RNA–Protein interactions for RNA: ENST00000604929.1

TUBB4B-202, Transcript of tubulin beta 4B class IVb, humanhuman

TSL 1 (best)

Gene TUBB4B, Length 2,035 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-202ENST00000604929 SDF2Q99470 211 aa17.89■□□□□ 0.45
TUBB4B-202ENST00000604929 PRR14Q9BWN1 585 aa17.89■□□□□ 0.45
TUBB4B-202ENST00000604929 CLK4Q9HAZ1 481 aaKnown RBP17.89■□□□□ 0.45
TUBB4B-202ENST00000604929 FANCEQ9HB96 536 aa17.89■□□□□ 0.45
TUBB4B-202ENST00000604929 ZNF304Q9HCX3 659 aa17.89■□□□□ 0.45
TUBB4B-202ENST00000604929 BATF3Q9NR55 127 aa17.89■□□□□ 0.45
TUBB4B-202ENST00000604929 RLIMQ9NVW2 624 aa17.89■□□□□ 0.45
TUBB4B-202ENST00000604929 GPR179Q6PRD1 2367 aa17.89■□□□□ 0.45
TUBB4B-202ENST00000604929 DPPA5A6NC42 116 aa17.88■□□□□ 0.45
TUBB4B-202ENST00000604929 H0YAE9 185 aa17.88■□□□□ 0.45
TUBB4B-202ENST00000604929 TOX3O15405 576 aaPredicted RBP17.88■□□□□ 0.45
TUBB4B-202ENST00000604929 TNFAIP8O95379 198 aa17.88■□□□□ 0.45
TUBB4B-202ENST00000604929 AGR2O95994 175 aa17.88■□□□□ 0.45
TUBB4B-202ENST00000604929 PABPC4LP0CB38 370 aaKnown RBP17.88■□□□□ 0.45
TUBB4B-202ENST00000604929 MPLP40238 635 aa17.88■□□□□ 0.45
TUBB4B-202ENST00000604929 RFX3P48380 749 aa17.88■□□□□ 0.45
TUBB4B-202ENST00000604929 PIN1Q13526 163 aaPredicted RBP17.88■□□□□ 0.45
TUBB4B-202ENST00000604929 ARHGAP11BQ3KRB8 267 aa17.88■□□□□ 0.45
TUBB4B-202ENST00000604929 FIGNL1Q6PIW4 674 aa17.88■□□□□ 0.45
TUBB4B-202ENST00000604929 FRRS1Q6ZNA5 592 aa17.88■□□□□ 0.45
TUBB4B-202ENST00000604929 COX18Q8N8Q8 333 aa17.88■□□□□ 0.45
TUBB4B-202ENST00000604929 ZNF555Q8NEP9 628 aa17.88■□□□□ 0.45
TUBB4B-202ENST00000604929 OR4D9Q8NGE8 314 aa17.88■□□□□ 0.45
TUBB4B-202ENST00000604929 GIPC3Q8TF64 312 aa17.88■□□□□ 0.45
TUBB4B-202ENST00000604929 FEVQ99581 238 aa17.88■□□□□ 0.45
TUBB4B-202ENST00000604929 SLC7A5P2Q9GIP4 190 aa17.88■□□□□ 0.45
TUBB4B-202ENST00000604929 GABARAPL1Q9H0R8 117 aa17.88■□□□□ 0.45
TUBB4B-202ENST00000604929 LANCL2Q9NS86 450 aa17.88■□□□□ 0.45
TUBB4B-202ENST00000604929 CALML5Q9NZT1 146 aa17.88■□□□□ 0.45
TUBB4B-202ENST00000604929 WDR45Q9Y484 360 aa17.88■□□□□ 0.45
TUBB4B-202ENST00000604929 CFAP54Q96N23 3096 aa17.88■□□□□ 0.45
TUBB4B-202ENST00000604929 GXYLT2A0PJZ3 443 aa17.88■□□□□ 0.45
TUBB4B-202ENST00000604929 BLACEA4D250 179 aa17.88■□□□□ 0.45
TUBB4B-202ENST00000604929 CLDN24A6NM45 220 aa17.88■□□□□ 0.45
TUBB4B-202ENST00000604929 FRS3O43559 492 aa17.88■□□□□ 0.45
TUBB4B-202ENST00000604929 TPST2O60704 377 aa17.88■□□□□ 0.45
TUBB4B-202ENST00000604929 SLITRK5O94991 958 aa17.88■□□□□ 0.45
TUBB4B-202ENST00000604929 LGI1O95970 557 aa17.88■□□□□ 0.45
TUBB4B-202ENST00000604929 CKMT1AP12532 417 aa17.88■□□□□ 0.45
TUBB4B-202ENST00000604929 RAD23AP54725 363 aa17.88■□□□□ 0.45
TUBB4B-202ENST00000604929 IGLV3-21P80748 117 aaPredicted RBP17.88■□□□□ 0.45
TUBB4B-202ENST00000604929 ZNF155Q12901 538 aaPredicted RBP17.88■□□□□ 0.45
TUBB4B-202ENST00000604929 PRAMEF8Q5VWM4 474 aa17.88■□□□□ 0.45
TUBB4B-202ENST00000604929 PRAMEF7Q5VXH5 474 aa17.88■□□□□ 0.45
TUBB4B-202ENST00000604929 TYW3Q6IPR3 259 aaKnown RBP17.88■□□□□ 0.45
TUBB4B-202ENST00000604929 USP51Q70EK9 711 aa17.88■□□□□ 0.45
TUBB4B-202ENST00000604929 ZNF786Q8N393 782 aa17.88■□□□□ 0.45
TUBB4B-202ENST00000604929 SLC5A8Q8N695 610 aa17.88■□□□□ 0.45
TUBB4B-202ENST00000604929 OR4C15Q8NGM1 316 aa17.88■□□□□ 0.45
TUBB4B-202ENST00000604929 OR6T1Q8NGN1 323 aa17.88■□□□□ 0.45
TUBB4B-202ENST00000604929 OR52P1PQ8NH57 321 aa17.88■□□□□ 0.45
TUBB4B-202ENST00000604929 PHF10Q8WUB8 498 aaKnown RBP17.88■□□□□ 0.45
TUBB4B-202ENST00000604929 CLIP3Q96DZ5 547 aa17.88■□□□□ 0.45
TUBB4B-202ENST00000604929 MVB12AQ96EY5 273 aa17.88■□□□□ 0.45
TUBB4B-202ENST00000604929 CCDC74BQ96LY2 380 aa17.88■□□□□ 0.45
TUBB4B-202ENST00000604929 RDH12Q96NR8 316 aa17.88■□□□□ 0.45
TUBB4B-202ENST00000604929 RIBC2Q9H4K1 309 aa17.88■□□□□ 0.45
TUBB4B-202ENST00000604929 NMNAT1Q9HAN9 279 aaPredicted RBP17.88■□□□□ 0.45
TUBB4B-202ENST00000604929 CTPS2Q9NRF8 586 aa17.88■□□□□ 0.45
TUBB4B-202ENST00000604929 PNPLA3Q9NST1 481 aa17.88■□□□□ 0.45
TUBB4B-202ENST00000604929 CDC14AQ9UNH5 594 aa17.88■□□□□ 0.45
TUBB4B-202ENST00000604929 GPR55Q9Y2T6 319 aaPredicted RBP17.88■□□□□ 0.45
TUBB4B-202ENST00000604929 R4GN57 208 aa17.88■□□□□ 0.45
TUBB4B-202ENST00000604929 LOC100130705A0A1B0GUX0 176 aa17.87■□□□□ 0.45
TUBB4B-202ENST00000604929 A8MUA0 341 aa17.87■□□□□ 0.45
TUBB4B-202ENST00000604929 POU2F1P14859 743 aa17.87■□□□□ 0.45
TUBB4B-202ENST00000604929 STT3AP46977 705 aa17.87■□□□□ 0.45
TUBB4B-202ENST00000604929 GCGRP47871 477 aa17.87■□□□□ 0.45
TUBB4B-202ENST00000604929 RNF144AP50876 292 aaPredicted RBP17.87■□□□□ 0.45
TUBB4B-202ENST00000604929 MICAQ29983 383 aa17.87■□□□□ 0.45
TUBB4B-202ENST00000604929 PROX2Q3B8N5 592 aa17.87■□□□□ 0.45
TUBB4B-202ENST00000604929 DCST2Q5T1A1 773 aa17.87■□□□□ 0.45
TUBB4B-202ENST00000604929 PHF19Q5T6S3 580 aa17.87■□□□□ 0.45
TUBB4B-202ENST00000604929 TTC33Q6PID6 262 aaPredicted RBP17.87■□□□□ 0.45
TUBB4B-202ENST00000604929 ZNF605Q86T29 641 aa17.87■□□□□ 0.45
TUBB4B-202ENST00000604929 CLIP4Q8N3C7 705 aa17.87■□□□□ 0.45
TUBB4B-202ENST00000604929 PIK3C3Q8NEB9 887 aa17.87■□□□□ 0.45
TUBB4B-202ENST00000604929 CNDP2Q96KP4 475 aaKnown RBP17.87■□□□□ 0.45
TUBB4B-202ENST00000604929 MTHFD2LQ9H903 347 aaPredicted RBP17.87■□□□□ 0.45
TUBB4B-202ENST00000604929 PNO1Q9NRX1 252 aaKnown RBP17.87■□□□□ 0.45
TUBB4B-202ENST00000604929 KRT84Q9NSB2 600 aa17.87■□□□□ 0.45
TUBB4B-202ENST00000604929 ERVK-19Q9WJR5 959 aa17.87■□□□□ 0.45
TUBB4B-202ENST00000604929 DTX4Q9Y2E6 619 aa17.87■□□□□ 0.45
TUBB4B-202ENST00000604929 DSPPQ9NZW4 1301 aa17.87■□□□□ 0.45
TUBB4B-202ENST00000604929 MSL3P1P0C860 447 aa17.86■□□□□ 0.45
TUBB4B-202ENST00000604929 ATP6V1B1P15313 513 aa17.86■□□□□ 0.45
TUBB4B-202ENST00000604929 FBLP22087 321 aaKnown RBP17.86■□□□□ 0.45
TUBB4B-202ENST00000604929 EPHA2P29317 976 aa17.86■□□□□ 0.45
TUBB4B-202ENST00000604929 EMDP50402 254 aa17.86■□□□□ 0.45
TUBB4B-202ENST00000604929 TTC23Q5W5X9 447 aa17.86■□□□□ 0.45
TUBB4B-202ENST00000604929 LAPTM4BQ86VI4 370 aa17.86■□□□□ 0.45
TUBB4B-202ENST00000604929 SLC38A9Q8NBW4 561 aa17.86■□□□□ 0.45
TUBB4B-202ENST00000604929 OR10G2Q8NGC3 310 aa17.86■□□□□ 0.45
TUBB4B-202ENST00000604929 OR4N2Q8NGD1 307 aa17.86■□□□□ 0.45
TUBB4B-202ENST00000604929 OR9Q2Q8NGE9 314 aa17.86■□□□□ 0.45
TUBB4B-202ENST00000604929 TSLPQ969D9 159 aa17.86■□□□□ 0.45
TUBB4B-202ENST00000604929 ALPK1Q96QP1 1244 aa17.86■□□□□ 0.45
TUBB4B-202ENST00000604929 PINK1Q9BXM7 581 aa17.86■□□□□ 0.45
TUBB4B-202ENST00000604929 DUSP22Q9NRW4 184 aa17.86■□□□□ 0.45
TUBB4B-202ENST00000604929 PDP2Q9P2J9 529 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms