RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 KIF18AQ8NI77 898 aa12.09□□□□□ -0.47
APOC1-209ENST00000592885 C16orf78Q8WTQ4 265 aa12.09□□□□□ -0.47
APOC1-209ENST00000592885 RNF138Q8WVD3 245 aa12.09□□□□□ -0.47
APOC1-209ENST00000592885 TMBIM1Q969X1 311 aa12.09□□□□□ -0.47
APOC1-209ENST00000592885 RMND5BQ96G75 393 aaPredicted RBP12.09□□□□□ -0.47
APOC1-209ENST00000592885 VSTM2LQ96N03 204 aa12.09□□□□□ -0.47
APOC1-209ENST00000592885 UCN2Q96RP3 112 aa12.09□□□□□ -0.47
APOC1-209ENST00000592885 TM9SF2Q99805 663 aa12.09□□□□□ -0.47
APOC1-209ENST00000592885 FOXC2Q99958 501 aa12.09□□□□□ -0.47
APOC1-209ENST00000592885 SFXN3Q9BWM7 321 aa12.09□□□□□ -0.47
APOC1-209ENST00000592885 POLDIP3Q9BY77 421 aaKnown RBP12.09□□□□□ -0.47
APOC1-209ENST00000592885 CXXC4Q9H2H0 198 aa12.09□□□□□ -0.47
APOC1-209ENST00000592885 CLEC4MQ9H2X3 399 aaPredicted RBP12.09□□□□□ -0.47
APOC1-209ENST00000592885 ACBD3Q9H3P7 528 aa12.09□□□□□ -0.47
APOC1-209ENST00000592885 GALNT9Q9HCQ5 603 aa12.09□□□□□ -0.47
APOC1-209ENST00000592885 SLC35C2Q9NQQ7 365 aa12.09□□□□□ -0.47
APOC1-209ENST00000592885 RASSF1Q9NS23 344 aa12.09□□□□□ -0.47
APOC1-209ENST00000592885 TAS2R9Q9NYW1 312 aa12.09□□□□□ -0.47
APOC1-209ENST00000592885 CRIM1Q9NZV1 1036 aa12.09□□□□□ -0.47
APOC1-209ENST00000592885 JKAMPQ9P055 326 aa12.09□□□□□ -0.47
APOC1-209ENST00000592885 SENP1Q9P0U3 644 aa12.09□□□□□ -0.47
APOC1-209ENST00000592885 DCDC2Q9UHG0 476 aa12.09□□□□□ -0.47
APOC1-209ENST00000592885 MAPRE3Q9UPY8 281 aa12.09□□□□□ -0.47
APOC1-209ENST00000592885 WBP11Q9Y2W2 641 aaKnown RBP12.09□□□□□ -0.47
APOC1-209ENST00000592885 MRPS18CQ9Y3D5 142 aaKnown RBP12.09□□□□□ -0.47
APOC1-209ENST00000592885 C2CD3Q4AC94 2353 aa12.08□□□□□ -0.47
APOC1-209ENST00000592885 SPG11Q96JI7 2443 aa12.08□□□□□ -0.48
APOC1-209ENST00000592885 A0A087WV62 115 aa12.08□□□□□ -0.48
APOC1-209ENST00000592885 A6NNC1 897 aa12.08□□□□□ -0.48
APOC1-209ENST00000592885 KDM4EB2RXH2 506 aaPredicted RBP12.08□□□□□ -0.48
APOC1-209ENST00000592885 H0Y3Z8 333 aa12.08□□□□□ -0.48
APOC1-209ENST00000592885 TSPAN2O60636 221 aa12.08□□□□□ -0.48
APOC1-209ENST00000592885 GLRA3O75311 464 aa12.08□□□□□ -0.48
APOC1-209ENST00000592885 IFI6P09912 130 aa12.08□□□□□ -0.48
APOC1-209ENST00000592885 CT45A8P0DMV1 189 aa12.08□□□□□ -0.48
APOC1-209ENST00000592885 CT45A9P0DMV2 189 aa12.08□□□□□ -0.48
APOC1-209ENST00000592885 CHN1P15882 459 aa12.08□□□□□ -0.48
APOC1-209ENST00000592885 DDCP20711 480 aa12.08□□□□□ -0.48
APOC1-209ENST00000592885 CHMP24386 653 aa12.08□□□□□ -0.48
APOC1-209ENST00000592885 IL12BP29460 328 aa12.08□□□□□ -0.48
APOC1-209ENST00000592885 MPIP34949 423 aa12.08□□□□□ -0.48
APOC1-209ENST00000592885 HTR6P50406 440 aa12.08□□□□□ -0.48
APOC1-209ENST00000592885 PNLIPRP2P54317 469 aa12.08□□□□□ -0.48
APOC1-209ENST00000592885 EEF1A1P68104 462 aaKnown RBP12.08□□□□□ -0.48
APOC1-209ENST00000592885 DAZAP2Q15038 168 aaPredicted RBP12.08□□□□□ -0.48
APOC1-209ENST00000592885 CT45A2Q5DJT8 189 aa12.08□□□□□ -0.48
APOC1-209ENST00000592885 EEF1A1P5Q5VTE0 462 aa12.08□□□□□ -0.48
APOC1-209ENST00000592885 ADGRE4PQ86SQ3 457 aa12.08□□□□□ -0.48
APOC1-209ENST00000592885 YRDCQ86U90 279 aaKnown RBP12.08□□□□□ -0.48
APOC1-209ENST00000592885 WDSUB1Q8N9V3 476 aa12.08□□□□□ -0.48
APOC1-209ENST00000592885 FAM76AQ8TAV0 307 aa12.08□□□□□ -0.48
APOC1-209ENST00000592885 MZB1Q8WU39 189 aa12.08□□□□□ -0.48
APOC1-209ENST00000592885 EXOSC8Q96B26 276 aaKnown RBP12.08□□□□□ -0.48
APOC1-209ENST00000592885 APIPQ96GX9 242 aa12.08□□□□□ -0.48
APOC1-209ENST00000592885 TXLNGYQ9BZA5 131 aa12.08□□□□□ -0.48
APOC1-209ENST00000592885 GSTO2Q9H4Y5 243 aa12.08□□□□□ -0.48
APOC1-209ENST00000592885 PPCSQ9HAB8 311 aa12.08□□□□□ -0.48
APOC1-209ENST00000592885 FOLH1BQ9HBA9 442 aa12.08□□□□□ -0.48
APOC1-209ENST00000592885 SERHLQ9NQF3 203 aa12.08□□□□□ -0.48
APOC1-209ENST00000592885 GRID1Q9ULK0 1009 aa12.08□□□□□ -0.48
APOC1-209ENST00000592885 KIAA1549Q9HCM3 1950 aa12.07□□□□□ -0.48
APOC1-209ENST00000592885 REM1O75628 298 aa12.07□□□□□ -0.48
APOC1-209ENST00000592885 ANXA4P09525 319 aaPredicted RBP12.07□□□□□ -0.48
APOC1-209ENST00000592885 TMIGD3P0DMS9 266 aaPredicted RBP12.07□□□□□ -0.48
APOC1-209ENST00000592885 PYGBP11216 843 aa12.07□□□□□ -0.48
APOC1-209ENST00000592885 TACR1P25103 407 aa12.07□□□□□ -0.48
APOC1-209ENST00000592885 IST1P53990 364 aa12.07□□□□□ -0.48
APOC1-209ENST00000592885 GFRA1P56159 465 aa12.07□□□□□ -0.48
APOC1-209ENST00000592885 WNT3P56703 355 aa12.07□□□□□ -0.48
APOC1-209ENST00000592885 FAM180BQ6P0A1 224 aa12.07□□□□□ -0.48
APOC1-209ENST00000592885 ZYG11AQ6WRX3 759 aa12.07□□□□□ -0.48
APOC1-209ENST00000592885 IKBIPQ70UQ0 350 aa12.07□□□□□ -0.48
APOC1-209ENST00000592885 CHDHQ8NE62 594 aaPredicted RBP12.07□□□□□ -0.48
APOC1-209ENST00000592885 WNT2BQ93097 391 aa12.07□□□□□ -0.48
APOC1-209ENST00000592885 METTL2AQ96IZ6 378 aaKnown RBP12.07□□□□□ -0.48
APOC1-209ENST00000592885 BBS4Q96RK4 519 aa12.07□□□□□ -0.48
APOC1-209ENST00000592885 ADOQ96SZ5 270 aa12.07□□□□□ -0.48
APOC1-209ENST00000592885 GPATCH1Q9BRR8 931 aaKnown RBP12.07□□□□□ -0.48
APOC1-209ENST00000592885 MID1IP1Q9NPA3 183 aa12.07□□□□□ -0.48
APOC1-209ENST00000592885 MYNNQ9NPC7 610 aa12.07□□□□□ -0.48
APOC1-209ENST00000592885 MIEF1Q9NQG6 463 aa12.07□□□□□ -0.48
APOC1-209ENST00000592885 TAS2R10Q9NYW0 307 aa12.07□□□□□ -0.48
APOC1-209ENST00000592885 TAS2R7Q9NYW3 318 aa12.07□□□□□ -0.48
APOC1-209ENST00000592885 ST6GALNAC2Q9UJ37 374 aa12.07□□□□□ -0.48
APOC1-209ENST00000592885 CBLCQ9ULV8 474 aa12.07□□□□□ -0.48
APOC1-209ENST00000592885 TUBAL3A6NHL2 446 aa12.06□□□□□ -0.48
APOC1-209ENST00000592885 MYO1GB0I1T2 1018 aa12.06□□□□□ -0.48
APOC1-209ENST00000592885 EEF1E1-BLOC1S5C9J1V9 151 aa12.06□□□□□ -0.48
APOC1-209ENST00000592885 GOLGA8RI6L899 631 aa12.06□□□□□ -0.48
APOC1-209ENST00000592885 EEF1E1O43324 174 aaKnown RBP12.06□□□□□ -0.48
APOC1-209ENST00000592885 RSL1D1O76021 490 aaKnown RBP12.06□□□□□ -0.48
APOC1-209ENST00000592885 RCBTB2O95199 551 aa12.06□□□□□ -0.48
APOC1-209ENST00000592885 MYL2P10916 166 aa12.06□□□□□ -0.48
APOC1-209ENST00000592885 NTSP30990 170 aa12.06□□□□□ -0.48
APOC1-209ENST00000592885 DGKQP52824 942 aa12.06□□□□□ -0.48
APOC1-209ENST00000592885 CORO7P57737 925 aa12.06□□□□□ -0.48
APOC1-209ENST00000592885 ZNF155Q12901 538 aaPredicted RBP12.06□□□□□ -0.48
APOC1-209ENST00000592885 GAB1Q13480 694 aa12.06□□□□□ -0.48
APOC1-209ENST00000592885 SLC29A2Q14542 456 aa12.06□□□□□ -0.48
APOC1-209ENST00000592885 GANABQ14697 944 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms