RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 SIGLEC12Q96PQ1 595 aa17.67■□□□□ 0.42
DDX39A-204ENST00000586558 STACQ99469 402 aa17.67■□□□□ 0.42
DDX39A-204ENST00000586558 INPP5KQ9BT40 448 aa17.67■□□□□ 0.42
DDX39A-204ENST00000586558 MFRPQ9BY79 579 aa17.67■□□□□ 0.42
DDX39A-204ENST00000586558 DUSP22Q9NRW4 184 aa17.67■□□□□ 0.42
DDX39A-204ENST00000586558 TP53I11O14683 189 aa17.66■□□□□ 0.42
DDX39A-204ENST00000586558 PPM1BO75688 479 aa17.66■□□□□ 0.42
DDX39A-204ENST00000586558 ALOX5P09917 674 aa17.66■□□□□ 0.42
DDX39A-204ENST00000586558 KRT20P35900 424 aa17.66■□□□□ 0.42
DDX39A-204ENST00000586558 CHI3L1P36222 383 aaPredicted RBP17.66■□□□□ 0.42
DDX39A-204ENST00000586558 MAGEA8P43361 318 aa17.66■□□□□ 0.42
DDX39A-204ENST00000586558 MRPS22P82650 360 aaKnown RBP17.66■□□□□ 0.42
DDX39A-204ENST00000586558 TXNL4AP83876 142 aaKnown RBP17.66■□□□□ 0.42
DDX39A-204ENST00000586558 KLF10Q13118 480 aa17.66■□□□□ 0.42
DDX39A-204ENST00000586558 GAB1Q13480 694 aa17.66■□□□□ 0.42
DDX39A-204ENST00000586558 MAPRE2Q15555 327 aa17.66■□□□□ 0.42
DDX39A-204ENST00000586558 INAQ16352 499 aa17.66■□□□□ 0.42
DDX39A-204ENST00000586558 SOWAHCQ53LP3 525 aaPredicted RBP17.66■□□□□ 0.42
DDX39A-204ENST00000586558 ZNF766Q5HY98 468 aa17.66■□□□□ 0.42
DDX39A-204ENST00000586558 SAXO2Q658L1 398 aa17.66■□□□□ 0.42
DDX39A-204ENST00000586558 SPINK14Q6IE38 97 aa17.66■□□□□ 0.42
DDX39A-204ENST00000586558 CDC73Q6P1J9 531 aa17.66■□□□□ 0.42
DDX39A-204ENST00000586558 ZNF621Q6ZSS3 439 aa17.66■□□□□ 0.42
DDX39A-204ENST00000586558 C6orf120Q7Z4R8 191 aa17.66■□□□□ 0.42
DDX39A-204ENST00000586558 PIGWQ7Z7B1 504 aa17.66■□□□□ 0.42
DDX39A-204ENST00000586558 DNAJB8Q8NHS0 232 aa17.66■□□□□ 0.42
DDX39A-204ENST00000586558 MIPOL1Q8TD10 442 aa17.66■□□□□ 0.42
DDX39A-204ENST00000586558 SLC9A6Q92581 669 aa17.66■□□□□ 0.42
DDX39A-204ENST00000586558 JADE3Q92613 823 aa17.66■□□□□ 0.42
DDX39A-204ENST00000586558 OMA1Q96E52 524 aa17.66■□□□□ 0.42
DDX39A-204ENST00000586558 SCMH1Q96GD3 660 aa17.66■□□□□ 0.42
DDX39A-204ENST00000586558 PHF12Q96QT6 1004 aa17.66■□□□□ 0.42
DDX39A-204ENST00000586558 SECISBP2Q96T21 854 aaKnown RBP17.66■□□□□ 0.42
DDX39A-204ENST00000586558 SLC35A5Q9BS91 424 aa17.66■□□□□ 0.42
DDX39A-204ENST00000586558 NMUR2Q9GZQ4 415 aa17.66■□□□□ 0.42
DDX39A-204ENST00000586558 MRTO4Q9UKD2 239 aaKnown RBP17.66■□□□□ 0.42
DDX39A-204ENST00000586558 KLF13Q9Y2Y9 288 aaPredicted RBP17.66■□□□□ 0.42
DDX39A-204ENST00000586558 PCDHGB3Q9Y5G1 929 aa17.66■□□□□ 0.42
DDX39A-204ENST00000586558 CAPN7Q9Y6W3 813 aa17.66■□□□□ 0.42
DDX39A-204ENST00000586558 CNTRLQ7Z7A1 2325 aa17.66■□□□□ 0.42
DDX39A-204ENST00000586558 TNRC6AQ8NDV7 1962 aaKnown RBP17.66■□□□□ 0.42
DDX39A-204ENST00000586558 A0A096LPI6 279 aa17.65■□□□□ 0.42
DDX39A-204ENST00000586558 ASPDHA6ND91 283 aa17.65■□□□□ 0.42
DDX39A-204ENST00000586558 DUXAA6NLW8 204 aa17.65■□□□□ 0.42
DDX39A-204ENST00000586558 EIF4E1BA6NMX2 242 aaKnown RBP17.65■□□□□ 0.42
DDX39A-204ENST00000586558 ANGPT2O15123 496 aa17.65■□□□□ 0.42
DDX39A-204ENST00000586558 NME2P1O60361 137 aa17.65■□□□□ 0.42
DDX39A-204ENST00000586558 ANP32DO95626 131 aa17.65■□□□□ 0.42
DDX39A-204ENST00000586558 FAM107AO95990 144 aa17.65■□□□□ 0.42
DDX39A-204ENST00000586558 SP1P08047 785 aa17.65■□□□□ 0.42
DDX39A-204ENST00000586558 SNRPB2P08579 225 aaKnown RBP17.65■□□□□ 0.42
DDX39A-204ENST00000586558 ACP2P11117 423 aa17.65■□□□□ 0.42
DDX39A-204ENST00000586558 NME2P22392 152 aa17.65■□□□□ 0.42
DDX39A-204ENST00000586558 GABRA3P34903 492 aa17.65■□□□□ 0.42
DDX39A-204ENST00000586558 CDKN2CP42773 168 aa17.65■□□□□ 0.42
DDX39A-204ENST00000586558 ST13P50502 369 aaKnown RBP17.65■□□□□ 0.42
DDX39A-204ENST00000586558 PSMD4P55036 377 aaKnown RBP17.65■□□□□ 0.42
DDX39A-204ENST00000586558 RPP38P78345 283 aaKnown RBP17.65■□□□□ 0.42
DDX39A-204ENST00000586558 UBAP2LQ14157 1087 aaKnown RBP17.65■□□□□ 0.42
DDX39A-204ENST00000586558 DECR1Q16698 335 aa17.65■□□□□ 0.42
DDX39A-204ENST00000586558 PLEKHN1Q494U1 663 aaPredicted RBP17.65■□□□□ 0.42
DDX39A-204ENST00000586558 SLC25A25Q6KCM7 469 aa17.65■□□□□ 0.42
DDX39A-204ENST00000586558 RPUSD3Q6P087 351 aaKnown RBP17.65■□□□□ 0.42
DDX39A-204ENST00000586558 SLC2A7Q6PXP3 512 aa17.65■□□□□ 0.42
DDX39A-204ENST00000586558 GK5Q6ZS86 529 aa17.65■□□□□ 0.42
DDX39A-204ENST00000586558 PTRH1Q86Y79 214 aaKnown RBP17.65■□□□□ 0.42
DDX39A-204ENST00000586558 PRR22Q8IZ63 422 aa17.65■□□□□ 0.42
DDX39A-204ENST00000586558 SLC16A11Q8NCK7 471 aa17.65■□□□□ 0.42
DDX39A-204ENST00000586558 PSD4Q8NDX1 1056 aa17.65■□□□□ 0.42
DDX39A-204ENST00000586558 FAM13CQ8NE31 585 aa17.65■□□□□ 0.42
DDX39A-204ENST00000586558 GPR151Q8TDV0 419 aa17.65■□□□□ 0.42
DDX39A-204ENST00000586558 PAQR8Q8TEZ7 354 aa17.65■□□□□ 0.42
DDX39A-204ENST00000586558 TMBIM1Q969X1 311 aa17.65■□□□□ 0.42
DDX39A-204ENST00000586558 C16orf58Q96GQ5 468 aa17.65■□□□□ 0.42
DDX39A-204ENST00000586558 SLC35G5Q96KT7 338 aa17.65■□□□□ 0.42
DDX39A-204ENST00000586558 CCT8L2Q96SF2 557 aa17.65■□□□□ 0.42
DDX39A-204ENST00000586558 PIGUQ9H490 435 aa17.65■□□□□ 0.42
DDX39A-204ENST00000586558 CNIH4Q9P003 139 aa17.65■□□□□ 0.42
DDX39A-204ENST00000586558 LEF1Q9UJU2 399 aaPredicted RBP17.65■□□□□ 0.42
DDX39A-204ENST00000586558 CBLCQ9ULV8 474 aa17.65■□□□□ 0.42
DDX39A-204ENST00000586558 ARL2BPQ9Y2Y0 163 aa17.65■□□□□ 0.42
DDX39A-204ENST00000586558 PCDHGA10Q9Y5H3 936 aa17.65■□□□□ 0.42
DDX39A-204ENST00000586558 OR6C70A6NIJ9 312 aa17.64■□□□□ 0.41
DDX39A-204ENST00000586558 REM1O75628 298 aa17.64■□□□□ 0.41
DDX39A-204ENST00000586558 SORBS2O94875 1100 aaKnown RBP17.64■□□□□ 0.41
DDX39A-204ENST00000586558 KCNH1O95259 989 aa17.64■□□□□ 0.41
DDX39A-204ENST00000586558 KRT75O95678 551 aa17.64■□□□□ 0.41
DDX39A-204ENST00000586558 GSNP06396 782 aa17.64■□□□□ 0.41
DDX39A-204ENST00000586558 PTPN6P29350 595 aa17.64■□□□□ 0.41
DDX39A-204ENST00000586558 IL12BP29460 328 aa17.64■□□□□ 0.41
DDX39A-204ENST00000586558 PIGAP37287 484 aa17.64■□□□□ 0.41
DDX39A-204ENST00000586558 MAN2A2P49641 1150 aa17.64■□□□□ 0.41
DDX39A-204ENST00000586558 ANXA11P50995 505 aaKnown RBP17.64■□□□□ 0.41
DDX39A-204ENST00000586558 EFR3AQ14156 821 aa17.64■□□□□ 0.41
DDX39A-204ENST00000586558 DUSP5Q16690 384 aa17.64■□□□□ 0.41
DDX39A-204ENST00000586558 LRIF1Q5T3J3 769 aa17.64■□□□□ 0.41
DDX39A-204ENST00000586558 DNAJC14Q6Y2X3 702 aaPredicted RBP17.64■□□□□ 0.41
DDX39A-204ENST00000586558 NUP54Q7Z3B4 507 aa17.64■□□□□ 0.41
DDX39A-204ENST00000586558 MDGA2Q7Z553 956 aa17.64■□□□□ 0.41
DDX39A-204ENST00000586558 WDR53Q7Z5U6 358 aaPredicted RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms