RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 LY6G6DO95868 133 aa16.67■□□□□ 0.26
CCDC43-204ENST00000588687 CT45A8P0DMV1 189 aa16.67■□□□□ 0.26
CCDC43-204ENST00000588687 CT45A9P0DMV2 189 aa16.67■□□□□ 0.26
CCDC43-204ENST00000588687 GCKP35557 465 aa16.67■□□□□ 0.26
CCDC43-204ENST00000588687 GAB1Q13480 694 aa16.67■□□□□ 0.26
CCDC43-204ENST00000588687 CT45A2Q5DJT8 189 aa16.67■□□□□ 0.26
CCDC43-204ENST00000588687 KLC3Q6P597 504 aa16.67■□□□□ 0.26
CCDC43-204ENST00000588687 NPSR1Q6W5P4 371 aa16.67■□□□□ 0.26
CCDC43-204ENST00000588687 KLHL29Q96CT2 875 aa16.67■□□□□ 0.26
CCDC43-204ENST00000588687 STARD4Q96DR4 205 aa16.67■□□□□ 0.26
CCDC43-204ENST00000588687 MRRFQ96E11 262 aaKnown RBP16.67■□□□□ 0.26
CCDC43-204ENST00000588687 VSTM2LQ96N03 204 aa16.67■□□□□ 0.26
CCDC43-204ENST00000588687 COL21A1Q96P44 957 aa16.67■□□□□ 0.26
CCDC43-204ENST00000588687 ANKRA2Q9H9E1 313 aa16.67■□□□□ 0.26
CCDC43-204ENST00000588687 AHSPQ9NZD4 102 aa16.67■□□□□ 0.26
CCDC43-204ENST00000588687 C6orf203Q9P0P8 240 aaPredicted RBP16.67■□□□□ 0.26
CCDC43-204ENST00000588687 HEY2Q9UBP5 337 aa16.67■□□□□ 0.26
CCDC43-204ENST00000588687 PYCARDQ9ULZ3 195 aa16.67■□□□□ 0.26
CCDC43-204ENST00000588687 SLC12A4Q9UP95 1085 aa16.67■□□□□ 0.26
CCDC43-204ENST00000588687 DLGAP4Q9Y2H0 992 aa16.67■□□□□ 0.26
CCDC43-204ENST00000588687 MRPS18CQ9Y3D5 142 aaKnown RBP16.67■□□□□ 0.26
CCDC43-204ENST00000588687 ATRQ13535 2644 aa16.67■□□□□ 0.26
CCDC43-204ENST00000588687 COL6A5A8TX70 2615 aa16.66■□□□□ 0.26
CCDC43-204ENST00000588687 ZIC3O60481 467 aa16.66■□□□□ 0.26
CCDC43-204ENST00000588687 PDYNP01213 254 aa16.66■□□□□ 0.26
CCDC43-204ENST00000588687 LOXP28300 417 aaPredicted RBP16.66■□□□□ 0.26
CCDC43-204ENST00000588687 TYK2P29597 1187 aa16.66■□□□□ 0.26
CCDC43-204ENST00000588687 CPOXP36551 454 aa16.66■□□□□ 0.26
CCDC43-204ENST00000588687 ARL1P40616 181 aaPredicted RBP16.66■□□□□ 0.26
CCDC43-204ENST00000588687 CLDN15P56746 228 aa16.66■□□□□ 0.26
CCDC43-204ENST00000588687 CORO7P57737 925 aa16.66■□□□□ 0.26
CCDC43-204ENST00000588687 FAM27E3Q08E93 113 aa16.66■□□□□ 0.26
CCDC43-204ENST00000588687 IFT88Q13099 833 aa16.66■□□□□ 0.26
CCDC43-204ENST00000588687 VWA1Q6PCB0 445 aa16.66■□□□□ 0.26
CCDC43-204ENST00000588687 GRAMD2AQ8IUY3 354 aa16.66■□□□□ 0.26
CCDC43-204ENST00000588687 PPP1R14CQ8TAE6 165 aa16.66■□□□□ 0.26
CCDC43-204ENST00000588687 ZNF483Q8TF39 744 aaPredicted RBP16.66■□□□□ 0.26
CCDC43-204ENST00000588687 ATP6V1E2Q96A05 226 aa16.66■□□□□ 0.26
CCDC43-204ENST00000588687 VPS11Q9H270 941 aa16.66■□□□□ 0.26
CCDC43-204ENST00000588687 ACSS3Q9H6R3 686 aa16.66■□□□□ 0.26
CCDC43-204ENST00000588687 BRF2Q9HAW0 419 aa16.66■□□□□ 0.26
CCDC43-204ENST00000588687 ZDHHC18Q9NUE0 388 aa16.66■□□□□ 0.26
CCDC43-204ENST00000588687 PRODH2Q9UF12 536 aa16.66■□□□□ 0.26
CCDC43-204ENST00000588687 UTP11Q9Y3A2 253 aaKnown RBP16.66■□□□□ 0.26
CCDC43-204ENST00000588687 HIVEP2P31629 2446 aa16.66■□□□□ 0.26
CCDC43-204ENST00000588687 ROS1P08922 2347 aa16.65■□□□□ 0.26
CCDC43-204ENST00000588687 CUBNO60494 3623 aa16.65■□□□□ 0.26
CCDC43-204ENST00000588687 ABCB7O75027 752 aa16.65■□□□□ 0.26
CCDC43-204ENST00000588687 GUCY1B2O75343 617 aa16.65■□□□□ 0.26
CCDC43-204ENST00000588687 CRHP06850 196 aa16.65■□□□□ 0.26
CCDC43-204ENST00000588687 SBK3P0C264 359 aa16.65■□□□□ 0.26
CCDC43-204ENST00000588687 DIO3P55073 304 aa16.65■□□□□ 0.26
CCDC43-204ENST00000588687 SGO1Q5FBB7 561 aa16.65■□□□□ 0.26
CCDC43-204ENST00000588687 TTC19Q6DKK2 380 aaPredicted RBP16.65■□□□□ 0.26
CCDC43-204ENST00000588687 AAGABQ6PD74 315 aa16.65■□□□□ 0.26
CCDC43-204ENST00000588687 ZNF474Q6S9Z5 364 aaPredicted RBP16.65■□□□□ 0.26
CCDC43-204ENST00000588687 C1orf52Q8N6N3 182 aaKnown RBP16.65■□□□□ 0.26
CCDC43-204ENST00000588687 SFXN2Q96NB2 322 aa16.65■□□□□ 0.26
CCDC43-204ENST00000588687 WFIKKN1Q96NZ8 548 aa16.65■□□□□ 0.26
CCDC43-204ENST00000588687 HBEGFQ99075 208 aa16.65■□□□□ 0.26
CCDC43-204ENST00000588687 C1QTNF3Q9BXJ4 246 aa16.65■□□□□ 0.26
CCDC43-204ENST00000588687 RAB17Q9H0T7 212 aa16.65■□□□□ 0.26
CCDC43-204ENST00000588687 ELOVL6Q9H5J4 265 aa16.65■□□□□ 0.26
CCDC43-204ENST00000588687 ZNF395Q9H8N7 513 aaPredicted RBP16.65■□□□□ 0.26
CCDC43-204ENST00000588687 KLHL28Q9NXS3 571 aa16.65■□□□□ 0.26
CCDC43-204ENST00000588687 DSCAMO60469 2012 aa16.64■□□□□ 0.25
CCDC43-204ENST00000588687 ESYT3A0FGR9 886 aa16.64■□□□□ 0.25
CCDC43-204ENST00000588687 H7C1Q1 480 aa16.64■□□□□ 0.25
CCDC43-204ENST00000588687 CRYGSP22914 178 aa16.64■□□□□ 0.25
CCDC43-204ENST00000588687 GRK2P25098 689 aa16.64■□□□□ 0.25
CCDC43-204ENST00000588687 DEKP35659 375 aaKnown RBP16.64■□□□□ 0.25
CCDC43-204ENST00000588687 MC3RP41968 323 aa16.64■□□□□ 0.25
CCDC43-204ENST00000588687 TRA2BP62995 288 aaKnown RBP16.64■□□□□ 0.25
CCDC43-204ENST00000588687 EEF1A1P68104 462 aaKnown RBP16.64■□□□□ 0.25
CCDC43-204ENST00000588687 GUSBP1Q15486 140 aa16.64■□□□□ 0.25
CCDC43-204ENST00000588687 UAP1Q16222 522 aaPredicted RBP16.64■□□□□ 0.25
CCDC43-204ENST00000588687 BCL2A1Q16548 175 aa16.64■□□□□ 0.25
CCDC43-204ENST00000588687 EEF1A1P5Q5VTE0 462 aa16.64■□□□□ 0.25
CCDC43-204ENST00000588687 OR5M10Q6IEU7 315 aa16.64■□□□□ 0.25
CCDC43-204ENST00000588687 SCIMPQ6UWF3 145 aa16.64■□□□□ 0.25
CCDC43-204ENST00000588687 MILR1Q7Z6M3 343 aa16.64■□□□□ 0.25
CCDC43-204ENST00000588687 TMEM151AQ8N4L1 468 aa16.64■□□□□ 0.25
CCDC43-204ENST00000588687 GBP7Q8N8V2 638 aaPredicted RBP16.64■□□□□ 0.25
CCDC43-204ENST00000588687 FADS6Q8N9I5 356 aa16.64■□□□□ 0.25
CCDC43-204ENST00000588687 IGFBPL1Q8WX77 278 aa16.64■□□□□ 0.25
CCDC43-204ENST00000588687 TMCO6Q96DC7 493 aa16.64■□□□□ 0.25
CCDC43-204ENST00000588687 ERP27Q96DN0 273 aa16.64■□□□□ 0.25
CCDC43-204ENST00000588687 HS3ST6Q96QI5 342 aa16.64■□□□□ 0.25
CCDC43-204ENST00000588687 ADOQ96SZ5 270 aa16.64■□□□□ 0.25
CCDC43-204ENST00000588687 FUT8Q9BYC5 575 aa16.64■□□□□ 0.25
CCDC43-204ENST00000588687 NDRG3Q9UGV2 375 aa16.64■□□□□ 0.25
CCDC43-204ENST00000588687 UTS2RQ9UKP6 389 aa16.64■□□□□ 0.25
CCDC43-204ENST00000588687 TMCO1Q9UM00 188 aa16.64■□□□□ 0.25
CCDC43-204ENST00000588687 EIF3LQ9Y262 564 aaKnown RBP16.64■□□□□ 0.25
CCDC43-204ENST00000588687 PCNX3Q9H6A9 2034 aa16.63■□□□□ 0.25
CCDC43-204ENST00000588687 STAB1Q9NY15 2570 aa16.63■□□□□ 0.25
CCDC43-204ENST00000588687 FAM171A2A8MVW0 826 aa16.63■□□□□ 0.25
CCDC43-204ENST00000588687 REM1O75628 298 aa16.63■□□□□ 0.25
CCDC43-204ENST00000588687 CGAP01215 116 aa16.63■□□□□ 0.25
CCDC43-204ENST00000588687 RBP1P09455 135 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms