RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 CLEC18AA5D8T8 446 aa9.55□□□□□ -0.88
SDF2-208ENST00000589788 ACOT7O00154 380 aa9.55□□□□□ -0.88
SDF2-208ENST00000589788 TP53I11O14683 189 aa9.55□□□□□ -0.88
SDF2-208ENST00000589788 AKAP10O43572 662 aa9.55□□□□□ -0.88
SDF2-208ENST00000589788 ASNA1O43681 348 aa9.55□□□□□ -0.88
SDF2-208ENST00000589788 ITM2AO43736 263 aa9.55□□□□□ -0.88
SDF2-208ENST00000589788 EDF1O60869 148 aaKnown RBP9.55□□□□□ -0.88
SDF2-208ENST00000589788 PEX11AO75192 247 aa9.55□□□□□ -0.88
SDF2-208ENST00000589788 SEMA7AO75326 666 aa9.55□□□□□ -0.88
SDF2-208ENST00000589788 ATP6AP2O75787 350 aa9.55□□□□□ -0.88
SDF2-208ENST00000589788 BCAS2O75934 225 aaPredicted RBP9.55□□□□□ -0.88
SDF2-208ENST00000589788 BPNT1O95861 308 aa9.55□□□□□ -0.88
SDF2-208ENST00000589788 CBX7O95931 251 aa9.55□□□□□ -0.88
SDF2-208ENST00000589788 JUNP05412 331 aaKnown RBP9.55□□□□□ -0.88
SDF2-208ENST00000589788 CCL3P10147 92 aa9.55□□□□□ -0.88
SDF2-208ENST00000589788 DDX5P17844 614 aaKnown RBP9.55□□□□□ -0.88
SDF2-208ENST00000589788 SDC1P18827 310 aa9.55□□□□□ -0.88
SDF2-208ENST00000589788 GPX3P22352 226 aa9.55□□□□□ -0.88
SDF2-208ENST00000589788 ASMTP46597 345 aa9.55□□□□□ -0.88
SDF2-208ENST00000589788 NCBP2P52298 156 aaKnown RBP eCLIP9.55□□□□□ -0.88
SDF2-208ENST00000589788 CASP6P55212 293 aa9.55□□□□□ -0.88
SDF2-208ENST00000589788 KCNJ2P63252 427 aa9.55□□□□□ -0.88
SDF2-208ENST00000589788 SRSF1Q07955 248 aaKnown RBP eCLIP9.55□□□□□ -0.88
SDF2-208ENST00000589788 NNATQ16517 81 aa9.55□□□□□ -0.88
SDF2-208ENST00000589788 ZNF628Q5EBL2 1059 aa9.55□□□□□ -0.88
SDF2-208ENST00000589788 WIPI1Q5MNZ9 446 aaPredicted RBP9.55□□□□□ -0.88
SDF2-208ENST00000589788 CLEC18BQ6UXF7 455 aa9.55□□□□□ -0.88
SDF2-208ENST00000589788 TMEM64Q6YI46 380 aa9.55□□□□□ -0.88
SDF2-208ENST00000589788 KIRREL3Q8IZU9 778 aa9.55□□□□□ -0.88
SDF2-208ENST00000589788 ZNF441Q8N8Z8 693 aa9.55□□□□□ -0.88
SDF2-208ENST00000589788 ZFP62Q8NB50 900 aaPredicted RBP9.55□□□□□ -0.88
SDF2-208ENST00000589788 CLEC18CQ8NCF0 446 aa9.55□□□□□ -0.88
SDF2-208ENST00000589788 C17orf47Q8NEP4 570 aa9.55□□□□□ -0.88
SDF2-208ENST00000589788 OR2M7Q8NG81 312 aa9.55□□□□□ -0.88
SDF2-208ENST00000589788 SSC4DQ8WTU2 575 aa9.55□□□□□ -0.88
SDF2-208ENST00000589788 ADIPOR1Q96A54 375 aa9.55□□□□□ -0.88
SDF2-208ENST00000589788 PPCDCQ96CD2 204 aa9.55□□□□□ -0.88
SDF2-208ENST00000589788 CTHRC1Q96CG8 243 aa9.55□□□□□ -0.88
SDF2-208ENST00000589788 TUBGCP3Q96CW5 907 aa9.55□□□□□ -0.88
SDF2-208ENST00000589788 CHMP6Q96FZ7 201 aa9.55□□□□□ -0.88
SDF2-208ENST00000589788 PLPPR2Q96GM1 343 aa9.55□□□□□ -0.88
SDF2-208ENST00000589788 MAGED4Q96JG8 741 aa9.55□□□□□ -0.88
SDF2-208ENST00000589788 FCRL1Q96LA6 429 aa9.55□□□□□ -0.88
SDF2-208ENST00000589788 SORT1Q99523 831 aa9.55□□□□□ -0.88
SDF2-208ENST00000589788 ITPAQ9BY32 194 aa9.55□□□□□ -0.88
SDF2-208ENST00000589788 C20orf27Q9GZN8 174 aa9.55□□□□□ -0.88
SDF2-208ENST00000589788 SLCO1B3Q9NPD5 702 aa9.55□□□□□ -0.88
SDF2-208ENST00000589788 DEPPQ9NTK1 212 aa9.55□□□□□ -0.88
SDF2-208ENST00000589788 BAIAP2L1Q9UHR4 511 aa9.55□□□□□ -0.88
SDF2-208ENST00000589788 HAO1Q9UJM8 370 aa9.55□□□□□ -0.88
SDF2-208ENST00000589788 RAP2CQ9Y3L5 183 aa9.55□□□□□ -0.88
SDF2-208ENST00000589788 NPFFR2Q9Y5X5 522 aa9.55□□□□□ -0.88
SDF2-208ENST00000589788 FLNCQ14315 2725 aa9.54□□□□□ -0.88
SDF2-208ENST00000589788 HIVEP3Q5T1R4 2406 aa9.54□□□□□ -0.88
SDF2-208ENST00000589788 POLEQ07864 2286 aa9.54□□□□□ -0.88
SDF2-208ENST00000589788 GMNCA6NCL1 334 aa9.54□□□□□ -0.88
SDF2-208ENST00000589788 MYO1GB0I1T2 1018 aa9.54□□□□□ -0.88
SDF2-208ENST00000589788 CDC40O60508 579 aaKnown RBP eCLIP9.54□□□□□ -0.88
SDF2-208ENST00000589788 COQ9O75208 318 aa9.54□□□□□ -0.88
SDF2-208ENST00000589788 SLITRK5O94991 958 aa9.54□□□□□ -0.88
SDF2-208ENST00000589788 LRATO95237 230 aa9.54□□□□□ -0.88
SDF2-208ENST00000589788 VIMP08670 466 aaKnown RBP9.54□□□□□ -0.88
SDF2-208ENST00000589788 STSP08842 583 aa9.54□□□□□ -0.88
SDF2-208ENST00000589788 BCKDHAP12694 445 aa9.54□□□□□ -0.88
SDF2-208ENST00000589788 HPCAL1P37235 193 aa9.54□□□□□ -0.88
SDF2-208ENST00000589788 PIGAP37287 484 aa9.54□□□□□ -0.88
SDF2-208ENST00000589788 DNASE1L1P49184 302 aa9.54□□□□□ -0.88
SDF2-208ENST00000589788 EMDP50402 254 aa9.54□□□□□ -0.88
SDF2-208ENST00000589788 RPL14P50914 215 aaKnown RBP9.54□□□□□ -0.88
SDF2-208ENST00000589788 PER3P56645 1201 aa9.54□□□□□ -0.88
SDF2-208ENST00000589788 DCAF7P61962 342 aa9.54□□□□□ -0.88
SDF2-208ENST00000589788 RPP38P78345 283 aaKnown RBP9.54□□□□□ -0.88
SDF2-208ENST00000589788 RPS6KA2Q15349 733 aa9.54□□□□□ -0.88
SDF2-208ENST00000589788 CEBPEQ15744 281 aa9.54□□□□□ -0.88
SDF2-208ENST00000589788 PDCD2Q16342 344 aaPredicted RBP9.54□□□□□ -0.88
SDF2-208ENST00000589788 NTRK2Q16620 822 aa9.54□□□□□ -0.88
SDF2-208ENST00000589788 XKR7Q5GH72 579 aa9.54□□□□□ -0.88
SDF2-208ENST00000589788 R3HCC1LQ7Z5L2 792 aaKnown RBP9.54□□□□□ -0.88
SDF2-208ENST00000589788 SLC22A16Q86VW1 577 aa9.54□□□□□ -0.88
SDF2-208ENST00000589788 SIAH3Q8IW03 269 aa9.54□□□□□ -0.88
SDF2-208ENST00000589788 LRRC34Q8IZ02 419 aa9.54□□□□□ -0.88
SDF2-208ENST00000589788 GHDCQ8N2G8 530 aa9.54□□□□□ -0.88
SDF2-208ENST00000589788 FBXW8Q8N3Y1 598 aa9.54□□□□□ -0.88
SDF2-208ENST00000589788 LIX1Q8N485 282 aa9.54□□□□□ -0.88
SDF2-208ENST00000589788 ZNF781Q8N8C0 355 aa9.54□□□□□ -0.88
SDF2-208ENST00000589788 FNDC5Q8NAU1 212 aa9.54□□□□□ -0.88
SDF2-208ENST00000589788 OR10G3Q8NGC4 313 aa9.54□□□□□ -0.88
SDF2-208ENST00000589788 CLHC1Q8NHS4 586 aa9.54□□□□□ -0.88
SDF2-208ENST00000589788 ZFP28Q8NHY6 868 aa9.54□□□□□ -0.88
SDF2-208ENST00000589788 PAQR8Q8TEZ7 354 aa9.54□□□□□ -0.88
SDF2-208ENST00000589788 HSPBAP1Q96EW2 488 aa9.54□□□□□ -0.88
SDF2-208ENST00000589788 LCORQ96JN0 433 aaPredicted RBP9.54□□□□□ -0.88
SDF2-208ENST00000589788 C3orf30Q96M34 536 aa9.54□□□□□ -0.88
SDF2-208ENST00000589788 AMDHD1Q96NU7 426 aa9.54□□□□□ -0.88
SDF2-208ENST00000589788 NXF5Q9H1B4 397 aaKnown RBP9.54□□□□□ -0.88
SDF2-208ENST00000589788 REEP4Q9H6H4 257 aa9.54□□□□□ -0.88
SDF2-208ENST00000589788 ANKRA2Q9H9E1 313 aa9.54□□□□□ -0.88
SDF2-208ENST00000589788 FGFR1OP2Q9NVK5 253 aa9.54□□□□□ -0.88
SDF2-208ENST00000589788 TAS2R9Q9NYW1 312 aa9.54□□□□□ -0.88
SDF2-208ENST00000589788 CNIH4Q9P003 139 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms