RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 EXO1Q9UQ84 846 aaKnown RBP9.26□□□□□ -0.93
BRCA1-227ENST00000591849 DTX4Q9Y2E6 619 aa9.26□□□□□ -0.93
BRCA1-227ENST00000591849 GPR55Q9Y2T6 319 aaPredicted RBP9.26□□□□□ -0.93
BRCA1-227ENST00000591849 SNX8Q9Y5X2 465 aa9.26□□□□□ -0.93
BRCA1-227ENST00000591849 CHCHD2Q9Y6H1 151 aaPredicted RBP9.26□□□□□ -0.93
BRCA1-227ENST00000591849 MYO9AB2RTY4 2548 aa9.26□□□□□ -0.93
BRCA1-227ENST00000591849 ANKRD33BA6NCL7 494 aa9.25□□□□□ -0.93
BRCA1-227ENST00000591849 TTC36A6NLP5 189 aa9.25□□□□□ -0.93
BRCA1-227ENST00000591849 HMGB1P1B2RPK0 211 aaPredicted RBP9.25□□□□□ -0.93
BRCA1-227ENST00000591849 SLCO1B7G3V0H7 640 aa9.25□□□□□ -0.93
BRCA1-227ENST00000591849 UPK1AO00322 258 aa9.25□□□□□ -0.93
BRCA1-227ENST00000591849 EMC8O43402 210 aa9.25□□□□□ -0.93
BRCA1-227ENST00000591849 ABCB7O75027 752 aa9.25□□□□□ -0.93
BRCA1-227ENST00000591849 GDF1P27539 372 aa9.25□□□□□ -0.93
BRCA1-227ENST00000591849 GCKP35557 465 aa9.25□□□□□ -0.93
BRCA1-227ENST00000591849 MAGEA5P43359 124 aa9.25□□□□□ -0.93
BRCA1-227ENST00000591849 MAN2A2P49641 1150 aa9.25□□□□□ -0.93
BRCA1-227ENST00000591849 CLK3P49761 638 aaKnown RBP9.25□□□□□ -0.93
BRCA1-227ENST00000591849 PSMD4P55036 377 aaKnown RBP9.25□□□□□ -0.93
BRCA1-227ENST00000591849 CORO7P57737 925 aa9.25□□□□□ -0.93
BRCA1-227ENST00000591849 PRR5P85299 388 aa9.25□□□□□ -0.93
BRCA1-227ENST00000591849 PTGR1Q14914 329 aa9.25□□□□□ -0.93
BRCA1-227ENST00000591849 C3AR1Q16581 482 aa9.25□□□□□ -0.93
BRCA1-227ENST00000591849 VPS26BQ4G0F5 336 aa9.25□□□□□ -0.93
BRCA1-227ENST00000591849 ZNF385BQ569K4 471 aa9.25□□□□□ -0.93
BRCA1-227ENST00000591849 CMPK2Q5EBM0 449 aa9.25□□□□□ -0.93
BRCA1-227ENST00000591849 OR2L13Q8N349 312 aa9.25□□□□□ -0.93
BRCA1-227ENST00000591849 KRTCAP2Q8N6L1 136 aa9.25□□□□□ -0.93
BRCA1-227ENST00000591849 NUP43Q8NFH3 380 aa9.25□□□□□ -0.93
BRCA1-227ENST00000591849 OR7A2PQ8NGA2 310 aa9.25□□□□□ -0.93
BRCA1-227ENST00000591849 LRRC8CQ8TDW0 803 aa9.25□□□□□ -0.93
BRCA1-227ENST00000591849 OR5P2Q8WZ92 322 aa9.25□□□□□ -0.93
BRCA1-227ENST00000591849 SLC9A6Q92581 669 aa9.25□□□□□ -0.93
BRCA1-227ENST00000591849 JADE3Q92613 823 aa9.25□□□□□ -0.93
BRCA1-227ENST00000591849 ZNF75CPQ92670 426 aaPredicted RBP9.25□□□□□ -0.93
BRCA1-227ENST00000591849 DTNBP1Q96EV8 351 aa9.25□□□□□ -0.93
BRCA1-227ENST00000591849 ZNF764Q96H86 408 aaPredicted RBP9.25□□□□□ -0.93
BRCA1-227ENST00000591849 VSTM2LQ96N03 204 aa9.25□□□□□ -0.93
BRCA1-227ENST00000591849 BTBD9Q96Q07 612 aa9.25□□□□□ -0.93
BRCA1-227ENST00000591849 ADOQ96SZ5 270 aa9.25□□□□□ -0.93
BRCA1-227ENST00000591849 VIPAS39Q9H9C1 493 aa9.25□□□□□ -0.93
BRCA1-227ENST00000591849 Q9N2J8 555 aa9.25□□□□□ -0.93
BRCA1-227ENST00000591849 ALKBH4Q9NXW9 302 aa9.25□□□□□ -0.93
BRCA1-227ENST00000591849 ACAD8Q9UKU7 415 aa9.25□□□□□ -0.93
BRCA1-227ENST00000591849 PCDHGB4Q9UN71 923 aa9.25□□□□□ -0.93
BRCA1-227ENST00000591849 UTP20O75691 2785 aaKnown RBP9.25□□□□□ -0.93
BRCA1-227ENST00000591849 SVILO95425 2214 aa9.25□□□□□ -0.93
BRCA1-227ENST00000591849 CPAMD8Q8IZJ3 1885 aa9.24□□□□□ -0.93
BRCA1-227ENST00000591849 TRGV5A0A0B4J1U4 118 aa9.24□□□□□ -0.93
BRCA1-227ENST00000591849 A1L4Q6 167 aa9.24□□□□□ -0.93
BRCA1-227ENST00000591849 PRAMEF25A6NGN4 478 aa9.24□□□□□ -0.93
BRCA1-227ENST00000591849 OR6C70A6NIJ9 312 aa9.24□□□□□ -0.93
BRCA1-227ENST00000591849 NPIPA2E9PIF3 369 aa9.24□□□□□ -0.93
BRCA1-227ENST00000591849 NPIPA3F8WFD2 350 aa9.24□□□□□ -0.93
BRCA1-227ENST00000591849 GNB5O14775 395 aa9.24□□□□□ -0.93
BRCA1-227ENST00000591849 TO15178 435 aa9.24□□□□□ -0.93
BRCA1-227ENST00000591849 HDAC3O15379 428 aa9.24□□□□□ -0.93
BRCA1-227ENST00000591849 ZNHIT1O43257 154 aa9.24□□□□□ -0.93
BRCA1-227ENST00000591849 GLSO94925 669 aaPredicted RBP9.24□□□□□ -0.93
BRCA1-227ENST00000591849 KCNH1O95259 989 aa9.24□□□□□ -0.93
BRCA1-227ENST00000591849 LAMP1P11279 417 aa9.24□□□□□ -0.93
BRCA1-227ENST00000591849 H2AFXP16104 143 aaPredicted RBP9.24□□□□□ -0.93
BRCA1-227ENST00000591849 GABRA3P34903 492 aa9.24□□□□□ -0.93
BRCA1-227ENST00000591849 SOAT1P35610 550 aa9.24□□□□□ -0.93
BRCA1-227ENST00000591849 CASP3P42574 277 aa9.24□□□□□ -0.93
BRCA1-227ENST00000591849 CA7P43166 264 aa9.24□□□□□ -0.93
BRCA1-227ENST00000591849 TRPC1P48995 793 aa9.24□□□□□ -0.93
BRCA1-227ENST00000591849 PRIM2P49643 509 aa9.24□□□□□ -0.93
BRCA1-227ENST00000591849 CDK9P50750 372 aaKnown RBP9.24□□□□□ -0.93
BRCA1-227ENST00000591849 SMSP52788 366 aa9.24□□□□□ -0.93
BRCA1-227ENST00000591849 PNLIPRP2P54317 469 aa9.24□□□□□ -0.93
BRCA1-227ENST00000591849 CLDN8P56748 225 aa9.24□□□□□ -0.93
BRCA1-227ENST00000591849 PDE7AQ13946 482 aa9.24□□□□□ -0.93
BRCA1-227ENST00000591849 CYP27C1Q4G0S4 372 aa9.24□□□□□ -0.93
BRCA1-227ENST00000591849 BICRALQ6AI39 1079 aa9.24□□□□□ -0.93
BRCA1-227ENST00000591849 SLC30A6Q6NXT4 461 aa9.24□□□□□ -0.93
BRCA1-227ENST00000591849 ANGPTL8Q6UXH0 198 aa9.24□□□□□ -0.93
BRCA1-227ENST00000591849 SPATA19Q7Z5L4 167 aa9.24□□□□□ -0.93
BRCA1-227ENST00000591849 WDR53Q7Z5U6 358 aaPredicted RBP9.24□□□□□ -0.93
BRCA1-227ENST00000591849 VPS37AQ8NEZ2 397 aa9.24□□□□□ -0.93
BRCA1-227ENST00000591849 OR1J4Q8NGS1 313 aa9.24□□□□□ -0.93
BRCA1-227ENST00000591849 FAM57AQ8TBR7 257 aa9.24□□□□□ -0.93
BRCA1-227ENST00000591849 GPR151Q8TDV0 419 aa9.24□□□□□ -0.93
BRCA1-227ENST00000591849 RELTQ969Z4 430 aa9.24□□□□□ -0.93
BRCA1-227ENST00000591849 EFHD2Q96C19 240 aaPredicted RBP9.24□□□□□ -0.93
BRCA1-227ENST00000591849 NODALQ96S42 347 aa9.24□□□□□ -0.93
BRCA1-227ENST00000591849 ZBTB18Q99592 522 aa9.24□□□□□ -0.93
BRCA1-227ENST00000591849 DUSP26Q9BV47 211 aa9.24□□□□□ -0.93
BRCA1-227ENST00000591849 OSBPL11Q9BXB4 747 aa9.24□□□□□ -0.93
BRCA1-227ENST00000591849 ANGPTL4Q9BY76 406 aa9.24□□□□□ -0.93
BRCA1-227ENST00000591849 SH2D2AQ9NP31 389 aa9.24□□□□□ -0.93
BRCA1-227ENST00000591849 HAO1Q9UJM8 370 aa9.24□□□□□ -0.93
BRCA1-227ENST00000591849 TINAGQ9UJW2 476 aa9.24□□□□□ -0.93
BRCA1-227ENST00000591849 CBLCQ9ULV8 474 aa9.24□□□□□ -0.93
BRCA1-227ENST00000591849 DOPEY1Q5JWR5 2465 aa9.24□□□□□ -0.93
BRCA1-227ENST00000591849 C15orf38-AP3S2A0A0A6YYH1 394 aa9.23□□□□□ -0.93
BRCA1-227ENST00000591849 GOLGA8QA0A0J9YX86 632 aa9.23□□□□□ -0.93
BRCA1-227ENST00000591849 GOLGA8OA6NCC3 632 aa9.23□□□□□ -0.93
BRCA1-227ENST00000591849 C2orf72A6NCS6 295 aa9.23□□□□□ -0.93
BRCA1-227ENST00000591849 GOLGA8NF8WBI6 632 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms