RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 HYAL4Q2M3T9 481 aa13.36□□□□□ -0.27
VRK3-206ENST00000594090 SLC9B1Q4ZJI4 515 aa13.36□□□□□ -0.27
VRK3-206ENST00000594090 TMEM81Q6P7N7 255 aa13.36□□□□□ -0.27
VRK3-206ENST00000594090 SZRD1Q7Z422 152 aa13.36□□□□□ -0.27
VRK3-206ENST00000594090 SPATA19Q7Z5L4 167 aa13.36□□□□□ -0.27
VRK3-206ENST00000594090 TMEM251Q8N6I4 163 aa13.36□□□□□ -0.27
VRK3-206ENST00000594090 NUP43Q8NFH3 380 aa13.36□□□□□ -0.27
VRK3-206ENST00000594090 OR4N2Q8NGD1 307 aa13.36□□□□□ -0.27
VRK3-206ENST00000594090 OR52N2Q8NGI0 321 aa13.36□□□□□ -0.27
VRK3-206ENST00000594090 OR5P2Q8WZ92 322 aa13.36□□□□□ -0.27
VRK3-206ENST00000594090 GIMAP5Q96F15 307 aa13.36□□□□□ -0.27
VRK3-206ENST00000594090 SLC35A4Q96G79 324 aa13.36□□□□□ -0.27
VRK3-206ENST00000594090 ZNF597Q96LX8 424 aa13.36□□□□□ -0.27
VRK3-206ENST00000594090 RILPQ96NA2 401 aa13.36□□□□□ -0.27
VRK3-206ENST00000594090 COL21A1Q96P44 957 aa13.36□□□□□ -0.27
VRK3-206ENST00000594090 MS4A4EQ96PG1 132 aa13.36□□□□□ -0.27
VRK3-206ENST00000594090 NODALQ96S42 347 aa13.36□□□□□ -0.27
VRK3-206ENST00000594090 ANGPTL4Q9BY76 406 aa13.36□□□□□ -0.27
VRK3-206ENST00000594090 ZDHHC11Q9H8X9 412 aa13.36□□□□□ -0.27
VRK3-206ENST00000594090 C3orf14Q9HBI5 128 aa13.36□□□□□ -0.27
VRK3-206ENST00000594090 NEUROD4Q9HD90 331 aa13.36□□□□□ -0.27
VRK3-206ENST00000594090 SLCO1B3Q9NPD5 702 aa13.36□□□□□ -0.27
VRK3-206ENST00000594090 EQTNQ9NQ60 294 aa13.36□□□□□ -0.27
VRK3-206ENST00000594090 PLSCR2Q9NRY7 297 aa13.36□□□□□ -0.27
VRK3-206ENST00000594090 AIG1Q9NVV5 245 aa13.36□□□□□ -0.27
VRK3-206ENST00000594090 SLC5A6Q9Y289 635 aa13.36□□□□□ -0.27
VRK3-206ENST00000594090 OR10H1Q9Y4A9 318 aa13.36□□□□□ -0.27
VRK3-206ENST00000594090 PRRC2CQ9Y520 2896 aaKnown RBP13.35□□□□□ -0.27
VRK3-206ENST00000594090 EMC8O43402 210 aa13.35□□□□□ -0.27
VRK3-206ENST00000594090 CDC40O60508 579 aaKnown RBP eCLIP13.35□□□□□ -0.27
VRK3-206ENST00000594090 SLC19A2O60779 497 aa13.35□□□□□ -0.27
VRK3-206ENST00000594090 ABCB7O75027 752 aa13.35□□□□□ -0.27
VRK3-206ENST00000594090 TRIM3O75382 744 aaPredicted RBP13.35□□□□□ -0.27
VRK3-206ENST00000594090 REM1O75628 298 aa13.35□□□□□ -0.27
VRK3-206ENST00000594090 SNX4O95219 450 aa13.35□□□□□ -0.27
VRK3-206ENST00000594090 C6orf47O95873 294 aa13.35□□□□□ -0.27
VRK3-206ENST00000594090 IL12BP29460 328 aa13.35□□□□□ -0.27
VRK3-206ENST00000594090 KRT20P35900 424 aa13.35□□□□□ -0.27
VRK3-206ENST00000594090 MAGEA5P43359 124 aa13.35□□□□□ -0.27
VRK3-206ENST00000594090 PRKAG1P54619 331 aa13.35□□□□□ -0.27
VRK3-206ENST00000594090 PGS1Q32NB8 556 aa13.35□□□□□ -0.27
VRK3-206ENST00000594090 CYP27C1Q4G0S4 372 aa13.35□□□□□ -0.27
VRK3-206ENST00000594090 C4orf17Q53FE4 359 aa13.35□□□□□ -0.27
VRK3-206ENST00000594090 OR4F3Q6IEY1 312 aa13.35□□□□□ -0.27
VRK3-206ENST00000594090 CHERPQ8IWX8 916 aaKnown RBP13.35□□□□□ -0.27
VRK3-206ENST00000594090 FAM109AQ8N4B1 249 aa13.35□□□□□ -0.27
VRK3-206ENST00000594090 OR8J2Q8NGG1 315 aa13.35□□□□□ -0.27
VRK3-206ENST00000594090 CEP70Q8NHQ1 597 aa13.35□□□□□ -0.27
VRK3-206ENST00000594090 PSMA8Q8TAA3 256 aa13.35□□□□□ -0.27
VRK3-206ENST00000594090 HOXB13Q92826 284 aaPredicted RBP13.35□□□□□ -0.27
VRK3-206ENST00000594090 NTNG2Q96CW9 530 aa13.35□□□□□ -0.27
VRK3-206ENST00000594090 FAM120BQ96EK7 910 aaKnown RBP13.35□□□□□ -0.27
VRK3-206ENST00000594090 JSRP1Q96MG2 331 aaPredicted RBP13.35□□□□□ -0.27
VRK3-206ENST00000594090 ADOQ96SZ5 270 aa13.35□□□□□ -0.27
VRK3-206ENST00000594090 OSBPL11Q9BXB4 747 aa13.35□□□□□ -0.27
VRK3-206ENST00000594090 DEFB127Q9H1M4 99 aa13.35□□□□□ -0.27
VRK3-206ENST00000594090 ZNF703Q9H7S9 590 aaPredicted RBP13.35□□□□□ -0.27
VRK3-206ENST00000594090 METTL7AQ9H8H3 244 aa13.35□□□□□ -0.27
VRK3-206ENST00000594090 Q9N2J8 555 aa13.35□□□□□ -0.27
VRK3-206ENST00000594090 ZFP64Q9NPA5 681 aa13.35□□□□□ -0.27
VRK3-206ENST00000594090 ERRFI1Q9UJM3 462 aaPredicted RBP13.35□□□□□ -0.27
VRK3-206ENST00000594090 ZNF835Q9Y2P0 537 aa13.35□□□□□ -0.27
VRK3-206ENST00000594090 SNX8Q9Y5X2 465 aa13.35□□□□□ -0.27
VRK3-206ENST00000594090 USH1CQ9Y6N9 552 aa13.35□□□□□ -0.27
VRK3-206ENST00000594090 BAHCC1Q9P281 2608 aa13.35□□□□□ -0.27
VRK3-206ENST00000594090 SVILO95425 2214 aa13.35□□□□□ -0.27
VRK3-206ENST00000594090 ZGRF1Q86YA3 2104 aa13.35□□□□□ -0.27
VRK3-206ENST00000594090 PRAMEF25A6NGN4 478 aa13.34□□□□□ -0.27
VRK3-206ENST00000594090 TTC36A6NLP5 189 aa13.34□□□□□ -0.27
VRK3-206ENST00000594090 PTGDSP41222 190 aa13.34□□□□□ -0.27
VRK3-206ENST00000594090 MAP3K8P41279 467 aa13.34□□□□□ -0.27
VRK3-206ENST00000594090 KIR3DL1P43629 444 aa13.34□□□□□ -0.27
VRK3-206ENST00000594090 CLNS1AP54105 237 aaKnown RBP13.34□□□□□ -0.27
VRK3-206ENST00000594090 PRR5P85299 388 aa13.34□□□□□ -0.27
VRK3-206ENST00000594090 GAB1Q13480 694 aa13.34□□□□□ -0.27
VRK3-206ENST00000594090 EFR3AQ14156 821 aa13.34□□□□□ -0.27
VRK3-206ENST00000594090 DPY19L1Q2PZI1 675 aa13.34□□□□□ -0.27
VRK3-206ENST00000594090 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.34□□□□□ -0.27
VRK3-206ENST00000594090 LSM12Q3MHD2 195 aaKnown RBP13.34□□□□□ -0.27
VRK3-206ENST00000594090 C1QL3Q5VWW1 255 aa13.34□□□□□ -0.27
VRK3-206ENST00000594090 NXNQ6DKJ4 435 aa13.34□□□□□ -0.27
VRK3-206ENST00000594090 MFSD12Q6NUT3 480 aa13.34□□□□□ -0.27
VRK3-206ENST00000594090 Q6ZPB1 254 aaPredicted RBP13.34□□□□□ -0.27
VRK3-206ENST00000594090 SPPL2CQ8IUH8 684 aa13.34□□□□□ -0.27
VRK3-206ENST00000594090 CDRT4Q8N9R6 151 aa13.34□□□□□ -0.27
VRK3-206ENST00000594090 ACTRT2Q8TDY3 377 aa13.34□□□□□ -0.27
VRK3-206ENST00000594090 CKAP2Q8WWK9 683 aa13.34□□□□□ -0.27
VRK3-206ENST00000594090 TESCQ96BS2 214 aa13.34□□□□□ -0.27
VRK3-206ENST00000594090 EFHD2Q96C19 240 aaPredicted RBP13.34□□□□□ -0.27
VRK3-206ENST00000594090 TMCO6Q96DC7 493 aa13.34□□□□□ -0.27
VRK3-206ENST00000594090 CXorf36Q9H7Y0 433 aa13.34□□□□□ -0.27
VRK3-206ENST00000594090 ZCCHC3Q9NUD5 404 aaKnown RBP13.34□□□□□ -0.27
VRK3-206ENST00000594090 KLRF1Q9NZS2 232 aa13.34□□□□□ -0.27
VRK3-206ENST00000594090 CBLCQ9ULV8 474 aa13.34□□□□□ -0.27
VRK3-206ENST00000594090 NCKAP5O14513 1909 aa13.33□□□□□ -0.27
VRK3-206ENST00000594090 E9PBE3 544 aa13.33□□□□□ -0.28
VRK3-206ENST00000594090 RNASET2O00584 256 aaKnown RBP13.33□□□□□ -0.28
VRK3-206ENST00000594090 CFLARO15519 480 aa13.33□□□□□ -0.28
VRK3-206ENST00000594090 ZNHIT1O43257 154 aa13.33□□□□□ -0.28
VRK3-206ENST00000594090 DIAPH2O60879 1101 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms