RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 ZNF195O14628 629 aa14.43□□□□□ -0.1
RPS28-203ENST00000600659 KLF11O14901 512 aa14.43□□□□□ -0.1
RPS28-203ENST00000600659 COQ9O75208 318 aa14.43□□□□□ -0.1
RPS28-203ENST00000600659 ALDOCP09972 364 aaKnown RBP14.43□□□□□ -0.1
RPS28-203ENST00000600659 ENDOUP21128 410 aaKnown RBP14.43□□□□□ -0.1
RPS28-203ENST00000600659 CASP3P42574 277 aa14.43□□□□□ -0.1
RPS28-203ENST00000600659 PPIAP62937 165 aaKnown RBP14.43□□□□□ -0.1
RPS28-203ENST00000600659 ZNF155Q12901 538 aaPredicted RBP14.43□□□□□ -0.1
RPS28-203ENST00000600659 MLC1Q15049 377 aa14.43□□□□□ -0.1
RPS28-203ENST00000600659 HDXQ7Z353 690 aa14.43□□□□□ -0.1
RPS28-203ENST00000600659 R3HCC1LQ7Z5L2 792 aaKnown RBP14.43□□□□□ -0.1
RPS28-203ENST00000600659 WDR53Q7Z5U6 358 aaPredicted RBP14.43□□□□□ -0.1
RPS28-203ENST00000600659 CAMKMTQ7Z624 323 aa14.43□□□□□ -0.1
RPS28-203ENST00000600659 SPPL2CQ8IUH8 684 aa14.43□□□□□ -0.1
RPS28-203ENST00000600659 LRRC34Q8IZ02 419 aa14.43□□□□□ -0.1
RPS28-203ENST00000600659 KIRREL3Q8IZU9 778 aa14.43□□□□□ -0.1
RPS28-203ENST00000600659 FAM109AQ8N4B1 249 aa14.43□□□□□ -0.1
RPS28-203ENST00000600659 PSMA8Q8TAA3 256 aa14.43□□□□□ -0.1
RPS28-203ENST00000600659 DIO2Q92813 273 aa14.43□□□□□ -0.1
RPS28-203ENST00000600659 ZBED6CLQ96FA7 236 aaPredicted RBP14.43□□□□□ -0.1
RPS28-203ENST00000600659 LMF2Q9BU23 707 aaKnown RBP14.43□□□□□ -0.1
RPS28-203ENST00000600659 ZFP64Q9NPA5 681 aa14.43□□□□□ -0.1
RPS28-203ENST00000600659 DDX18Q9NVP1 670 aaKnown RBP14.43□□□□□ -0.1
RPS28-203ENST00000600659 TAS2R9Q9NYW1 312 aa14.43□□□□□ -0.1
RPS28-203ENST00000600659 NOP53Q9NZM5 478 aaKnown RBP14.43□□□□□ -0.1
RPS28-203ENST00000600659 MARCOQ9UEW3 520 aaPredicted RBP14.43□□□□□ -0.1
RPS28-203ENST00000600659 A0A1B0GTH9 108 aa14.42□□□□□ -0.1
RPS28-203ENST00000600659 OR6C70A6NIJ9 312 aa14.42□□□□□ -0.1
RPS28-203ENST00000600659 CAPN14A8MX76 684 aa14.42□□□□□ -0.1
RPS28-203ENST00000600659 TP53I11O14683 189 aa14.42□□□□□ -0.1
RPS28-203ENST00000600659 HPCAL1P37235 193 aa14.42□□□□□ -0.1
RPS28-203ENST00000600659 WNT3P56703 355 aa14.42□□□□□ -0.1
RPS28-203ENST00000600659 CLDN8P56748 225 aa14.42□□□□□ -0.1
RPS28-203ENST00000600659 KCNJ2P63252 427 aa14.42□□□□□ -0.1
RPS28-203ENST00000600659 PLGLB1Q02325 96 aa14.42□□□□□ -0.1
RPS28-203ENST00000600659 MAD2L1Q13257 205 aaPredicted RBP14.42□□□□□ -0.1
RPS28-203ENST00000600659 OGFOD2Q6N063 350 aa14.42□□□□□ -0.1
RPS28-203ENST00000600659 RGS9BPQ6ZS82 235 aa14.42□□□□□ -0.1
RPS28-203ENST00000600659 NUP54Q7Z3B4 507 aa14.42□□□□□ -0.1
RPS28-203ENST00000600659 SLC22A16Q86VW1 577 aa14.42□□□□□ -0.1
RPS28-203ENST00000600659 WDR75Q8IWA0 830 aaKnown RBP14.42□□□□□ -0.1
RPS28-203ENST00000600659 ZNF75CPQ92670 426 aaPredicted RBP14.42□□□□□ -0.1
RPS28-203ENST00000600659 MAELQ96JY0 434 aaKnown RBP14.42□□□□□ -0.1
RPS28-203ENST00000600659 RILPQ96NA2 401 aa14.42□□□□□ -0.1
RPS28-203ENST00000600659 DOHHQ9BU89 302 aa14.42□□□□□ -0.1
RPS28-203ENST00000600659 DEFB127Q9H1M4 99 aa14.42□□□□□ -0.1
RPS28-203ENST00000600659 UBQLN3Q9H347 655 aa14.42□□□□□ -0.1
RPS28-203ENST00000600659 ARGLU1Q9NWB6 273 aaPredicted RBP14.42□□□□□ -0.1
RPS28-203ENST00000600659 CACNA1CQ13936 2221 aa14.42□□□□□ -0.1
RPS28-203ENST00000600659 TRGV8A0A0C4DH27 118 aa14.41□□□□□ -0.1
RPS28-203ENST00000600659 A0A1B0GVC2 190 aa14.41□□□□□ -0.1
RPS28-203ENST00000600659 ACOT7O00154 380 aa14.41□□□□□ -0.1
RPS28-203ENST00000600659 SCN2BO60939 215 aa14.41□□□□□ -0.1
RPS28-203ENST00000600659 PRPS1L1P21108 318 aa14.41□□□□□ -0.1
RPS28-203ENST00000600659 MANFP55145 182 aaKnown RBP14.41□□□□□ -0.1
RPS28-203ENST00000600659 PHC1P78364 1004 aa14.41□□□□□ -0.1
RPS28-203ENST00000600659 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.41□□□□□ -0.1
RPS28-203ENST00000600659 EMC4Q5J8M3 183 aa14.41□□□□□ -0.1
RPS28-203ENST00000600659 TBCELQ5QJ74 424 aa14.41□□□□□ -0.1
RPS28-203ENST00000600659 FJX1Q86VR8 437 aa14.41□□□□□ -0.1
RPS28-203ENST00000600659 SLC44A2Q8IWA5 706 aaPredicted RBP14.41□□□□□ -0.1
RPS28-203ENST00000600659 ZFP28Q8NHY6 868 aa14.41□□□□□ -0.1
RPS28-203ENST00000600659 FAM120BQ96EK7 910 aaKnown RBP14.41□□□□□ -0.1
RPS28-203ENST00000600659 TMEM41AQ96HV5 264 aa14.41□□□□□ -0.1
RPS28-203ENST00000600659 MAGED4Q96JG8 741 aa14.41□□□□□ -0.1
RPS28-203ENST00000600659 WDR55Q9H6Y2 383 aaPredicted RBP14.41□□□□□ -0.1
RPS28-203ENST00000600659 GALNT9Q9HCQ5 603 aa14.41□□□□□ -0.1
RPS28-203ENST00000600659 ZNF446Q9NWS9 450 aa14.41□□□□□ -0.1
RPS28-203ENST00000600659 BOKQ9UMX3 212 aaPredicted RBP14.41□□□□□ -0.1
RPS28-203ENST00000600659 EIF3LQ9Y262 564 aaKnown RBP14.41□□□□□ -0.1
RPS28-203ENST00000600659 ARHGAP21Q5T5U3 1957 aa14.41□□□□□ -0.1
RPS28-203ENST00000600659 C17orf51A8MQB3 221 aa14.41□□□□□ -0.1
RPS28-203ENST00000600659 HDAC3O15379 428 aa14.41□□□□□ -0.1
RPS28-203ENST00000600659 CDC40O60508 579 aaKnown RBP eCLIP14.41□□□□□ -0.1
RPS28-203ENST00000600659 PDE9AO76083 593 aa14.41□□□□□ -0.1
RPS28-203ENST00000600659 ACP2P11117 423 aa14.41□□□□□ -0.1
RPS28-203ENST00000600659 LBPP18428 481 aa14.41□□□□□ -0.1
RPS28-203ENST00000600659 RPL3P39023 403 aaKnown RBP14.41□□□□□ -0.1
RPS28-203ENST00000600659 GAS1P54826 345 aa14.41□□□□□ -0.1
RPS28-203ENST00000600659 RBPJQ06330 500 aa14.41□□□□□ -0.1
RPS28-203ENST00000600659 GAB1Q13480 694 aa14.41□□□□□ -0.1
RPS28-203ENST00000600659 CPTPQ5TA50 214 aa14.41□□□□□ -0.1
RPS28-203ENST00000600659 ATG16L1Q676U5 607 aa14.41□□□□□ -0.1
RPS28-203ENST00000600659 NCCRP1Q6ZVX7 275 aaPredicted RBP14.41□□□□□ -0.1
RPS28-203ENST00000600659 TRILQ7L0X0 811 aa14.41□□□□□ -0.1
RPS28-203ENST00000600659 DOLPP1Q86YN1 238 aa14.41□□□□□ -0.1
RPS28-203ENST00000600659 TRIM42Q8IWZ5 723 aa14.41□□□□□ -0.1
RPS28-203ENST00000600659 NUP43Q8NFH3 380 aa14.41□□□□□ -0.1
RPS28-203ENST00000600659 EFHD2Q96C19 240 aaPredicted RBP14.41□□□□□ -0.1
RPS28-203ENST00000600659 CCDC120Q96HB5 630 aa14.41□□□□□ -0.1
RPS28-203ENST00000600659 TEX37Q96LM6 180 aa14.41□□□□□ -0.1
RPS28-203ENST00000600659 ZNF597Q96LX8 424 aa14.41□□□□□ -0.1
RPS28-203ENST00000600659 COL21A1Q96P44 957 aa14.41□□□□□ -0.1
RPS28-203ENST00000600659 PHF12Q96QT6 1004 aa14.41□□□□□ -0.1
RPS28-203ENST00000600659 ADOQ96SZ5 270 aa14.41□□□□□ -0.1
RPS28-203ENST00000600659 BHLHE41Q9C0J9 482 aaPredicted RBP14.41□□□□□ -0.1
RPS28-203ENST00000600659 CXorf36Q9H7Y0 433 aa14.41□□□□□ -0.1
RPS28-203ENST00000600659 AIG1Q9NVV5 245 aa14.41□□□□□ -0.1
RPS28-203ENST00000600659 FLRT3Q9NZU0 649 aa14.41□□□□□ -0.1
RPS28-203ENST00000600659 SH3BGRL2Q9UJC5 107 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms