RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 ZNF155Q12901 538 aaPredicted RBP10.22□□□□□ -0.77
VRK3-210ENST00000596121 RPS6KA2Q15349 733 aa10.22□□□□□ -0.77
VRK3-210ENST00000596121 C3AR1Q16581 482 aa10.22□□□□□ -0.77
VRK3-210ENST00000596121 CPTPQ5TA50 214 aa10.22□□□□□ -0.77
VRK3-210ENST00000596121 NUP54Q7Z3B4 507 aa10.22□□□□□ -0.77
VRK3-210ENST00000596121 R3HCC1LQ7Z5L2 792 aaKnown RBP10.22□□□□□ -0.77
VRK3-210ENST00000596121 DND1Q8IYX4 353 aaKnown RBP10.22□□□□□ -0.77
VRK3-210ENST00000596121 SLC34A3Q8N130 599 aa10.22□□□□□ -0.77
VRK3-210ENST00000596121 DIO2Q92813 273 aa10.22□□□□□ -0.77
VRK3-210ENST00000596121 HOXB13Q92826 284 aaPredicted RBP10.22□□□□□ -0.77
VRK3-210ENST00000596121 RELTQ969Z4 430 aa10.22□□□□□ -0.77
VRK3-210ENST00000596121 RILPQ96NA2 401 aa10.22□□□□□ -0.77
VRK3-210ENST00000596121 OR52B2Q96RD2 323 aa10.22□□□□□ -0.77
VRK3-210ENST00000596121 LMF2Q9BU23 707 aaKnown RBP10.22□□□□□ -0.77
VRK3-210ENST00000596121 CXorf36Q9H7Y0 433 aa10.22□□□□□ -0.77
VRK3-210ENST00000596121 IL1RL2Q9HB29 575 aa10.22□□□□□ -0.77
VRK3-210ENST00000596121 DDX18Q9NVP1 670 aaKnown RBP10.22□□□□□ -0.77
VRK3-210ENST00000596121 TAS2R9Q9NYW1 312 aa10.22□□□□□ -0.77
VRK3-210ENST00000596121 NOP53Q9NZM5 478 aaKnown RBP10.22□□□□□ -0.77
VRK3-210ENST00000596121 FLRT3Q9NZU0 649 aa10.22□□□□□ -0.77
VRK3-210ENST00000596121 NCKAP5O14513 1909 aa10.22□□□□□ -0.77
VRK3-210ENST00000596121 GTF3C1Q12789 2109 aa10.22□□□□□ -0.77
VRK3-210ENST00000596121 DNAJC13O75165 2243 aa10.21□□□□□ -0.77
VRK3-210ENST00000596121 A0A1B0GTH9 108 aa10.21□□□□□ -0.77
VRK3-210ENST00000596121 A0A1W2PRB8 838 aa10.21□□□□□ -0.77
VRK3-210ENST00000596121 HMGB1P1B2RPK0 211 aaPredicted RBP10.21□□□□□ -0.77
VRK3-210ENST00000596121 C9JVG2 144 aa10.21□□□□□ -0.77
VRK3-210ENST00000596121 TP53I11O14683 189 aa10.21□□□□□ -0.77
VRK3-210ENST00000596121 SLC19A2O60779 497 aa10.21□□□□□ -0.77
VRK3-210ENST00000596121 REM1O75628 298 aa10.21□□□□□ -0.77
VRK3-210ENST00000596121 SLITRK5O94991 958 aa10.21□□□□□ -0.77
VRK3-210ENST00000596121 AGFG2O95081 481 aa10.21□□□□□ -0.77
VRK3-210ENST00000596121 C6orf47O95873 294 aa10.21□□□□□ -0.77
VRK3-210ENST00000596121 LDLRP01130 860 aa10.21□□□□□ -0.77
VRK3-210ENST00000596121 IGKV1D-16P01601 117 aa10.21□□□□□ -0.77
VRK3-210ENST00000596121 C1QCP02747 245 aa10.21□□□□□ -0.77
VRK3-210ENST00000596121 IFI6P09912 130 aa10.21□□□□□ -0.77
VRK3-210ENST00000596121 ACP2P11117 423 aa10.21□□□□□ -0.77
VRK3-210ENST00000596121 CYP4B1P13584 511 aa10.21□□□□□ -0.77
VRK3-210ENST00000596121 IL12AP29459 219 aa10.21□□□□□ -0.77
VRK3-210ENST00000596121 GPC1P35052 558 aa10.21□□□□□ -0.77
VRK3-210ENST00000596121 NME5P56597 212 aa10.21□□□□□ -0.77
VRK3-210ENST00000596121 UFM1P61960 85 aa10.21□□□□□ -0.77
VRK3-210ENST00000596121 PPP2R2AP63151 447 aa10.21□□□□□ -0.77
VRK3-210ENST00000596121 KCNJ2P63252 427 aa10.21□□□□□ -0.77
VRK3-210ENST00000596121 MAD2L1Q13257 205 aaPredicted RBP10.21□□□□□ -0.77
VRK3-210ENST00000596121 MLC1Q15049 377 aa10.21□□□□□ -0.77
VRK3-210ENST00000596121 PGS1Q32NB8 556 aa10.21□□□□□ -0.77
VRK3-210ENST00000596121 C4orf17Q53FE4 359 aa10.21□□□□□ -0.77
VRK3-210ENST00000596121 EMC4Q5J8M3 183 aa10.21□□□□□ -0.77
VRK3-210ENST00000596121 TMEM198Q66K66 360 aa10.21□□□□□ -0.77
VRK3-210ENST00000596121 OR4F3Q6IEY1 312 aa10.21□□□□□ -0.77
VRK3-210ENST00000596121 OGFOD2Q6N063 350 aa10.21□□□□□ -0.77
VRK3-210ENST00000596121 GK5Q6ZS86 529 aa10.21□□□□□ -0.77
VRK3-210ENST00000596121 NCCRP1Q6ZVX7 275 aaPredicted RBP10.21□□□□□ -0.77
VRK3-210ENST00000596121 CAMKMTQ7Z624 323 aa10.21□□□□□ -0.77
VRK3-210ENST00000596121 SPPL2CQ8IUH8 684 aa10.21□□□□□ -0.77
VRK3-210ENST00000596121 TRIM42Q8IWZ5 723 aa10.21□□□□□ -0.77
VRK3-210ENST00000596121 CLECL1Q8IZS7 167 aa10.21□□□□□ -0.77
VRK3-210ENST00000596121 CLEC4FQ8N1N0 589 aa10.21□□□□□ -0.77
VRK3-210ENST00000596121 NUP43Q8NFH3 380 aa10.21□□□□□ -0.77
VRK3-210ENST00000596121 PSMA8Q8TAA3 256 aa10.21□□□□□ -0.77
VRK3-210ENST00000596121 FBXO30Q8TB52 745 aa10.21□□□□□ -0.77
VRK3-210ENST00000596121 RNF138Q8WVD3 245 aa10.21□□□□□ -0.77
VRK3-210ENST00000596121 PIK3R3Q92569 461 aa10.21□□□□□ -0.77
VRK3-210ENST00000596121 EFHD2Q96C19 240 aaPredicted RBP10.21□□□□□ -0.77
VRK3-210ENST00000596121 FAM120BQ96EK7 910 aaKnown RBP10.21□□□□□ -0.77
VRK3-210ENST00000596121 ZBED6CLQ96FA7 236 aaPredicted RBP10.21□□□□□ -0.77
VRK3-210ENST00000596121 OTUB1Q96FW1 271 aaPredicted RBP10.21□□□□□ -0.77
VRK3-210ENST00000596121 SLC35A4Q96G79 324 aa10.21□□□□□ -0.77
VRK3-210ENST00000596121 MAELQ96JY0 434 aaKnown RBP10.21□□□□□ -0.77
VRK3-210ENST00000596121 COL21A1Q96P44 957 aa10.21□□□□□ -0.77
VRK3-210ENST00000596121 ADOQ96SZ5 270 aa10.21□□□□□ -0.77
VRK3-210ENST00000596121 SECISBP2Q96T21 854 aaKnown RBP10.21□□□□□ -0.77
VRK3-210ENST00000596121 DOHHQ9BU89 302 aa10.21□□□□□ -0.77
VRK3-210ENST00000596121 DUSP26Q9BV47 211 aa10.21□□□□□ -0.77
VRK3-210ENST00000596121 RTN4RQ9BZR6 473 aa10.21□□□□□ -0.77
VRK3-210ENST00000596121 BHLHE41Q9C0J9 482 aaPredicted RBP10.21□□□□□ -0.77
VRK3-210ENST00000596121 GALNT9Q9HCQ5 603 aa10.21□□□□□ -0.77
VRK3-210ENST00000596121 ZFP64Q9NPA5 681 aa10.21□□□□□ -0.77
VRK3-210ENST00000596121 EQTNQ9NQ60 294 aa10.21□□□□□ -0.77
VRK3-210ENST00000596121 RYDENQ9NUL5 291 aaKnown RBP10.21□□□□□ -0.77
VRK3-210ENST00000596121 AIG1Q9NVV5 245 aa10.21□□□□□ -0.77
VRK3-210ENST00000596121 TINAGQ9UJW2 476 aa10.21□□□□□ -0.77
VRK3-210ENST00000596121 SLC5A6Q9Y289 635 aa10.21□□□□□ -0.77
VRK3-210ENST00000596121 GPR45Q9Y5Y3 372 aa10.21□□□□□ -0.77
VRK3-210ENST00000596121 SETXQ7Z333 2677 aaKnown RBP10.21□□□□□ -0.78
VRK3-210ENST00000596121 ICE1Q9Y2F5 2266 aa10.21□□□□□ -0.78
VRK3-210ENST00000596121 SPTBN1Q01082 2364 aaKnown RBP10.21□□□□□ -0.78
VRK3-210ENST00000596121 TRGV8A0A0C4DH27 118 aa10.2□□□□□ -0.78
VRK3-210ENST00000596121 OR6C70A6NIJ9 312 aa10.2□□□□□ -0.78
VRK3-210ENST00000596121 CAPN14A8MX76 684 aa10.2□□□□□ -0.78
VRK3-210ENST00000596121 EMC8O43402 210 aa10.2□□□□□ -0.78
VRK3-210ENST00000596121 CDC40O60508 579 aaKnown RBP eCLIP10.2□□□□□ -0.78
VRK3-210ENST00000596121 ICOSLGO75144 302 aa10.2□□□□□ -0.78
VRK3-210ENST00000596121 COQ9O75208 318 aa10.2□□□□□ -0.78
VRK3-210ENST00000596121 NKX2-2O95096 273 aa10.2□□□□□ -0.78
VRK3-210ENST00000596121 IGHG3P01860 377 aa10.2□□□□□ -0.78
VRK3-210ENST00000596121 ENDOUP21128 410 aaKnown RBP10.2□□□□□ -0.78
VRK3-210ENST00000596121 GABRA3P34903 492 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms