RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 FAF1Q9UNN5 650 aaPredicted RBP13.76□□□□□ -0.21
DDX39A-221ENST00000593026 KLF13Q9Y2Y9 288 aaPredicted RBP13.76□□□□□ -0.21
DDX39A-221ENST00000593026 BSNQ9UPA5 3926 aa13.76□□□□□ -0.21
DDX39A-221ENST00000593026 GMNCA6NCL1 334 aa13.75□□□□□ -0.21
DDX39A-221ENST00000593026 CCDC154A6NI56 674 aa13.75□□□□□ -0.21
DDX39A-221ENST00000593026 TP53I11O14683 189 aa13.75□□□□□ -0.21
DDX39A-221ENST00000593026 REM1O75628 298 aa13.75□□□□□ -0.21
DDX39A-221ENST00000593026 PPM1BO75688 479 aa13.75□□□□□ -0.21
DDX39A-221ENST00000593026 RASAL1O95294 804 aa13.75□□□□□ -0.21
DDX39A-221ENST00000593026 UQCRC2P22695 453 aa13.75□□□□□ -0.21
DDX39A-221ENST00000593026 FBXW4P57775 412 aa13.75□□□□□ -0.21
DDX39A-221ENST00000593026 LASP1Q14847 261 aaKnown RBP13.75□□□□□ -0.21
DDX39A-221ENST00000593026 CYP27C1Q4G0S4 372 aa13.75□□□□□ -0.21
DDX39A-221ENST00000593026 ZCCHC12Q6PEW1 402 aa13.75□□□□□ -0.21
DDX39A-221ENST00000593026 BLOC1S3Q6QNY0 202 aa13.75□□□□□ -0.21
DDX39A-221ENST00000593026 SPATA21Q7Z572 469 aa13.75□□□□□ -0.21
DDX39A-221ENST00000593026 CPLX4Q7Z7G2 160 aa13.75□□□□□ -0.21
DDX39A-221ENST00000593026 FUNDC1Q8IVP5 155 aa13.75□□□□□ -0.21
DDX39A-221ENST00000593026 CLEC4FQ8N1N0 589 aa13.75□□□□□ -0.21
DDX39A-221ENST00000593026 TRIML2Q8N7C3 387 aa13.75□□□□□ -0.21
DDX39A-221ENST00000593026 FAM98AQ8NCA5 519 aaKnown RBP13.75□□□□□ -0.21
DDX39A-221ENST00000593026 OR10G3Q8NGC4 313 aa13.75□□□□□ -0.21
DDX39A-221ENST00000593026 GOT1L1Q8NHS2 421 aaPredicted RBP13.75□□□□□ -0.21
DDX39A-221ENST00000593026 GPR151Q8TDV0 419 aa13.75□□□□□ -0.21
DDX39A-221ENST00000593026 SLC9A6Q92581 669 aa13.75□□□□□ -0.21
DDX39A-221ENST00000593026 HOXB13Q92826 284 aaPredicted RBP13.75□□□□□ -0.21
DDX39A-221ENST00000593026 TMBIM1Q969X1 311 aa13.75□□□□□ -0.21
DDX39A-221ENST00000593026 C16orf58Q96GQ5 468 aa13.75□□□□□ -0.21
DDX39A-221ENST00000593026 ITCHQ96J02 903 aa13.75□□□□□ -0.21
DDX39A-221ENST00000593026 YIPF4Q9BSR8 244 aa13.75□□□□□ -0.21
DDX39A-221ENST00000593026 INPP5KQ9BT40 448 aa13.75□□□□□ -0.21
DDX39A-221ENST00000593026 EPN3Q9H201 632 aa13.75□□□□□ -0.21
DDX39A-221ENST00000593026 MRGBPQ9NV56 204 aa13.75□□□□□ -0.21
DDX39A-221ENST00000593026 VPS4AQ9UN37 437 aa13.75□□□□□ -0.21
DDX39A-221ENST00000593026 RFXANKO14593 260 aa13.74□□□□□ -0.21
DDX39A-221ENST00000593026 NKX2-2O95096 273 aa13.74□□□□□ -0.21
DDX39A-221ENST00000593026 P04436 131 aa13.74□□□□□ -0.21
DDX39A-221ENST00000593026 KRT16P08779 473 aa13.74□□□□□ -0.21
DDX39A-221ENST00000593026 ALOX5P09917 674 aa13.74□□□□□ -0.21
DDX39A-221ENST00000593026 CCL3P10147 92 aa13.74□□□□□ -0.21
DDX39A-221ENST00000593026 ACP2P11117 423 aa13.74□□□□□ -0.21
DDX39A-221ENST00000593026 DRD4P21917 467 aa13.74□□□□□ -0.21
DDX39A-221ENST00000593026 IL12BP29460 328 aa13.74□□□□□ -0.21
DDX39A-221ENST00000593026 GABRA3P34903 492 aa13.74□□□□□ -0.21
DDX39A-221ENST00000593026 CHI3L1P36222 383 aaPredicted RBP13.74□□□□□ -0.21
DDX39A-221ENST00000593026 MAP3K8P41279 467 aa13.74□□□□□ -0.21
DDX39A-221ENST00000593026 RPP38P78345 283 aaKnown RBP13.74□□□□□ -0.21
DDX39A-221ENST00000593026 GAB1Q13480 694 aa13.74□□□□□ -0.21
DDX39A-221ENST00000593026 INPP5JQ15735 1006 aaPredicted RBP13.74□□□□□ -0.21
DDX39A-221ENST00000593026 DECR1Q16698 335 aa13.74□□□□□ -0.21
DDX39A-221ENST00000593026 C6orf10Q5SRN2 563 aa13.74□□□□□ -0.21
DDX39A-221ENST00000593026 SLC22A10Q63ZE4 541 aa13.74□□□□□ -0.21
DDX39A-221ENST00000593026 FAM180AQ6UWF9 173 aa13.74□□□□□ -0.21
DDX39A-221ENST00000593026 ZNF621Q6ZSS3 439 aa13.74□□□□□ -0.21
DDX39A-221ENST00000593026 C6orf120Q7Z4R8 191 aa13.74□□□□□ -0.21
DDX39A-221ENST00000593026 CISD2Q8N5K1 135 aaKnown RBP13.74□□□□□ -0.21
DDX39A-221ENST00000593026 CPSF7Q8N684 471 aaKnown RBP13.74□□□□□ -0.21
DDX39A-221ENST00000593026 SLC16A11Q8NCK7 471 aa13.74□□□□□ -0.21
DDX39A-221ENST00000593026 OR4N2Q8NGD1 307 aa13.74□□□□□ -0.21
DDX39A-221ENST00000593026 PAQR8Q8TEZ7 354 aa13.74□□□□□ -0.21
DDX39A-221ENST00000593026 SPDL1Q96EA4 605 aa13.74□□□□□ -0.21
DDX39A-221ENST00000593026 OTUB1Q96FW1 271 aaPredicted RBP13.74□□□□□ -0.21
DDX39A-221ENST00000593026 ELAC2Q9BQ52 826 aaKnown RBP13.74□□□□□ -0.21
DDX39A-221ENST00000593026 SLC35A5Q9BS91 424 aa13.74□□□□□ -0.21
DDX39A-221ENST00000593026 ACTRT3Q9BYD9 372 aa13.74□□□□□ -0.21
DDX39A-221ENST00000593026 SERHLQ9NQF3 203 aa13.74□□□□□ -0.21
DDX39A-221ENST00000593026 SACM1LQ9NTJ5 587 aa13.74□□□□□ -0.21
DDX39A-221ENST00000593026 GPATCH2Q9NW75 528 aa13.74□□□□□ -0.21
DDX39A-221ENST00000593026 CNIH4Q9P003 139 aa13.74□□□□□ -0.21
DDX39A-221ENST00000593026 MAP10Q9P2G4 905 aa13.74□□□□□ -0.21
DDX39A-221ENST00000593026 CBLCQ9ULV8 474 aa13.74□□□□□ -0.21
DDX39A-221ENST00000593026 CHCHD2Q9Y6H1 151 aaPredicted RBP13.74□□□□□ -0.21
DDX39A-221ENST00000593026 EXPH5Q8NEV8 1989 aa13.73□□□□□ -0.21
DDX39A-221ENST00000593026 OR6C70A6NIJ9 312 aa13.73□□□□□ -0.21
DDX39A-221ENST00000593026 KLRC4-KLRK1H3BQV0 150 aa13.73□□□□□ -0.21
DDX39A-221ENST00000593026 SLC28A2O43868 658 aa13.73□□□□□ -0.21
DDX39A-221ENST00000593026 PEX1O43933 1283 aa13.73□□□□□ -0.21
DDX39A-221ENST00000593026 ABCB7O75027 752 aa13.73□□□□□ -0.21
DDX39A-221ENST00000593026 KCNH1O95259 989 aa13.73□□□□□ -0.21
DDX39A-221ENST00000593026 ANP32DO95626 131 aa13.73□□□□□ -0.21
DDX39A-221ENST00000593026 GSNP06396 782 aa13.73□□□□□ -0.21
DDX39A-221ENST00000593026 PIGAP37287 484 aa13.73□□□□□ -0.21
DDX39A-221ENST00000593026 CDKN2CP42773 168 aa13.73□□□□□ -0.21
DDX39A-221ENST00000593026 MLLT10P55197 1068 aa13.73□□□□□ -0.21
DDX39A-221ENST00000593026 GPR85P60893 370 aa13.73□□□□□ -0.21
DDX39A-221ENST00000593026 DUSP5Q16690 384 aa13.73□□□□□ -0.21
DDX39A-221ENST00000593026 PRR30Q53SZ7 412 aaPredicted RBP13.73□□□□□ -0.21
DDX39A-221ENST00000593026 EXOSC6Q5RKV6 272 aaKnown RBP13.73□□□□□ -0.21
DDX39A-221ENST00000593026 PRAMEF20Q5VT98 475 aa13.73□□□□□ -0.21
DDX39A-221ENST00000593026 CDC73Q6P1J9 531 aa13.73□□□□□ -0.21
DDX39A-221ENST00000593026 SLC2A7Q6PXP3 512 aa13.73□□□□□ -0.21
DDX39A-221ENST00000593026 DNAJC14Q6Y2X3 702 aaPredicted RBP13.73□□□□□ -0.21
DDX39A-221ENST00000593026 GK5Q6ZS86 529 aa13.73□□□□□ -0.21
DDX39A-221ENST00000593026 NUP54Q7Z3B4 507 aa13.73□□□□□ -0.21
DDX39A-221ENST00000593026 SULF2Q8IWU5 870 aa13.73□□□□□ -0.21
DDX39A-221ENST00000593026 FBXW8Q8N3Y1 598 aa13.73□□□□□ -0.21
DDX39A-221ENST00000593026 COX18Q8N8Q8 333 aa13.73□□□□□ -0.21
DDX39A-221ENST00000593026 SPPL2AQ8TCT8 520 aa13.73□□□□□ -0.21
DDX39A-221ENST00000593026 ADAMTS15Q8TE58 950 aa13.73□□□□□ -0.21
DDX39A-221ENST00000593026 PIK3R3Q92569 461 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms