RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 IFI6P09912 130 aa16.68■□□□□ 0.26
DDX39A-212ENST00000590260 LAMP1P11279 417 aa16.68■□□□□ 0.26
DDX39A-212ENST00000590260 GRK2P25098 689 aa16.68■□□□□ 0.26
DDX39A-212ENST00000590260 TMED10P49755 219 aaKnown RBP16.68■□□□□ 0.26
DDX39A-212ENST00000590260 HSPB3Q12988 150 aa16.68■□□□□ 0.26
DDX39A-212ENST00000590260 STX3Q13277 289 aa16.68■□□□□ 0.26
DDX39A-212ENST00000590260 ATP6AP1LQ52LC2 224 aa16.68■□□□□ 0.26
DDX39A-212ENST00000590260 NUP54Q7Z3B4 507 aa16.68■□□□□ 0.26
DDX39A-212ENST00000590260 SLC44A2Q8IWA5 706 aaPredicted RBP16.68■□□□□ 0.26
DDX39A-212ENST00000590260 FNDC5Q8NAU1 212 aa16.68■□□□□ 0.26
DDX39A-212ENST00000590260 MGARPQ8TDB4 240 aa16.68■□□□□ 0.26
DDX39A-212ENST00000590260 HOXB13Q92826 284 aaPredicted RBP16.68■□□□□ 0.26
DDX39A-212ENST00000590260 TUBGCP3Q96CW5 907 aa16.68■□□□□ 0.26
DDX39A-212ENST00000590260 PAIP2Q9BPZ3 127 aaKnown RBP16.68■□□□□ 0.26
DDX39A-212ENST00000590260 STMN4Q9H169 189 aaPredicted RBP16.68■□□□□ 0.26
DDX39A-212ENST00000590260 AKTIPQ9H8T0 292 aa16.68■□□□□ 0.26
DDX39A-212ENST00000590260 SH3BP4Q9P0V3 963 aa16.68■□□□□ 0.26
DDX39A-212ENST00000590260 NTMQ9P121 344 aa16.68■□□□□ 0.26
DDX39A-212ENST00000590260 SPTAN1Q13813 2472 aaKnown RBP16.67■□□□□ 0.26
DDX39A-212ENST00000590260 SLITRK5O94991 958 aa16.67■□□□□ 0.26
DDX39A-212ENST00000590260 G6PDP11413 515 aa16.67■□□□□ 0.26
DDX39A-212ENST00000590260 ASMTP46597 345 aa16.67■□□□□ 0.26
DDX39A-212ENST00000590260 RPL14P50914 215 aaKnown RBP16.67■□□□□ 0.26
DDX39A-212ENST00000590260 DIO3P55073 304 aa16.67■□□□□ 0.26
DDX39A-212ENST00000590260 EMX2Q04743 252 aa16.67■□□□□ 0.26
DDX39A-212ENST00000590260 EXOSC6Q5RKV6 272 aaKnown RBP16.67■□□□□ 0.26
DDX39A-212ENST00000590260 ARHGAP11AQ6P4F7 1023 aa16.67■□□□□ 0.26
DDX39A-212ENST00000590260 HOMEZQ8IX15 550 aa16.67■□□□□ 0.26
DDX39A-212ENST00000590260 MTERF3Q96E29 417 aa16.67■□□□□ 0.26
DDX39A-212ENST00000590260 LMF2Q9BU23 707 aaKnown RBP16.67■□□□□ 0.26
DDX39A-212ENST00000590260 SLC6A15Q9H2J7 730 aa16.67■□□□□ 0.26
DDX39A-212ENST00000590260 ASIC5Q9NY37 505 aa16.67■□□□□ 0.26
DDX39A-212ENST00000590260 TAS2R9Q9NYW1 312 aa16.67■□□□□ 0.26
DDX39A-212ENST00000590260 FLRT3Q9NZU0 649 aa16.67■□□□□ 0.26
DDX39A-212ENST00000590260 BOKQ9UMX3 212 aaPredicted RBP16.67■□□□□ 0.26
DDX39A-212ENST00000590260 MYO7BQ6PIF6 2116 aa16.66■□□□□ 0.26
DDX39A-212ENST00000590260 OR6C70A6NIJ9 312 aa16.66■□□□□ 0.26
DDX39A-212ENST00000590260 ICOSLGO75144 302 aa16.66■□□□□ 0.26
DDX39A-212ENST00000590260 REM1O75628 298 aa16.66■□□□□ 0.26
DDX39A-212ENST00000590260 IGKV1D-16P01601 117 aa16.66■□□□□ 0.26
DDX39A-212ENST00000590260 TPOP07202 933 aa16.66■□□□□ 0.26
DDX39A-212ENST00000590260 PRPS2P11908 318 aa16.66■□□□□ 0.26
DDX39A-212ENST00000590260 H2AFXP16104 143 aaPredicted RBP16.66■□□□□ 0.26
DDX39A-212ENST00000590260 PTPN6P29350 595 aa16.66■□□□□ 0.26
DDX39A-212ENST00000590260 GAS1P54826 345 aa16.66■□□□□ 0.26
DDX39A-212ENST00000590260 PER3P56645 1201 aa16.66■□□□□ 0.26
DDX39A-212ENST00000590260 ZNF155Q12901 538 aaPredicted RBP16.66■□□□□ 0.26
DDX39A-212ENST00000590260 GAB1Q13480 694 aa16.66■□□□□ 0.26
DDX39A-212ENST00000590260 SLC10A1Q14973 349 aa16.66■□□□□ 0.26
DDX39A-212ENST00000590260 TTMPQ5BVD1 217 aa16.66■□□□□ 0.26
DDX39A-212ENST00000590260 TBCELQ5QJ74 424 aa16.66■□□□□ 0.26
DDX39A-212ENST00000590260 AGBL2Q5U5Z8 902 aa16.66■□□□□ 0.26
DDX39A-212ENST00000590260 HHATQ5VTY9 493 aa16.66■□□□□ 0.26
DDX39A-212ENST00000590260 MAMDC2Q7Z304 686 aaPredicted RBP16.66■□□□□ 0.26
DDX39A-212ENST00000590260 WDSUB1Q8N9V3 476 aa16.66■□□□□ 0.26
DDX39A-212ENST00000590260 EFHD2Q96C19 240 aaPredicted RBP16.66■□□□□ 0.26
DDX39A-212ENST00000590260 COQ8BQ96D53 544 aa16.66■□□□□ 0.26
DDX39A-212ENST00000590260 TMEM41AQ96HV5 264 aa16.66■□□□□ 0.26
DDX39A-212ENST00000590260 ZNF597Q96LX8 424 aa16.66■□□□□ 0.26
DDX39A-212ENST00000590260 JSRP1Q96MG2 331 aaPredicted RBP16.66■□□□□ 0.26
DDX39A-212ENST00000590260 COL21A1Q96P44 957 aa16.66■□□□□ 0.26
DDX39A-212ENST00000590260 GNRHR2Q96P88 292 aa16.66■□□□□ 0.26
DDX39A-212ENST00000590260 ADOQ96SZ5 270 aa16.66■□□□□ 0.26
DDX39A-212ENST00000590260 NUF2Q9BZD4 464 aa16.66■□□□□ 0.26
DDX39A-212ENST00000590260 RTN4RQ9BZR6 473 aa16.66■□□□□ 0.26
DDX39A-212ENST00000590260 PNPLA3Q9NST1 481 aa16.66■□□□□ 0.26
DDX39A-212ENST00000590260 ACSS1Q9NUB1 689 aaPredicted RBP16.66■□□□□ 0.26
DDX39A-212ENST00000590260 DDX18Q9NVP1 670 aaKnown RBP16.66■□□□□ 0.26
DDX39A-212ENST00000590260 C15orf41Q9Y2V0 281 aa16.66■□□□□ 0.26
DDX39A-212ENST00000590260 DIDO1Q9BTC0 2240 aaKnown RBP16.65■□□□□ 0.26
DDX39A-212ENST00000590260 GXYLT2A0PJZ3 443 aa16.65■□□□□ 0.26
DDX39A-212ENST00000590260 NPIPA2E9PIF3 369 aa16.65■□□□□ 0.26
DDX39A-212ENST00000590260 NPIPA3F8WFD2 350 aa16.65■□□□□ 0.26
DDX39A-212ENST00000590260 AQP7O14520 342 aa16.65■□□□□ 0.26
DDX39A-212ENST00000590260 GNB5O14775 395 aa16.65■□□□□ 0.26
DDX39A-212ENST00000590260 ANKRD28O15084 1053 aa16.65■□□□□ 0.26
DDX39A-212ENST00000590260 COQ9O75208 318 aa16.65■□□□□ 0.26
DDX39A-212ENST00000590260 SNX4O95219 450 aa16.65■□□□□ 0.26
DDX39A-212ENST00000590260 CYP4B1P13584 511 aa16.65■□□□□ 0.26
DDX39A-212ENST00000590260 MAPK1P28482 360 aa16.65■□□□□ 0.26
DDX39A-212ENST00000590260 C21orf58P58505 322 aa16.65■□□□□ 0.26
DDX39A-212ENST00000590260 MLC1Q15049 377 aa16.65■□□□□ 0.26
DDX39A-212ENST00000590260 GXYLT1Q4G148 440 aa16.65■□□□□ 0.26
DDX39A-212ENST00000590260 RTL6Q6ICC9 239 aa16.65■□□□□ 0.26
DDX39A-212ENST00000590260 LARP4Q71RC2 724 aaKnown RBP eCLIP16.65■□□□□ 0.26
DDX39A-212ENST00000590260 OSBPL11Q9BXB4 747 aa16.65■□□□□ 0.26
DDX39A-212ENST00000590260 MEAF6Q9HAF1 191 aa16.65■□□□□ 0.26
DDX39A-212ENST00000590260 ACKR4Q9NPB9 350 aa16.65■□□□□ 0.26
DDX39A-212ENST00000590260 QPCTLQ9NXS2 382 aa16.65■□□□□ 0.26
DDX39A-212ENST00000590260 PRAMEF25A6NGN4 478 aa16.64■□□□□ 0.25
DDX39A-212ENST00000590260 E9PLN8 166 aa16.64■□□□□ 0.25
DDX39A-212ENST00000590260 SDHDO14521 159 aa16.64■□□□□ 0.25
DDX39A-212ENST00000590260 PRRG2O14669 202 aa16.64■□□□□ 0.25
DDX39A-212ENST00000590260 SNPHO15079 494 aa16.64■□□□□ 0.25
DDX39A-212ENST00000590260 SUSD5O60279 629 aa16.64■□□□□ 0.25
DDX39A-212ENST00000590260 HPNP05981 417 aa16.64■□□□□ 0.25
DDX39A-212ENST00000590260 ACP2P11117 423 aa16.64■□□□□ 0.25
DDX39A-212ENST00000590260 GRNP28799 593 aaKnown RBP16.64■□□□□ 0.25
DDX39A-212ENST00000590260 TRPC1P48995 793 aa16.64■□□□□ 0.25
DDX39A-212ENST00000590260 MANFP55145 182 aaKnown RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms