211ENST00000606499 BORAQ6PGQ7 559 aa7.1□□□□□ -1.27
MSH6-211ENST00000606499 HACD2Q6Y1H2 254 aa7.1□□□□□ -1.27
MSH6-211ENST00000606499 LINC00696Q6ZRV3 163 aa7.1□□□□□ -1.27
MSH6-211ENST00000606499 OLIG3Q7RTU3 272 aa7.1□□□□□ -1.27
MSH6-211ENST00000606499 RPS19BP1Q86WX3 136 aaKnown RBP7.1□□□□□ -1.27
MSH6-211ENST00000606499 LGI4Q8N135 537 aa7.1□□□□□ -1.27
MSH6-211ENST00000606499 BEST3Q8N1M1 668 aa7.1□□□□□ -1.27
MSH6-211ENST00000606499 ARMC10Q8N2F6 343 aa7.1□□□□□ -1.27
MSH6-211ENST00000606499 SLC5A8Q8N695 610 aa7.1□□□□□ -1.27
MSH6-211ENST00000606499 RBM15BQ8NDT2 890 aaKnown RBP7.1□□□□□ -1.27
MSH6-211ENST00000606499 FDCSPQ8NFU4 85 aa7.1□□□□□ -1.27
MSH6-211ENST00000606499 OR52N2Q8NGI0 321 aa7.1□□□□□ -1.27
MSH6-211ENST00000606499 OR5L2Q8NGL0 311 aa7.1□□□□□ -1.27
MSH6-211ENST00000606499 NUBPLQ8TB37 319 aa7.1□□□□□ -1.27
MSH6-211ENST00000606499 MIPOL1Q8TD10 442 aa7.1□□□□□ -1.27
MSH6-211ENST00000606499 GPR151Q8TDV0 419 aa7.1□□□□□ -1.27
MSH6-211ENST00000606499 SNRNP27Q8WVK2 155 aaKnown RBP7.1□□□□□ -1.27
MSH6-211ENST00000606499 APOBEC4Q8WW27 367 aaKnown RBP7.1□□□□□ -1.27
MSH6-211ENST00000606499 HOXB13Q92826 284 aaPredicted RBP7.1□□□□□ -1.27
MSH6-211ENST00000606499 EXTL1Q92935 676 aa7.1□□□□□ -1.27
MSH6-211ENST00000606499 TMEM125Q96AQ2 219 aa7.1□□□□□ -1.27
MSH6-211ENST00000606499 RMND5BQ96G75 393 aaPredicted RBP7.1□□□□□ -1.27
MSH6-211ENST00000606499 SLC35A4Q96G79 324 aa7.1□□□□□ -1.27
MSH6-211ENST00000606499 LCORQ96JN0 433 aaPredicted RBP7.1□□□□□ -1.27
MSH6-211ENST00000606499 RASL10BQ96S79 203 aa7.1□□□□□ -1.27
MSH6-211ENST00000606499 GPATCH1Q9BRR8 931 aaKnown RBP7.1□□□□□ -1.27
MSH6-211ENST00000606499 LMF2Q9BU23 707 aaKnown RBP7.1□□□□□ -1.27
MSH6-211ENST00000606499 CDCP1Q9H5V8 836 aa7.1□□□□□ -1.27
MSH6-211ENST00000606499 NANOGQ9H9S0 305 aa7.1□□□□□ -1.27
MSH6-211ENST00000606499 ZBTB20Q9HC78 741 aaPredicted RBP7.1□□□□□ -1.27
MSH6-211ENST00000606499 GMPR2Q9P2T1 348 aaKnown RBP7.1□□□□□ -1.27
MSH6-211ENST00000606499 MYOTQ9UBF9 498 aa7.1□□□□□ -1.27
MSH6-211ENST00000606499 USP22Q9UPT9 525 aa7.1□□□□□ -1.27
MSH6-211ENST00000606499 CFL2Q9Y281 166 aa7.1□□□□□ -1.27
MSH6-211ENST00000606499 GPR55Q9Y2T6 319 aaPredicted RBP7.1□□□□□ -1.27
MSH6-211ENST00000606499 OR10H1Q9Y4A9 318 aa7.1□□□□□ -1.27
MSH6-211ENST00000606499 NUP214P35658 2090 aaPredicted RBP7.1□□□□□ -1.27
MSH6-211ENST00000606499 MED13Q9UHV7 2174 aa7.09□□□□□ -1.27
MSH6-211ENST00000606499 PTPRQQ9UMZ3 2332 aa7.09□□□□□ -1.27
MSH6-211ENST00000606499 EPG5Q9HCE0 2579 aa7.09□□□□□ -1.27
MSH6-211ENST00000606499 PRAMEF27A3QJZ7 478 aa7.09□□□□□ -1.27
MSH6-211ENST00000606499 A8MVJ9 347 aa7.09□□□□□ -1.27
MSH6-211ENST00000606499 EVPLLA8MZ36 301 aa7.09□□□□□ -1.27
MSH6-211ENST00000606499 B2RBV5 119 aa7.09□□□□□ -1.27
MSH6-211ENST00000606499 NME4O00746 187 aa7.09□□□□□ -1.27
MSH6-211ENST00000606499 ASNA1O43681 348 aa7.09□□□□□ -1.27
MSH6-211ENST00000606499 TNFRSF21O75509 655 aa7.09□□□□□ -1.27
MSH6-211ENST00000606499 CEACAM4O75871 244 aa7.09□□□□□ -1.27
MSH6-211ENST00000606499 OR6B1O95007 311 aa7.09□□□□□ -1.27
MSH6-211ENST00000606499 IGKV1D-16P01601 117 aa7.09□□□□□ -1.27
MSH6-211ENST00000606499 ALPPP05187 535 aa7.09□□□□□ -1.27
MSH6-211ENST00000606499 KRT16P08779 473 aa7.09□□□□□ -1.27
MSH6-211ENST00000606499 DRD5P21918 477 aa7.09□□□□□ -1.27
MSH6-211ENST00000606499 PPIBP23284 216 aaKnown RBP7.09□□□□□ -1.27
MSH6-211ENST00000606499 ABCD3P28288 659 aa7.09□□□□□ -1.27
MSH6-211ENST00000606499 SOX3P41225 446 aa7.09□□□□□ -1.27
MSH6-211ENST00000606499 RFX3P48380 749 aa7.09□□□□□ -1.27
MSH6-211ENST00000606499 MNAT1P51948 309 aa7.09□□□□□ -1.27
MSH6-211ENST00000606499 SLC7A2P52569 658 aa7.09□□□□□ -1.27
MSH6-211ENST00000606499 MLF1P58340 268 aa7.09□□□□□ -1.27
MSH6-211ENST00000606499 DSTNP60981 165 aa7.09□□□□□ -1.27
MSH6-211ENST00000606499 PSME3P61289 254 aa7.09□□□□□ -1.27
MSH6-211ENST00000606499 DCAF7P61962 342 aa7.09□□□□□ -1.27
MSH6-211ENST00000606499 MRPS22P82650 360 aaKnown RBP7.09□□□□□ -1.27
MSH6-211ENST00000606499 PLCXD2Q0VAA5 305 aa7.09□□□□□ -1.27
MSH6-211ENST00000606499 BNIP1Q12981 228 aa7.09□□□□□ -1.27
MSH6-211ENST00000606499 SYPL1Q16563 259 aa7.09□□□□□ -1.27
MSH6-211ENST00000606499 CYP51A1Q16850 503 aa7.09□□□□□ -1.27
MSH6-211ENST00000606499 COL28A1Q2UY09 1125 aa7.09□□□□□ -1.27
MSH6-211ENST00000606499 PIGGQ5H8A4 983 aa7.09□□□□□ -1.27
MSH6-211ENST00000606499 CRB2Q5IJ48 1285 aa7.09□□□□□ -1.27
MSH6-211ENST00000606499 DCST2Q5T1A1 773 aa7.09□□□□□ -1.27
MSH6-211ENST00000606499 ZNF468Q5VIY5 522 aaPredicted RBP7.09□□□□□ -1.27
MSH6-211ENST00000606499 ABHD17BQ5VST6 288 aa7.09□□□□□ -1.27
MSH6-211ENST00000606499 DESI1Q6ICB0 168 aa7.09□□□□□ -1.27
MSH6-211ENST00000606499 ZCCHC12Q6PEW1 402 aa7.09□□□□□ -1.27
MSH6-211ENST00000606499 FIGNL1Q6PIW4 674 aa7.09□□□□□ -1.27
MSH6-211ENST00000606499 C19orf48Q6RUI8 117 aa7.09□□□□□ -1.27
MSH6-211ENST00000606499 ZAR1Q86SH2 424 aa7.09□□□□□ -1.27
MSH6-211ENST00000606499 COX18Q8N8Q8 333 aa7.09□□□□□ -1.27
MSH6-211ENST00000606499 C17orf47Q8NEP4 570 aa7.09□□□□□ -1.27
MSH6-211ENST00000606499 OR8J3Q8NGG0 315 aa7.09□□□□□ -1.27
MSH6-211ENST00000606499 ADAMTS15Q8TE58 950 aa7.09□□□□□ -1.27
MSH6-211ENST00000606499 XAGE5Q8WWM1 108 aa7.09□□□□□ -1.27
MSH6-211ENST00000606499 MAL2Q969L2 176 aa7.09□□□□□ -1.27
MSH6-211ENST00000606499 TMBIM1Q969X1 311 aa7.09□□□□□ -1.27
MSH6-211ENST00000606499 TP53INP1Q96A56 240 aa7.09□□□□□ -1.27
MSH6-211ENST00000606499 EFHD2Q96C19 240 aaPredicted RBP7.09□□□□□ -1.27
MSH6-211ENST00000606499 OMA1Q96E52 524 aa7.09□□□□□ -1.27
MSH6-211ENST00000606499 THUMPD3Q9BV44 507 aaKnown RBP7.09□□□□□ -1.27
MSH6-211ENST00000606499 PIGUQ9H490 435 aa7.09□□□□□ -1.27
MSH6-211ENST00000606499 PIF1Q9H611 641 aa7.09□□□□□ -1.27
MSH6-211ENST00000606499 ZNF552Q9H707 407 aaPredicted RBP7.09□□□□□ -1.27
MSH6-211ENST00000606499 KAT8Q9H7Z6 458 aaKnown RBP7.09□□□□□ -1.27
MSH6-211ENST00000606499 Q9N2J8 555 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms