RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 MYLK2Q9H1R3 596 aa17.5■□□□□ 0.39
CLPTM1-209ENST00000588855 SERHL2Q9H4I8 314 aa17.5■□□□□ 0.39
CLPTM1-209ENST00000588855 TRIM45Q9H8W5 580 aaPredicted RBP17.5■□□□□ 0.39
CLPTM1-209ENST00000588855 NPFFR2Q9Y5X5 522 aa17.5■□□□□ 0.39
CLPTM1-209ENST00000588855 EML6Q6ZMW3 1958 aa17.5■□□□□ 0.39
CLPTM1-209ENST00000588855 SPTA1P02549 2419 aa17.49■□□□□ 0.39
CLPTM1-209ENST00000588855 SLC22A2O15244 555 aa17.49■□□□□ 0.39
CLPTM1-209ENST00000588855 NKX2-2O95096 273 aa17.49■□□□□ 0.39
CLPTM1-209ENST00000588855 FBXO45P0C2W1 286 aa17.49■□□□□ 0.39
CLPTM1-209ENST00000588855 HOXB9P17482 250 aaPredicted RBP17.49■□□□□ 0.39
CLPTM1-209ENST00000588855 TRPC1P48995 793 aa17.49■□□□□ 0.39
CLPTM1-209ENST00000588855 CASP9P55211 416 aa17.49■□□□□ 0.39
CLPTM1-209ENST00000588855 PLCXD2Q0VAA5 305 aa17.49■□□□□ 0.39
CLPTM1-209ENST00000588855 DUSP5Q16690 384 aa17.49■□□□□ 0.39
CLPTM1-209ENST00000588855 ZNF791Q3KP31 576 aaPredicted RBP17.49■□□□□ 0.39
CLPTM1-209ENST00000588855 NADK2Q4G0N4 442 aa17.49■□□□□ 0.39
CLPTM1-209ENST00000588855 SPINK14Q6IE38 97 aa17.49■□□□□ 0.39
CLPTM1-209ENST00000588855 CDC73Q6P1J9 531 aa17.49■□□□□ 0.39
CLPTM1-209ENST00000588855 ZCCHC12Q6PEW1 402 aa17.49■□□□□ 0.39
CLPTM1-209ENST00000588855 Q6ZS92 163 aa17.49■□□□□ 0.39
CLPTM1-209ENST00000588855 RETREG3Q86VR2 466 aa17.49■□□□□ 0.39
CLPTM1-209ENST00000588855 SNX32Q86XE0 403 aa17.49■□□□□ 0.39
CLPTM1-209ENST00000588855 GPALPP1Q8IXQ4 340 aa17.49■□□□□ 0.39
CLPTM1-209ENST00000588855 SLC34A3Q8N130 599 aa17.49■□□□□ 0.39
CLPTM1-209ENST00000588855 PIK3R3Q92569 461 aa17.49■□□□□ 0.39
CLPTM1-209ENST00000588855 TMBIM1Q969X1 311 aa17.49■□□□□ 0.39
CLPTM1-209ENST00000588855 SPACA9Q96E40 222 aaPredicted RBP17.49■□□□□ 0.39
CLPTM1-209ENST00000588855 OMA1Q96E52 524 aa17.49■□□□□ 0.39
CLPTM1-209ENST00000588855 NEURL3Q96EH8 262 aa17.49■□□□□ 0.39
CLPTM1-209ENST00000588855 CCDC106Q9BWC9 280 aa17.49■□□□□ 0.39
CLPTM1-209ENST00000588855 ACTRT3Q9BYD9 372 aa17.49■□□□□ 0.39
CLPTM1-209ENST00000588855 SLAMF8Q9P0V8 285 aa17.49■□□□□ 0.39
CLPTM1-209ENST00000588855 LEF1Q9UJU2 399 aaPredicted RBP17.49■□□□□ 0.39
CLPTM1-209ENST00000588855 NDUFAF1Q9Y375 327 aa17.49■□□□□ 0.39
CLPTM1-209ENST00000588855 OR10H1Q9Y4A9 318 aa17.49■□□□□ 0.39
CLPTM1-209ENST00000588855 A0A096LPI6 279 aa17.48■□□□□ 0.39
CLPTM1-209ENST00000588855 GXYLT2A0PJZ3 443 aa17.48■□□□□ 0.39
CLPTM1-209ENST00000588855 CDK2AP1O14519 115 aa17.48■□□□□ 0.39
CLPTM1-209ENST00000588855 ANGPT2O15123 496 aa17.48■□□□□ 0.39
CLPTM1-209ENST00000588855 ZCCHC18P0CG32 403 aa17.48■□□□□ 0.39
CLPTM1-209ENST00000588855 GABRA3P34903 492 aa17.48■□□□□ 0.39
CLPTM1-209ENST00000588855 COLEC12Q5KU26 742 aa17.48■□□□□ 0.39
CLPTM1-209ENST00000588855 GKAP1Q5VSY0 366 aaPredicted RBP17.48■□□□□ 0.39
CLPTM1-209ENST00000588855 FAM208BQ5VWN6 2430 aa17.48■□□□□ 0.39
CLPTM1-209ENST00000588855 SLC6A19Q695T7 634 aa17.48■□□□□ 0.39
CLPTM1-209ENST00000588855 ANGPTL8Q6UXH0 198 aa17.48■□□□□ 0.39
CLPTM1-209ENST00000588855 PTRH1Q86Y79 214 aaKnown RBP17.48■□□□□ 0.39
CLPTM1-209ENST00000588855 TREML1Q86YW5 311 aa17.48■□□□□ 0.39
CLPTM1-209ENST00000588855 LSM14AQ8ND56 463 aaKnown RBP17.48■□□□□ 0.39
CLPTM1-209ENST00000588855 OR5D16Q8NGK9 328 aa17.48■□□□□ 0.39
CLPTM1-209ENST00000588855 PNPT1Q8TCS8 783 aaKnown RBP17.48■□□□□ 0.39
CLPTM1-209ENST00000588855 GPR151Q8TDV0 419 aa17.48■□□□□ 0.39
CLPTM1-209ENST00000588855 ZFP90Q8TF47 636 aa17.48■□□□□ 0.39
CLPTM1-209ENST00000588855 AURKBQ96GD4 344 aaPredicted RBP17.48■□□□□ 0.39
CLPTM1-209ENST00000588855 PHF12Q96QT6 1004 aa17.48■□□□□ 0.39
CLPTM1-209ENST00000588855 HES7Q9BYE0 225 aa17.48■□□□□ 0.39
CLPTM1-209ENST00000588855 Q9N2J8 555 aa17.48■□□□□ 0.39
CLPTM1-209ENST00000588855 FAF1Q9UNN5 650 aaPredicted RBP17.48■□□□□ 0.39
CLPTM1-209ENST00000588855 PRRC2CQ9Y520 2896 aaKnown RBP17.48■□□□□ 0.39
CLPTM1-209ENST00000588855 PCDHB14Q9Y5E9 798 aa17.48■□□□□ 0.39
CLPTM1-209ENST00000588855 TTC36A6NLP5 189 aa17.47■□□□□ 0.39
CLPTM1-209ENST00000588855 FBP2O00757 339 aa17.47■□□□□ 0.39
CLPTM1-209ENST00000588855 ALOX5P09917 674 aa17.47■□□□□ 0.39
CLPTM1-209ENST00000588855 MATN1P21941 496 aa17.47■□□□□ 0.39
CLPTM1-209ENST00000588855 MAN2A2P49641 1150 aa17.47■□□□□ 0.39
CLPTM1-209ENST00000588855 FBXW4P57775 412 aa17.47■□□□□ 0.39
CLPTM1-209ENST00000588855 MAPRE2Q15555 327 aa17.47■□□□□ 0.39
CLPTM1-209ENST00000588855 LRIF1Q5T3J3 769 aa17.47■□□□□ 0.39
CLPTM1-209ENST00000588855 MDGA2Q7Z553 956 aa17.47■□□□□ 0.39
CLPTM1-209ENST00000588855 MSRB3Q8IXL7 192 aa17.47■□□□□ 0.39
CLPTM1-209ENST00000588855 POU5F2Q8N7G0 328 aa17.47■□□□□ 0.39
CLPTM1-209ENST00000588855 FAM13CQ8NE31 585 aa17.47■□□□□ 0.39
CLPTM1-209ENST00000588855 OR5M3Q8NGP4 307 aa17.47■□□□□ 0.39
CLPTM1-209ENST00000588855 SLC39A7Q92504 469 aa17.47■□□□□ 0.39
CLPTM1-209ENST00000588855 CDS1Q92903 461 aa17.47■□□□□ 0.39
CLPTM1-209ENST00000588855 OR7D2Q96RA2 312 aa17.47■□□□□ 0.39
CLPTM1-209ENST00000588855 SLC25A37Q9NYZ2 338 aa17.47■□□□□ 0.39
CLPTM1-209ENST00000588855 LUZP4Q9P127 313 aa17.47■□□□□ 0.39
CLPTM1-209ENST00000588855 CBLCQ9ULV8 474 aa17.47■□□□□ 0.39
CLPTM1-209ENST00000588855 B3GNT3Q9Y2A9 372 aa17.47■□□□□ 0.39
CLPTM1-209ENST00000588855 TRAV17A0A0B4J275 112 aa17.47■□□□□ 0.39
CLPTM1-209ENST00000588855 LOC100653049A0A140TA62 436 aa17.47■□□□□ 0.39
CLPTM1-209ENST00000588855 PPM1BO75688 479 aa17.47■□□□□ 0.39
CLPTM1-209ENST00000588855 SLC25A12O75746 678 aa17.47■□□□□ 0.39
CLPTM1-209ENST00000588855 KRT34O76011 436 aa17.47■□□□□ 0.39
CLPTM1-209ENST00000588855 KCNH1O95259 989 aa17.47■□□□□ 0.39
CLPTM1-209ENST00000588855 KRT16P08779 473 aa17.47■□□□□ 0.39
CLPTM1-209ENST00000588855 TMED10P49755 219 aaKnown RBP17.47■□□□□ 0.39
CLPTM1-209ENST00000588855 ZNF169Q14929 603 aaPredicted RBP17.47■□□□□ 0.39
CLPTM1-209ENST00000588855 NTRK2Q16620 822 aa17.47■□□□□ 0.39
CLPTM1-209ENST00000588855 DESI1Q6ICB0 168 aa17.47■□□□□ 0.39
CLPTM1-209ENST00000588855 TNFAIP8L2Q6P589 184 aaPredicted RBP17.47■□□□□ 0.39
CLPTM1-209ENST00000588855 RTL4Q6ZR62 310 aa17.47■□□□□ 0.39
CLPTM1-209ENST00000588855 DHDDSQ86SQ9 333 aa17.47■□□□□ 0.39
CLPTM1-209ENST00000588855 RNF130Q86XS8 419 aa17.47■□□□□ 0.39
CLPTM1-209ENST00000588855 DPP10Q8N608 796 aa17.47■□□□□ 0.39
CLPTM1-209ENST00000588855 COX18Q8N8Q8 333 aa17.47■□□□□ 0.39
CLPTM1-209ENST00000588855 TEX19Q8NA77 164 aa17.47■□□□□ 0.39
CLPTM1-209ENST00000588855 OR10G3Q8NGC4 313 aa17.47■□□□□ 0.39
CLPTM1-209ENST00000588855 ADAMTS15Q8TE58 950 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms