RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 TUBA3CQ13748 450 aa13.47□□□□□ -0.25
SCAMP4-209ENST00000585335 CT45A2Q5DJT8 189 aa13.47□□□□□ -0.25
SCAMP4-209ENST00000585335 LRIF1Q5T3J3 769 aa13.47□□□□□ -0.25
SCAMP4-209ENST00000585335 ATAD3BQ5T9A4 648 aa13.47□□□□□ -0.25
SCAMP4-209ENST00000585335 TUBA3EQ6PEY2 450 aa13.47□□□□□ -0.25
SCAMP4-209ENST00000585335 IL20RBQ6UXL0 311 aa13.47□□□□□ -0.25
SCAMP4-209ENST00000585335 RTL4Q6ZR62 310 aa13.47□□□□□ -0.25
SCAMP4-209ENST00000585335 DHDDSQ86SQ9 333 aa13.47□□□□□ -0.25
SCAMP4-209ENST00000585335 DPP10Q8N608 796 aa13.47□□□□□ -0.25
SCAMP4-209ENST00000585335 EXD3Q8N9H8 876 aa13.47□□□□□ -0.25
SCAMP4-209ENST00000585335 FAM13CQ8NE31 585 aa13.47□□□□□ -0.25
SCAMP4-209ENST00000585335 FBXO30Q8TB52 745 aa13.47□□□□□ -0.25
SCAMP4-209ENST00000585335 SPACA9Q96E40 222 aaPredicted RBP13.47□□□□□ -0.25
SCAMP4-209ENST00000585335 OMA1Q96E52 524 aa13.47□□□□□ -0.25
SCAMP4-209ENST00000585335 SGCZQ96LD1 299 aa13.47□□□□□ -0.25
SCAMP4-209ENST00000585335 YIPF4Q9BSR8 244 aa13.47□□□□□ -0.25
SCAMP4-209ENST00000585335 CCDC106Q9BWC9 280 aa13.47□□□□□ -0.25
SCAMP4-209ENST00000585335 TRIM4Q9C037 500 aa13.47□□□□□ -0.25
SCAMP4-209ENST00000585335 PAIP1Q9H074 479 aaKnown RBP13.47□□□□□ -0.25
SCAMP4-209ENST00000585335 PIGUQ9H490 435 aa13.47□□□□□ -0.25
SCAMP4-209ENST00000585335 TIMMDC1Q9NPL8 285 aa13.47□□□□□ -0.25
SCAMP4-209ENST00000585335 SLC52A3Q9NQ40 469 aa13.47□□□□□ -0.25
SCAMP4-209ENST00000585335 ZNF71Q9NQZ8 489 aaPredicted RBP13.47□□□□□ -0.25
SCAMP4-209ENST00000585335 DUSP22Q9NRW4 184 aa13.47□□□□□ -0.25
SCAMP4-209ENST00000585335 EXD2Q9NVH0 621 aa13.47□□□□□ -0.25
SCAMP4-209ENST00000585335 GPATCH2Q9NW75 528 aa13.47□□□□□ -0.25
SCAMP4-209ENST00000585335 GID8Q9NWU2 228 aa13.47□□□□□ -0.25
SCAMP4-209ENST00000585335 PLA2G3Q9NZ20 509 aa13.47□□□□□ -0.25
SCAMP4-209ENST00000585335 CBLCQ9ULV8 474 aa13.47□□□□□ -0.25
SCAMP4-209ENST00000585335 CPAMD8Q8IZJ3 1885 aa13.46□□□□□ -0.25
SCAMP4-209ENST00000585335 TRAV17A0A0B4J275 112 aa13.46□□□□□ -0.25
SCAMP4-209ENST00000585335 EVPLLA8MZ36 301 aa13.46□□□□□ -0.25
SCAMP4-209ENST00000585335 MRASO14807 208 aa13.46□□□□□ -0.25
SCAMP4-209ENST00000585335 ATXN7O15265 892 aaPredicted RBP13.46□□□□□ -0.25
SCAMP4-209ENST00000585335 ASNA1O43681 348 aa13.46□□□□□ -0.25
SCAMP4-209ENST00000585335 HS6ST1O60243 411 aa13.46□□□□□ -0.25
SCAMP4-209ENST00000585335 REM1O75628 298 aa13.46□□□□□ -0.25
SCAMP4-209ENST00000585335 PPM1BO75688 479 aa13.46□□□□□ -0.25
SCAMP4-209ENST00000585335 OR6B1O95007 311 aa13.46□□□□□ -0.25
SCAMP4-209ENST00000585335 NADKO95544 446 aaPredicted RBP13.46□□□□□ -0.25
SCAMP4-209ENST00000585335 AK1P00568 194 aa13.46□□□□□ -0.25
SCAMP4-209ENST00000585335 F10P00742 488 aa13.46□□□□□ -0.25
SCAMP4-209ENST00000585335 NPPAP01160 153 aa13.46□□□□□ -0.25
SCAMP4-209ENST00000585335 ACP2P11117 423 aa13.46□□□□□ -0.25
SCAMP4-209ENST00000585335 COX4I1P13073 169 aa13.46□□□□□ -0.25
SCAMP4-209ENST00000585335 ABCD3P28288 659 aa13.46□□□□□ -0.25
SCAMP4-209ENST00000585335 PRDX6P30041 224 aa13.46□□□□□ -0.25
SCAMP4-209ENST00000585335 CD96P40200 585 aa13.46□□□□□ -0.25
SCAMP4-209ENST00000585335 TNFSF10P50591 281 aa13.46□□□□□ -0.25
SCAMP4-209ENST00000585335 POU6F2P78424 691 aaPredicted RBP13.46□□□□□ -0.25
SCAMP4-209ENST00000585335 PSG6Q00889 435 aa13.46□□□□□ -0.25
SCAMP4-209ENST00000585335 EFR3AQ14156 821 aa13.46□□□□□ -0.25
SCAMP4-209ENST00000585335 OR1C1Q15619 314 aa13.46□□□□□ -0.25
SCAMP4-209ENST00000585335 TRMT5Q32P41 509 aaKnown RBP13.46□□□□□ -0.25
SCAMP4-209ENST00000585335 PAGE3Q5JUK9 113 aa13.46□□□□□ -0.25
SCAMP4-209ENST00000585335 REP15Q6BDI9 236 aa13.46□□□□□ -0.25
SCAMP4-209ENST00000585335 NPSR1Q6W5P4 371 aa13.46□□□□□ -0.25
SCAMP4-209ENST00000585335 CLEC4FQ8N1N0 589 aa13.46□□□□□ -0.25
SCAMP4-209ENST00000585335 GOLM1Q8NBJ4 401 aa13.46□□□□□ -0.25
SCAMP4-209ENST00000585335 SLC16A11Q8NCK7 471 aa13.46□□□□□ -0.25
SCAMP4-209ENST00000585335 MIPOL1Q8TD10 442 aa13.46□□□□□ -0.25
SCAMP4-209ENST00000585335 ZFP90Q8TF47 636 aa13.46□□□□□ -0.25
SCAMP4-209ENST00000585335 HOXB13Q92826 284 aaPredicted RBP13.46□□□□□ -0.25
SCAMP4-209ENST00000585335 C16orf58Q96GQ5 468 aa13.46□□□□□ -0.25
SCAMP4-209ENST00000585335 BTBD2Q9BX70 525 aa13.46□□□□□ -0.25
SCAMP4-209ENST00000585335 TRIM45Q9H8W5 580 aaPredicted RBP13.46□□□□□ -0.25
SCAMP4-209ENST00000585335 TPT1P8Q9HAU6 139 aa13.46□□□□□ -0.25
SCAMP4-209ENST00000585335 ZBTB20Q9HC78 741 aaPredicted RBP13.46□□□□□ -0.25
SCAMP4-209ENST00000585335 THUMPD1Q9NXG2 353 aaKnown RBP13.46□□□□□ -0.25
SCAMP4-209ENST00000585335 ANKRD10Q9NXR5 420 aa13.46□□□□□ -0.25
SCAMP4-209ENST00000585335 PCDHB14Q9Y5E9 798 aa13.46□□□□□ -0.25
SCAMP4-209ENST00000585335 TMEM247A6NEH6 219 aa13.45□□□□□ -0.26
SCAMP4-209ENST00000585335 CLIC1O00299 241 aa13.45□□□□□ -0.26
SCAMP4-209ENST00000585335 NME6O75414 186 aaPredicted RBP13.45□□□□□ -0.26
SCAMP4-209ENST00000585335 SLC25A12O75746 678 aa13.45□□□□□ -0.26
SCAMP4-209ENST00000585335 PDGFAP04085 211 aa13.45□□□□□ -0.26
SCAMP4-209ENST00000585335 ATP6V1C1P21283 382 aa13.45□□□□□ -0.26
SCAMP4-209ENST00000585335 PIGAP37287 484 aa13.45□□□□□ -0.26
SCAMP4-209ENST00000585335 LY6DQ14210 128 aa13.45□□□□□ -0.26
SCAMP4-209ENST00000585335 NTRK2Q16620 822 aa13.45□□□□□ -0.26
SCAMP4-209ENST00000585335 DUSP5Q16690 384 aa13.45□□□□□ -0.26
SCAMP4-209ENST00000585335 ZNF791Q3KP31 576 aaPredicted RBP13.45□□□□□ -0.26
SCAMP4-209ENST00000585335 NUP54Q7Z3B4 507 aa13.45□□□□□ -0.26
SCAMP4-209ENST00000585335 C16orf62Q7Z3J2 963 aa13.45□□□□□ -0.26
SCAMP4-209ENST00000585335 WDR53Q7Z5U6 358 aaPredicted RBP13.45□□□□□ -0.26
SCAMP4-209ENST00000585335 RNF130Q86XS8 419 aa13.45□□□□□ -0.26
SCAMP4-209ENST00000585335 PRR22Q8IZ63 422 aa13.45□□□□□ -0.26
SCAMP4-209ENST00000585335 POU5F2Q8N7G0 328 aa13.45□□□□□ -0.26
SCAMP4-209ENST00000585335 TEX19Q8NA77 164 aa13.45□□□□□ -0.26
SCAMP4-209ENST00000585335 TMEM178AQ8NBL3 297 aa13.45□□□□□ -0.26
SCAMP4-209ENST00000585335 FAM98AQ8NCA5 519 aaKnown RBP13.45□□□□□ -0.26
SCAMP4-209ENST00000585335 CDS1Q92903 461 aa13.45□□□□□ -0.26
SCAMP4-209ENST00000585335 TMBIM1Q969X1 311 aa13.45□□□□□ -0.26
SCAMP4-209ENST00000585335 TMCO6Q96DC7 493 aa13.45□□□□□ -0.26
SCAMP4-209ENST00000585335 RMND5BQ96G75 393 aaPredicted RBP13.45□□□□□ -0.26
SCAMP4-209ENST00000585335 COL21A1Q96P44 957 aa13.45□□□□□ -0.26
SCAMP4-209ENST00000585335 OR7D2Q96RA2 312 aa13.45□□□□□ -0.26
SCAMP4-209ENST00000585335 SH3GL1Q99961 368 aa13.45□□□□□ -0.26
SCAMP4-209ENST00000585335 G6PC3Q9BUM1 346 aa13.45□□□□□ -0.26
SCAMP4-209ENST00000585335 OR51I1Q9H343 314 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms