RNA–Protein interactions for RNA: ENST00000604814.5

TUBE1-209, Transcript of tubulin epsilon 1, human

TSL 5

Gene TUBE1, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBE1-209	ENST00000604814	C19orf35	Q6ZS72	473 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	SHF	Q7M4L6	423 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	LNX2	Q8N448	690 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	OR1L6	Q8NGR2	347 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	SPATA22	Q8NHS9	363 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	ERMN	Q8TAM6	284 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	NANP	Q8TBE9	248 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	ZNF333	Q96JL9	665 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	ZNF514	Q96K75	400 aa	Predicted RBP	4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	SLC38A2	Q96QD8	506 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	MIS12	Q9H081	205 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	ACKR4	Q9NPB9	350 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	RBAK	Q9NYW8	714 aa	Predicted RBP	4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	DCDC2	Q9UHG0	476 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	UTS2R	Q9UKP6	389 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	IKZF2	Q9UKS7	526 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	LAMP3	Q9UQV4	416 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	POFUT2	Q9Y2G5	429 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	ZNF175	Q9Y473	711 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	OR1A2	Q9Y585	309 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	KPTN	Q9Y664	436 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	MROH7-TTC4	A0A0A0MT08	1334 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	ATP6AP2	A0A1C7CYW4	349 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	YJEFN3	A6XGL0	299 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814		A8MUA0	341 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	MT-ND2	P03891	347 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	COMT	P21964	271 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	STOM	P27105	288 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	MAP2K2	P36507	400 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	KCNJ3	P48549	501 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	CDC34	P49427	236 aa	Predicted RBP	4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	RGS19	P49795	217 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	SELENOP	P49908	381 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	CDH12	P55289	794 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	UBE2G2	P60604	165 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	SRY	Q05066	204 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	STX3	Q13277	289 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	PHKG1	Q16816	387 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	GPR33	Q49SQ1	333 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	SFT2D3	Q587I9	215 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	CDKL4	Q5MAI5	379 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	EOGT	Q5NDL2	527 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	OR52W1	Q6IF63	320 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	TMIGD1	Q6UXZ0	262 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	POLN	Q7Z5Q5	900 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	CLEC4F	Q8N1N0	589 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	PRSS35	Q8N3Z0	413 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	FGFRL1	Q8N441	504 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	ADAD2	Q8NCV1	583 aa	Known RBP	4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	NFAM1	Q8NET5	270 aa	Predicted RBP	4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	OR11H4	Q8NGC9	324 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	CCDC124	Q96CT7	223 aa	Known RBP	4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	C12orf42	Q96LP6	360 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	ADO	Q96SZ5	270 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	KXD1	Q9BQD3	176 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	CCDC3	Q9BQI4	270 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	C9orf16	Q9BUW7	83 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	C1QTNF7	Q9BXJ2	289 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	DUSP16	Q9BY84	665 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	ZNF665	Q9H7R5	613 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	ADAP2	Q9NPF8	381 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	SEMA4G	Q9NTN9	838 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	RNF146	Q9NTX7	359 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	LYAR	Q9NX58	379 aa	Known RBP	4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	ADA2	Q9NZK5	511 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	DAPK2	Q9UIK4	370 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814	TINAG	Q9UJW2	476 aa		4.88	□□□□□ -1.63
TUBE1-209	ENST00000604814		A0A1W2PP11	408 aa		4.87	□□□□□ -1.63
TUBE1-209	ENST00000604814	TCRBV5S1A1T	A0A578	114 aa		4.87	□□□□□ -1.63
TUBE1-209	ENST00000604814	MED19	A0JLT2	244 aa	Predicted RBP	4.87	□□□□□ -1.63
TUBE1-209	ENST00000604814	UNC119B	A6NIH7	251 aa		4.87	□□□□□ -1.63
TUBE1-209	ENST00000604814	TMEM210	A6NLX4	147 aa		4.87	□□□□□ -1.63
TUBE1-209	ENST00000604814	RNASET2	O00584	256 aa	Known RBP	4.87	□□□□□ -1.63
TUBE1-209	ENST00000604814	DVL1	O14640	695 aa		4.87	□□□□□ -1.63
TUBE1-209	ENST00000604814	ERLIN2	O94905	339 aa		4.87	□□□□□ -1.63
TUBE1-209	ENST00000604814	NDUFA10	O95299	355 aa		4.87	□□□□□ -1.63
TUBE1-209	ENST00000604814	BMP10	O95393	424 aa		4.87	□□□□□ -1.63
TUBE1-209	ENST00000604814	PLAU	P00749	431 aa		4.87	□□□□□ -1.63
TUBE1-209	ENST00000604814	UBC	P0CG48	685 aa	Known RBP	4.87	□□□□□ -1.63
TUBE1-209	ENST00000604814	ACP2	P11117	423 aa		4.87	□□□□□ -1.63
TUBE1-209	ENST00000604814	MMP11	P24347	488 aa		4.87	□□□□□ -1.63
TUBE1-209	ENST00000604814	PPP3CC	P48454	512 aa		4.87	□□□□□ -1.63
TUBE1-209	ENST00000604814	PSMD4	P55036	377 aa	Known RBP	4.87	□□□□□ -1.63
TUBE1-209	ENST00000604814	HNRNPH2	P55795	449 aa	Known RBP	4.87	□□□□□ -1.63
TUBE1-209	ENST00000604814	CEACAM7	Q14002	265 aa		4.87	□□□□□ -1.63
TUBE1-209	ENST00000604814	C18orf21	Q32NC0	220 aa	Predicted RBP	4.87	□□□□□ -1.63
TUBE1-209	ENST00000604814	TIGD2	Q4W5G0	525 aa		4.87	□□□□□ -1.63
TUBE1-209	ENST00000604814	RAB6C	Q53S08	254 aa		4.87	□□□□□ -1.63
TUBE1-209	ENST00000604814	THEM4	Q5T1C6	240 aa		4.87	□□□□□ -1.63
TUBE1-209	ENST00000604814	TMEM64	Q6YI46	380 aa		4.87	□□□□□ -1.63
TUBE1-209	ENST00000604814	C17orf107	Q6ZR85	190 aa		4.87	□□□□□ -1.63
TUBE1-209	ENST00000604814	DCXR	Q7Z4W1	244 aa		4.87	□□□□□ -1.63
TUBE1-209	ENST00000604814	C17orf78	Q8N4C9	275 aa		4.87	□□□□□ -1.63
TUBE1-209	ENST00000604814	CCDC197	Q8NCU1	140 aa		4.87	□□□□□ -1.63
TUBE1-209	ENST00000604814	PPFIBP2	Q8ND30	876 aa		4.87	□□□□□ -1.63
TUBE1-209	ENST00000604814	FBXO36	Q8NEA4	188 aa		4.87	□□□□□ -1.63
TUBE1-209	ENST00000604814	OR8J2	Q8NGG1	315 aa		4.87	□□□□□ -1.63
TUBE1-209	ENST00000604814	OR1F12	Q8NHA8	337 aa		4.87	□□□□□ -1.63
TUBE1-209	ENST00000604814	FGFBP3	Q8TAT2	258 aa		4.87	□□□□□ -1.63
TUBE1-209	ENST00000604814	ING5	Q8WYH8	240 aa		4.87	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms