RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 PRM3Q9NNZ6 103 aa12.8□□□□□ -0.36
SHKBP1-218ENST00000598907 B4GALT7Q9UBV7 327 aa12.8□□□□□ -0.36
SHKBP1-218ENST00000598907 TRIM33Q9UPN9 1127 aa12.8□□□□□ -0.36
SHKBP1-218ENST00000598907 EIF3LQ9Y262 564 aaKnown RBP12.8□□□□□ -0.36
SHKBP1-218ENST00000598907 WBP11Q9Y2W2 641 aaKnown RBP12.8□□□□□ -0.36
SHKBP1-218ENST00000598907 A0A1W2PPR1 153 aa12.79□□□□□ -0.36
SHKBP1-218ENST00000598907 SYT5O00445 386 aa12.79□□□□□ -0.36
SHKBP1-218ENST00000598907 BCKDKO14874 412 aa12.79□□□□□ -0.36
SHKBP1-218ENST00000598907 GBAP04062 536 aa12.79□□□□□ -0.36
SHKBP1-218ENST00000598907 FAM58BPP0C7Q3 252 aa12.79□□□□□ -0.36
SHKBP1-218ENST00000598907 G6PDP11413 515 aa12.79□□□□□ -0.36
SHKBP1-218ENST00000598907 NID1P14543 1247 aa12.79□□□□□ -0.36
SHKBP1-218ENST00000598907 IDO1P14902 403 aa12.79□□□□□ -0.36
SHKBP1-218ENST00000598907 BMP7P18075 431 aa12.79□□□□□ -0.36
SHKBP1-218ENST00000598907 CERS1P27544 350 aa12.79□□□□□ -0.36
SHKBP1-218ENST00000598907 MLF1P58340 268 aa12.79□□□□□ -0.36
SHKBP1-218ENST00000598907 C21orf58P58505 322 aa12.79□□□□□ -0.36
SHKBP1-218ENST00000598907 PPIAP62937 165 aaKnown RBP12.79□□□□□ -0.36
SHKBP1-218ENST00000598907 SKP1P63208 163 aa12.79□□□□□ -0.36
SHKBP1-218ENST00000598907 ZNF763Q0D2J5 394 aa12.79□□□□□ -0.36
SHKBP1-218ENST00000598907 NSDHLQ15738 373 aa12.79□□□□□ -0.36
SHKBP1-218ENST00000598907 PDCD4Q53EL6 469 aaKnown RBP12.79□□□□□ -0.36
SHKBP1-218ENST00000598907 PODNL1Q6PEZ8 512 aa12.79□□□□□ -0.36
SHKBP1-218ENST00000598907 CYP20A1Q6UW02 462 aa12.79□□□□□ -0.36
SHKBP1-218ENST00000598907 MDGA2Q7Z553 956 aa12.79□□□□□ -0.36
SHKBP1-218ENST00000598907 CA13Q8N1Q1 262 aa12.79□□□□□ -0.36
SHKBP1-218ENST00000598907 LIX1Q8N485 282 aa12.79□□□□□ -0.36
SHKBP1-218ENST00000598907 CCDC197Q8NCU1 140 aa12.79□□□□□ -0.36
SHKBP1-218ENST00000598907 OR51Q1Q8NH59 317 aa12.79□□□□□ -0.36
SHKBP1-218ENST00000598907 C16orf78Q8WTQ4 265 aa12.79□□□□□ -0.36
SHKBP1-218ENST00000598907 TM4SF18Q96CE8 201 aa12.79□□□□□ -0.36
SHKBP1-218ENST00000598907 LRRC46Q96FV0 321 aa12.79□□□□□ -0.36
SHKBP1-218ENST00000598907 EGLN2Q96KS0 407 aa12.79□□□□□ -0.36
SHKBP1-218ENST00000598907 CNPPD1Q9BV87 410 aa12.79□□□□□ -0.36
SHKBP1-218ENST00000598907 EBPLQ9BY08 206 aa12.79□□□□□ -0.36
SHKBP1-218ENST00000598907 MYLK2Q9H1R3 596 aa12.79□□□□□ -0.36
SHKBP1-218ENST00000598907 COPS7BQ9H9Q2 264 aaPredicted RBP12.79□□□□□ -0.36
SHKBP1-218ENST00000598907 LYRM4Q9HD34 91 aa12.79□□□□□ -0.36
SHKBP1-218ENST00000598907 MYNNQ9NPC7 610 aa12.79□□□□□ -0.36
SHKBP1-218ENST00000598907 SAR1AQ9NR31 198 aa12.79□□□□□ -0.36
SHKBP1-218ENST00000598907 SDR39U1Q9NRG7 319 aaPredicted RBP12.79□□□□□ -0.36
SHKBP1-218ENST00000598907 LYARQ9NX58 379 aaKnown RBP12.79□□□□□ -0.36
SHKBP1-218ENST00000598907 BAIAP2L1Q9UHR4 511 aa12.79□□□□□ -0.36
SHKBP1-218ENST00000598907 DAPP1Q9UN19 280 aa12.79□□□□□ -0.36
SHKBP1-218ENST00000598907 EXO1Q9UQ84 846 aaKnown RBP12.79□□□□□ -0.36
SHKBP1-218ENST00000598907 PINLYPA6NC86 204 aa12.78□□□□□ -0.36
SHKBP1-218ENST00000598907 SGK494L7N484 410 aa12.78□□□□□ -0.36
SHKBP1-218ENST00000598907 ACOT7O00154 380 aa12.78□□□□□ -0.36
SHKBP1-218ENST00000598907 FCHO1O14526 889 aa12.78□□□□□ -0.36
SHKBP1-218ENST00000598907 B3GALT2O43825 422 aa12.78□□□□□ -0.36
SHKBP1-218ENST00000598907 EPXP11678 715 aa12.78□□□□□ -0.36
SHKBP1-218ENST00000598907 GPX3P22352 226 aa12.78□□□□□ -0.36
SHKBP1-218ENST00000598907 ASMTP46597 345 aa12.78□□□□□ -0.36
SHKBP1-218ENST00000598907 MAPK12P53778 367 aa12.78□□□□□ -0.36
SHKBP1-218ENST00000598907 LIM2P55344 173 aa12.78□□□□□ -0.36
SHKBP1-218ENST00000598907 HNRNPH2P55795 449 aaKnown RBP12.78□□□□□ -0.36
SHKBP1-218ENST00000598907 CLDN8P56748 225 aa12.78□□□□□ -0.36
SHKBP1-218ENST00000598907 OR4D2P58180 307 aa12.78□□□□□ -0.36
SHKBP1-218ENST00000598907 FAM71E1Q6IPT2 247 aa12.78□□□□□ -0.36
SHKBP1-218ENST00000598907 RIMKLAQ8IXN7 391 aa12.78□□□□□ -0.36
SHKBP1-218ENST00000598907 FAM9CQ8IZT9 166 aa12.78□□□□□ -0.36
SHKBP1-218ENST00000598907 OR5T3Q8NGG3 340 aa12.78□□□□□ -0.36
SHKBP1-218ENST00000598907 MARK4Q96L34 752 aa12.78□□□□□ -0.36
SHKBP1-218ENST00000598907 MAPKAP1Q9BPZ7 522 aa12.78□□□□□ -0.36
SHKBP1-218ENST00000598907 TRIM45Q9H8W5 580 aaPredicted RBP12.78□□□□□ -0.36
SHKBP1-218ENST00000598907 TMEM45AQ9NWC5 275 aa12.78□□□□□ -0.36
SHKBP1-218ENST00000598907 ZIM2Q9NZV7 527 aa12.78□□□□□ -0.36
SHKBP1-218ENST00000598907 GNG14A0A1W2PPG7 69 aa12.77□□□□□ -0.37
SHKBP1-218ENST00000598907 A0A1W2PR48 441 aa12.77□□□□□ -0.37
SHKBP1-218ENST00000598907 ZNF860A6NHJ4 632 aa12.77□□□□□ -0.37
SHKBP1-218ENST00000598907 G3V3Y1 287 aa12.77□□□□□ -0.37
SHKBP1-218ENST00000598907 CYR61O00622 381 aa12.77□□□□□ -0.37
SHKBP1-218ENST00000598907 CHST10O43529 356 aa12.77□□□□□ -0.37
SHKBP1-218ENST00000598907 CCDC22O60826 627 aa12.77□□□□□ -0.37
SHKBP1-218ENST00000598907 RDH16O75452 317 aa12.77□□□□□ -0.37
SHKBP1-218ENST00000598907 IFNA2P01563 188 aa12.77□□□□□ -0.37
SHKBP1-218ENST00000598907 CYC1P08574 325 aa12.77□□□□□ -0.37
SHKBP1-218ENST00000598907 NCF2P19878 526 aaPredicted RBP12.77□□□□□ -0.37
SHKBP1-218ENST00000598907 JAK1P23458 1154 aa12.77□□□□□ -0.37
SHKBP1-218ENST00000598907 TRHRP34981 398 aaPredicted RBP12.77□□□□□ -0.37
SHKBP1-218ENST00000598907 SQLEQ14534 574 aa12.77□□□□□ -0.37
SHKBP1-218ENST00000598907 PTGR1Q14914 329 aa12.77□□□□□ -0.37
SHKBP1-218ENST00000598907 IKBIPQ70UQ0 350 aa12.77□□□□□ -0.37
SHKBP1-218ENST00000598907 MTDHQ86UE4 582 aaKnown RBP12.77□□□□□ -0.37
SHKBP1-218ENST00000598907 GPR180Q86V85 440 aa12.77□□□□□ -0.37
SHKBP1-218ENST00000598907 ULK2Q8IYT8 1036 aa12.77□□□□□ -0.37
SHKBP1-218ENST00000598907 ELP5Q8TE02 316 aa12.77□□□□□ -0.37
SHKBP1-218ENST00000598907 TSSK3Q96PN8 268 aa12.77□□□□□ -0.37
SHKBP1-218ENST00000598907 NMUR2Q9GZQ4 415 aa12.77□□□□□ -0.37
SHKBP1-218ENST00000598907 PRDM9Q9NQV7 894 aa12.77□□□□□ -0.37
SHKBP1-218ENST00000598907 DEPPQ9NTK1 212 aa12.77□□□□□ -0.37
SHKBP1-218ENST00000598907 MRGBPQ9NV56 204 aa12.77□□□□□ -0.37
SHKBP1-218ENST00000598907 TEX10Q9NXF1 929 aaPredicted RBP12.77□□□□□ -0.37
SHKBP1-218ENST00000598907 MS4A12Q9NXJ0 267 aa12.77□□□□□ -0.37
SHKBP1-218ENST00000598907 PHF11Q9UIL8 331 aa12.77□□□□□ -0.37
SHKBP1-218ENST00000598907 ACAD8Q9UKU7 415 aa12.77□□□□□ -0.37
SHKBP1-218ENST00000598907 ATG4BQ9Y4P1 393 aa12.77□□□□□ -0.37
SHKBP1-218ENST00000598907 A0A0G2JMM0 328 aa12.76□□□□□ -0.37
SHKBP1-218ENST00000598907 A0A1W2PPB8 328 aa12.76□□□□□ -0.37
SHKBP1-218ENST00000598907 A0A1W2PRS3 328 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms