RNA–Protein interactions for RNA: ENST00000587718.5

CAPNS1-204, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-204ENST00000587718 TRNAU1APQ9NX07 287 aaKnown RBP23.85■■□□□ 1.41
CAPNS1-204ENST00000587718 WARS2Q9UGM6 360 aaKnown RBP23.85■■□□□ 1.41
CAPNS1-204ENST00000587718 MGAT4BQ9UQ53 548 aa23.85■■□□□ 1.41
CAPNS1-204ENST00000587718 RNF6Q9Y252 685 aa23.85■■□□□ 1.41
CAPNS1-204ENST00000587718 RNF215Q9Y6U7 377 aa23.85■■□□□ 1.41
CAPNS1-204ENST00000587718 SH3D21A4FU49 640 aa23.84■■□□□ 1.41
CAPNS1-204ENST00000587718 OR52A4PA6NMU1 304 aa23.84■■□□□ 1.41
CAPNS1-204ENST00000587718 ERI3O43414 337 aaKnown RBP23.84■■□□□ 1.41
CAPNS1-204ENST00000587718 KRT20P35900 424 aa23.84■■□□□ 1.41
CAPNS1-204ENST00000587718 OR1E2P47887 323 aa23.84■■□□□ 1.41
CAPNS1-204ENST00000587718 ST13P50502 369 aaKnown RBP23.84■■□□□ 1.41
CAPNS1-204ENST00000587718 SLAMF1Q13291 335 aa23.84■■□□□ 1.41
CAPNS1-204ENST00000587718 FGD3Q5JSP0 725 aa23.84■■□□□ 1.41
CAPNS1-204ENST00000587718 TOR1AIP1Q5JTV8 583 aa23.84■■□□□ 1.41
CAPNS1-204ENST00000587718 UBE2UQ5VVX9 321 aa23.84■■□□□ 1.41
CAPNS1-204ENST00000587718 TNFAIP8L2Q6P589 184 aaPredicted RBP23.84■■□□□ 1.41
CAPNS1-204ENST00000587718 APH1BQ8WW43 257 aa23.84■■□□□ 1.41
CAPNS1-204ENST00000587718 YIPF6Q96EC8 236 aa23.84■■□□□ 1.41
CAPNS1-204ENST00000587718 ALPK1Q96QP1 1244 aa23.84■■□□□ 1.41
CAPNS1-204ENST00000587718 NRTNQ99748 197 aa23.84■■□□□ 1.41
CAPNS1-204ENST00000587718 DCUN1D5Q9BTE7 237 aa23.84■■□□□ 1.41
CAPNS1-204ENST00000587718 LRIT1Q9P2V4 623 aa23.84■■□□□ 1.41
CAPNS1-204ENST00000587718 PSORS1C1Q9UIG5 152 aa23.84■■□□□ 1.41
CAPNS1-204ENST00000587718 TMCC3Q9ULS5 477 aa23.84■■□□□ 1.41
CAPNS1-204ENST00000587718 ENTPD4Q9Y227 616 aa23.84■■□□□ 1.41
CAPNS1-204ENST00000587718 SH3GLB1Q9Y371 365 aa23.84■■□□□ 1.41
CAPNS1-204ENST00000587718 FAAHO00519 579 aa23.83■■□□□ 1.41
CAPNS1-204ENST00000587718 ASNA1O43681 348 aa23.83■■□□□ 1.41
CAPNS1-204ENST00000587718 NUDT21O43809 227 aaKnown RBP23.83■■□□□ 1.41
CAPNS1-204ENST00000587718 B4GALT2O60909 372 aa23.83■■□□□ 1.41
CAPNS1-204ENST00000587718 TNFSF15O95150 251 aa23.83■■□□□ 1.41
CAPNS1-204ENST00000587718 CCKBRP32239 447 aa23.83■■□□□ 1.41
CAPNS1-204ENST00000587718 GPC1P35052 558 aa23.83■■□□□ 1.41
CAPNS1-204ENST00000587718 EMP3P54852 163 aa23.83■■□□□ 1.41
CAPNS1-204ENST00000587718 CASP9P55211 416 aa23.83■■□□□ 1.41
CAPNS1-204ENST00000587718 MAPK11Q15759 364 aa23.83■■□□□ 1.41
CAPNS1-204ENST00000587718 ZNF829Q3KNS6 432 aaPredicted RBP23.83■■□□□ 1.41
CAPNS1-204ENST00000587718 ZNF770Q6IQ21 691 aaPredicted RBP23.83■■□□□ 1.41
CAPNS1-204ENST00000587718 SLC48A1Q6P1K1 146 aa23.83■■□□□ 1.41
CAPNS1-204ENST00000587718 SLC16A12Q6ZSM3 486 aa23.83■■□□□ 1.41
CAPNS1-204ENST00000587718 ARL14Q8N4G2 192 aa23.83■■□□□ 1.41
CAPNS1-204ENST00000587718 TBC1D15Q8TC07 691 aa23.83■■□□□ 1.41
CAPNS1-204ENST00000587718 LCN9Q8WX39 176 aa23.83■■□□□ 1.41
CAPNS1-204ENST00000587718 ACOT13Q9NPJ3 140 aa23.83■■□□□ 1.41
CAPNS1-204ENST00000587718 CES1P1Q9UKY3 287 aa23.83■■□□□ 1.41
CAPNS1-204ENST00000587718 KLK4Q9Y5K2 254 aa23.83■■□□□ 1.41
CAPNS1-204ENST00000587718 HEATR5BQ9P2D3 2071 aa23.83■■□□□ 1.4
CAPNS1-204ENST00000587718 TEX51A0A1B0GUA7 166 aa23.82■■□□□ 1.4
CAPNS1-204ENST00000587718 B4DGG1 531 aa23.82■■□□□ 1.4
CAPNS1-204ENST00000587718 TMX2-CTNND1H3BSU7 103 aa23.82■■□□□ 1.4
CAPNS1-204ENST00000587718 SERPIND1P05546 499 aa23.82■■□□□ 1.4
CAPNS1-204ENST00000587718 FHP07954 510 aa23.82■■□□□ 1.4
CAPNS1-204ENST00000587718 CSNK2A2P19784 350 aaPredicted RBP23.82■■□□□ 1.4
CAPNS1-204ENST00000587718 EPHA2P29317 976 aa23.82■■□□□ 1.4
CAPNS1-204ENST00000587718 CRISP3P54108 245 aa23.82■■□□□ 1.4
CAPNS1-204ENST00000587718 CXADRP78310 365 aa23.82■■□□□ 1.4
CAPNS1-204ENST00000587718 ZFP36L1Q07352 338 aaKnown RBP23.82■■□□□ 1.4
CAPNS1-204ENST00000587718 RGS1Q08116 209 aa23.82■■□□□ 1.4
CAPNS1-204ENST00000587718 TBCEQ15813 527 aaPredicted RBP23.82■■□□□ 1.4
CAPNS1-204ENST00000587718 DUSP7Q16829 419 aa23.82■■□□□ 1.4
CAPNS1-204ENST00000587718 TAGAPQ8N103 731 aa23.82■■□□□ 1.4
CAPNS1-204ENST00000587718 GPR32P1Q8NGA4 272 aa23.82■■□□□ 1.4
CAPNS1-204ENST00000587718 BORCS5Q969J3 196 aa23.82■■□□□ 1.4
CAPNS1-204ENST00000587718 SCHIP1Q9P0W5 487 aaPredicted RBP23.82■■□□□ 1.4
CAPNS1-204ENST00000587718 ATXN7O15265 892 aaPredicted RBP23.82■■□□□ 1.4
CAPNS1-204ENST00000587718 KLK10O43240 276 aa23.82■■□□□ 1.4
CAPNS1-204ENST00000587718 SLITRK5O94991 958 aa23.82■■□□□ 1.4
CAPNS1-204ENST00000587718 INMTO95050 263 aa23.82■■□□□ 1.4
CAPNS1-204ENST00000587718 MT-ND2P03891 347 aa23.82■■□□□ 1.4
CAPNS1-204ENST00000587718 GABRB1P18505 474 aa23.82■■□□□ 1.4
CAPNS1-204ENST00000587718 TNFRSF1BP20333 461 aa23.82■■□□□ 1.4
CAPNS1-204ENST00000587718 NCBP2P52298 156 aaKnown RBP eCLIP23.82■■□□□ 1.4
CAPNS1-204ENST00000587718 CDC42P60953 191 aa23.82■■□□□ 1.4
CAPNS1-204ENST00000587718 EIF3IQ13347 325 aaKnown RBP23.82■■□□□ 1.4
CAPNS1-204ENST00000587718 TP53BP2Q13625 1128 aa23.82■■□□□ 1.4
CAPNS1-204ENST00000587718 PLD3Q8IV08 490 aa23.82■■□□□ 1.4
CAPNS1-204ENST00000587718 Q8N9G6 341 aaPredicted RBP23.82■■□□□ 1.4
CAPNS1-204ENST00000587718 SMYD1Q8NB12 490 aa23.82■■□□□ 1.4
CAPNS1-204ENST00000587718 GSDMCQ9BYG8 508 aa23.82■■□□□ 1.4
CAPNS1-204ENST00000587718 OR51I1Q9H343 314 aa23.82■■□□□ 1.4
CAPNS1-204ENST00000587718 KLHL31Q9H511 634 aa23.82■■□□□ 1.4
CAPNS1-204ENST00000587718 ZCCHC3Q9NUD5 404 aaKnown RBP23.82■■□□□ 1.4
CAPNS1-204ENST00000587718 CALML5Q9NZT1 146 aa23.82■■□□□ 1.4
CAPNS1-204ENST00000587718 TBC1D29Q9UFV1 150 aa23.82■■□□□ 1.4
CAPNS1-204ENST00000587718 KIF26BQ2KJY2 2108 aa23.81■■□□□ 1.4
CAPNS1-204ENST00000587718 DSPPQ9NZW4 1301 aa23.81■■□□□ 1.4
CAPNS1-204ENST00000587718 A0A0G2JPF8 293 aa23.81■■□□□ 1.4
CAPNS1-204ENST00000587718 A0A1W2PR48 441 aa23.81■■□□□ 1.4
CAPNS1-204ENST00000587718 A6NCN8 305 aa23.81■■□□□ 1.4
CAPNS1-204ENST00000587718 HNRNPCL2B2RXH8 293 aa23.81■■□□□ 1.4
CAPNS1-204ENST00000587718 HNRNPCL3B7ZW38 293 aa23.81■■□□□ 1.4
CAPNS1-204ENST00000587718 PLD2O14939 933 aa23.81■■□□□ 1.4
CAPNS1-204ENST00000587718 SLC28A2O43868 658 aa23.81■■□□□ 1.4
CAPNS1-204ENST00000587718 INHBBP09529 407 aa23.81■■□□□ 1.4
CAPNS1-204ENST00000587718 HNRNPCL4P0DMR1 293 aa23.81■■□□□ 1.4
CAPNS1-204ENST00000587718 F3P13726 295 aa23.81■■□□□ 1.4
CAPNS1-204ENST00000587718 AK4P27144 223 aaPredicted RBP23.81■■□□□ 1.4
CAPNS1-204ENST00000587718 MPIP34949 423 aa23.81■■□□□ 1.4
CAPNS1-204ENST00000587718 UCNP55089 124 aa23.81■■□□□ 1.4
CAPNS1-204ENST00000587718 PRR5P85299 388 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms